OOIR: Observatory of International Research

Papers

(The median citation count of BMC Molecular and Cell Biology is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-03-01 to 2024-03-01.)

Article	Citations
Avian eggshell biomineralization: an update on its structure, mineralogy and protein tool kit	53
Differential contribution of p300 and CBP to regulatory element acetylation in mESCs	44
In silico analysis of non-synonymous single nucleotide polymorphisms (nsSNPs) in the human GJA3 gene associated with congenital cataract	38
PGRMC1 phosphorylation affects cell shape, motility, glycolysis, mitochondrial form and function, and tumor growth	32
Compression enhances invasive phenotype and matrix degradation of breast cancer cells via Piezo1 activation	27
LncRNA IMFlnc1 promotes porcine intramuscular adipocyte adipogenesis by sponging miR-199a-5p to up-regulate CAV-1	25
Effect of bacterial infection on sperm quality and DNA fragmentation in subfertile men with Leukocytospermia	24
Exosomal miR-200c-3p negatively regulates the migration and invasion of lipopolysaccharide (LPS)-stimulated colorectal cancer (CRC)	24
Bacterial cell growth is arrested by violet and blue, but not yellow light excitation during fluorescence microscopy	22
A long non-coding RNA, HOTAIR, promotes cartilage degradation in osteoarthritis by inhibiting WIF-1 expression and activating Wnt pathway	21
LncRNA LUCAT1/miR-181a-5p axis promotes proliferation and invasion of breast cancer via targeting KLF6 and KLF15	20
The mitochondrial outer membrane protein SYNJ2BP interacts with the cell adhesion molecule TMIGD1 and can recruit it to mitochondria	20
Transcriptome and proteome profiling reveal complementary scavenger and immune features of rat liver sinusoidal endothelial cells and liver macrophages	20
circRNA_0005529 facilitates growth and metastasis of gastric cancer via regulating miR-527/Sp1 axis	19
Alix and Syntenin-1 direct amyloid precursor protein trafficking into extracellular vesicles	19
Global transcriptome profile of the developmental principles of in vitro iPSC-to-motor neuron differentiation	17
Molecular docking and machine learning analysis of Abemaciclib in colon cancer	17
Ommochrome pathway genes kynurenine 3-hydroxylase and cardinal participate in eye pigmentation in Plutella xylostella	17
Intercellular transfer of mitochondrial DNA carrying metastasis-enhancing pathogenic mutations from high- to low-metastatic tumor cells and stromal cells via extracellular vesicles	16
PGRMC1 effects on metabolism, genomic mutation and CpG methylation imply crucial roles in animal biology and disease	16
Impact of uORFs in mediating regulation of translation in stress conditions	16
Analysis of G-quadruplexes upstream of herpesvirus miRNAs: evidence of G-quadruplex mediated regulation of KSHV miR-K12–1-9,11 cluster and HCMV miR-US33	15
Alterations in the chondrocyte surfaceome in response to pro-inflammatory cytokines	15
Identification and characterization of the LRR repeats in plant LRR-RLKs	15
The primary cilium dampens proliferative signaling and represses a G2/M transcriptional network in quiescent myoblasts	14

Isolation, culture, and characterization of chicken intestinal epithelial cells	14
LncRNA MALAT1 exhibits positive effects on nucleus pulposus cell biology in vivo and in vitro by sponging miR-503	13
Tanshinone IIA alleviates hypoxia/reoxygenation induced cardiomyocyte injury via lncRNA AK003290/miR-124-5p signaling	13
Functional analyses of miRNA-146b-5p during myogenic proliferation and differentiation in chicken myoblasts	13
Retinoic acid receptor-related orphan receptor α reduces lipid droplets by upregulating neutral cholesterol ester hydrolase 1 in macrophages	13
Identification of a druggable binding pocket in the spike protein reveals a key site for existing drugs potentially capable of combating Covid-19 infectivity	13
Designing a chimeric subunit vaccine for influenza virus, based on HA2, M2e and CTxB: a bioinformatics study	12
Complex II subunit SDHD is critical for cell growth and metabolism, which can be partially restored with a synthetic ubiquinone analog	12
Chromatin structure in cancer	11
Estrogen suppresses SOX9 and activates markers of female development in a human testis-derived cell line	11
ILK supports RhoA/ROCK-mediated contractility of human intestinal epithelial crypt cells by inducing the fibrillogenesis of endogenous soluble fibronectin during the spreading process	11
Responsiveness of human bronchial fibroblasts and epithelial cells from asthmatic and non-asthmatic donors to the transforming growth factor-β1 in epithelial-mesenchymal trophic unit model	11
New genotypes of Helicobacter Pylori VacA d-region identified from global strains	10
Identification of the molecular mechanism and diagnostic biomarkers in the thoracic ossification of the ligamentum flavum using metabolomics and transcriptomics	10
ESCRT machinery plays a role in microautophagy in yeast	9
EphB4/ TNFR2/ERK/MAPK signaling pathway comprises a signaling axis to mediate the positive effect of TNF-α on osteogenic differentiation	9
Characterization of the interactions between Codanin-1 and C15Orf41, two proteins implicated in congenital dyserythropoietic anemia type I disease	9
MazEF-rifampicin interaction suggests a mechanism for rifampicin induced inhibition of persisters	9
Glutantβase: a database for improving the rational design of glucose-tolerant β-glucosidases	9
Intracellular pH regulation: characterization and functional investigation of H+ transporters in Stylophora pistillata	9
Selecting suitable reference genes for qPCR normalization: a comprehensive analysis in MCF-7 breast cancer cell line	9
Uncarboxylated osteocalcin alleviates the inhibitory effect of high glucose on osteogenic differentiation of mouse bone marrow–derived mesenchymal stem cells by regulating TP63	9
BACE2 degradation is mediated by both the proteasome and lysosome pathways	9
Extracellular matrix alterations in the skin of patients affected by psoriasis	9
Klotho is regulated by transcription factor Sp1 in renal tubular epithelial cells	9
Mutational landscape and in silico structure models of SARS-CoV-2 spike receptor binding domain reveal key molecular determinants for virus-host interaction	9
IL6/sIL6R regulates TNFα-inflammatory response in synovial fibroblasts through modulation of transcriptional and post-transcriptional mechanisms	9
The local hypothalamic–pituitary–adrenal axis in cultured human dermal papilla cells	9
Effect of Voacamine upon inhibition of hypoxia induced fatty acid synthesis in a rat model of methyln-nitrosourea induced mammary gland carcinoma	9
CHD9 upregulates RUNX2 and has a potential role in skeletal evolution	9
Scl-Ab reverts pro-osteoclastogenic signalling and resorption in estrogen deficient osteocytes	8
Regulatory effect of heat shock transcription factor-1 gene on heat shock proteins and its transcriptional regulation analysis in small abalone Haliotis diversicolor	8
Identification of biomarkers for the accurate and sensitive diagnosis of three bacterial pneumonia pathogens using in silico approaches	8
Fetal sex modulates placental microRNA expression, potential microRNA-mRNA interactions, and levels of amino acid transporter expression and substrates: INFAT study subpopulation analysis of n-3 LCPUF	8
Role of tumor cell senescence in non-professional phagocytosis and cell-in-cell structure formation	8
Upregulation of CCT3 predicts poor prognosis and promotes cell proliferation via inhibition of ferroptosis and activation of AKT signaling in lung adenocarcinoma	8
GSDB: a database of 3D chromosome and genome structures reconstructed from Hi-C data	8
NanoSIMS observations of mouse retinal cells reveal strict metabolic controls on nitrogen turnover	8
sFLT01 modulates invasion and metastasis in prostate cancer DU145 cells by inhibition of VEGF/GRP78/MMP2&9 axis	8
Optimization of fuzzy c-means (FCM) clustering in cytology image segmentation using the gray wolf algorithm	8
An interaction of heart disease-associated proteins POPDC1/2 with XIRP1 in transverse tubules and intercalated discs	8
Egr-1 mediates low-dose arecoline induced human oral mucosa fibroblast proliferation via transactivation of Wnt5a expression	8
Effects of temperature on proliferation of myoblasts from donor piglets with different thermoregulatory maturities	7
Spinoculation and retronectin highly enhance the gene transduction efficiency of Mucin-1-specific chimeric antigen receptor (CAR) in human primary T cells	7
Conserved paradoxical relationships among the evolutionary, structural and expressional features of KRAB zinc-finger proteins reveal their special functional characteristics	7
Nucleolar localization of the ErbB3 receptor as a new target in glioblastoma	7
Uncarboxylated osteocalcin promotes proliferation and metastasis of MDA-MB-231 cells through TGF-β/SMAD3 signaling pathway	7
Protein kinase C regulates organic anion transporter 1 through phosphorylating ubiquitin ligase Nedd4–2	7
High miRNA-378 expression has high diagnostic values for pulmonary tuberculosis and predicts adverse outcomes	7
Identifying nucleic acid-associated proteins in Mycobacterium smegmatis by mass spectrometry-based proteomics	6

Activated TRPA1 plays a therapeutic role in TMZ resistance in glioblastoma by altering mitochondrial dynamics	6
Ribosomal protein RPL5 regulates colon cancer cell proliferation and migration through MAPK/ERK signaling pathway	6
Systematic study of single-cell isolation from musculoskeletal tissues for single-sell sequencing	6
Basic biochemical characterization of cytosolic enzymes in thymidine nucleotide synthesis in adult rat tissues: implications for tissue specific mitochondrial DNA depletion and deoxynucleoside-based t	6
Diazoxide affects mitochondrial bioenergetics by the opening of mKATP channel on submicromolar scale	6
Robust high-throughput assays to assess discrete steps in ubiquitination and related cascades	6
Genotype-determined EGFR-RTK heterodimerization and its effects on drug resistance in lung Cancer treatment revealed by molecular dynamics simulations	6
An integrative analysis of DNA methylation and transcriptome showed the dysfunction of MAPK pathway was involved in the damage of human chondrocyte induced by T-2 toxin	6
An Endostatin-lentivirus (ES-LV)-EPC gene therapy agent for suppression of neovascularization in oxygen-induced retinopathy rat model	6
Molecular effects of dADD1 misexpression in chromatin organization and transcription	6
Probing contacts of inhibitor locked in transition states in the catalytic triad of DENV2 type serine protease and its mutants by 1H, 19F and 15 N NMR spectroscopy	6
IMPARO: inferring microbial interactions through parameter optimisation	5
Long non-coding RNA TUG1 promotes proliferation and migration in PDGF-BB-stimulated HASMCs by regulating miR-216a-3p/SMURF2 axis	5
Structural insights into the non-inhibitory mechanism of the anti-EGFR EgB4 nanobody	5
KDM6A mutations promote acute cytoplasmic DNA release, DNA damage response and mitosis defects	5
Intracellular targeting of Cisd2/Miner1 to the endoplasmic reticulum	5
Mechanism of hERG inhibition by gating-modifier toxin, APETx1, deduced by functional characterization	5
A novel in vitro Caenorhabditis elegans transcription system	5
In silico prediction, characterization, docking studies and molecular dynamics simulation of human p97 in complex with p37 cofactor	5
Platelet adhesion and aggregate formation controlled by immobilised and soluble VWF	5
The 3-O sulfation of heparan sulfate proteoglycans contributes to the cellular internalization of tau aggregates	5
HMGB1 mediates lipopolysaccharide-induced macrophage autophagy and pyroptosis	5
Determinants of translation efficiency in the evolutionarily-divergent protist Trichomonas vaginalis	5
Decreased Krüppel-like factor 4 in adenomyosis impairs decidualization by repressing autophagy in human endometrial stromal cells	5
The dual role of Nrf2 in melanoma: a systematic review	4
The Glypican proteoglycans show intrinsic interactions with Wnt-3a in human prostate cancer cells that are not always associated with cascade activation	4
Systematic identification of non-canonical transcription factor motifs	4
Interaction between NSMCE4A and GPS1 links the SMC5/6 complex to the COP9 signalosome	4
Impacts of drug resistance mutations on the structural asymmetry of the HIV-2 protease	4
Mesenchymal stem cells- derived exosomes inhibit the expression of Aquaporin-5 and EGFR in HCT-116 human colorectal carcinoma cell line	4
SH3BGRL3 binds to myosin 1c in a calcium dependent manner and modulates migration in the MDA-MB-231 cell line	4
Evaluation of selected carotenoids of Lycopersicon esculentum variants as therapeutic targets for ‘Alzheimer’s disease: an in silico approach	4
Assessing nucleic acid binding activity of four dinoflagellate cold shock domain proteins from Symbiodinium kawagutii and Lingulodinium polyedra	4
SPRD: a surface plasmon resonance database of common factors for better experimental planning	4
Cyr61 promotes Schwann cell proliferation and migration via αvβ3 integrin	4
Cathepsin K regulates localization and secretion of Tartrate-Resistant Acid Phosphatase (TRAP) in TRAP-overexpressing MDA-MB-231 breast cancer cells	4
Exonuclease resistant 18S and 25S ribosomal RNA components in yeast are possibly newly transcribed by RNA polymerase II	4
Exogenous supply of Hsp47 triggers fibrillar collagen deposition in skin cell cultures in vitro	4
Increased expression of MUSASHI1 in epithelial breast cancer cells is due to down regulation of miR-125b	4
WRN modulates translation by influencing nuclear mRNA export in HeLa cancer cells	4
Sperm capacitation and transcripts levels are altered by in vitro THC exposure	3
Novel leukocyte-depleted platelet-rich plasma-based skin equivalent as an in vitro model of chronic wounds: a preliminary study	3
MAPKAPK5-AS1 drives the progression of hepatocellular carcinoma via regulating miR-429/ZEB1 axis	3
Systemic administration of c-Kit+ cells diminished pulmonary and vascular inflammation in rat model of chronic asthma	3
Comparative transcriptomic analysis reveals gene regulation mediated by caspase activity in a chordate organism	3
Revealing the key point of the temperature stress response of Arthrospira platensis C1 at the interconnection of C- and N- metabolism by proteome analyses and PPI networking	3
Substance P enhances the local activation of NK1R-expressing c-kit+ cardiac progenitor cells in right atrium of ischemia/reperfusion-injured heart	3
Analyses of the folding sites of irregular β-trefoil fold proteins through sequence-based techniques and Gō-model simulations	3
Effects of the media conditioned by various macrophage subtypes derived from THP-1 cells on tunneling nanotube formation in pancreatic cancer cells	3
Angiogenic ability of human endothelial cells was decreased following senescence induction with hydrogen peroxide: possible role of vegfr-2/akt-1 signaling pathway	3
Normal seminal plasma could preserve human spermatozoa against cryopreservation damages in Oligozoospermic patients	3
Correction to: Avian eggshell biomineralization: an update on its structure, mineralogy and protein tool kit	3
Urine-derived mesenchymal stem cells-derived exosomes enhances survival and proliferation of aging retinal ganglion cells	3
High levels of follicular fluid testosterone could impair oocyte developmental competency via affecting aryl hydrocarbon receptor pathway in PCOS patients	3
The PP1 regulator PPP1R2 coordinately regulates AURKA and PP1 to control centrosome phosphorylation and maintain central spindle architecture	3
Metabolic analysis of the regulatory mechanism of sugars on secondary flowering in Magnolia	3
Methodology for comprehensive cell-level analysis of wound healing experiments using deep learning in MATLAB	3
Influence of mechanical and TGF-β3 stimulation on the tenogenic differentiation of tonsil-derived mesenchymal stem cells	3
A fast, efficient and high-throughput procedure involving laser microdissection and RT droplet digital PCR for tissue-specific expression profiling of rice roots	3
Polymerization of Bacillus subtilis MreB on a lipid membrane reveals lateral co-polymerization of MreB paralogs and strong effects of cations on filament formation	3
MDMX is essential for the regulation of p53 protein levels in the absence of a functional MDM2 C-terminal tail	3
Lncap-AI prostate cancer cell line establishment by Flutamide and androgen-free environment to promote cell adherent	3
Ceramide induces pyroptosis through TXNIP/NLRP3/GSDMD pathway in HUVECs	3
Cell-in-cell phenomenon: leukocyte engulfment by non-tumorigenic cells and cancer cell lines	3