OOIR: Observatory of International Research

Papers

(The TQCC of Plant Phenomics is 9. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)

Article	Citations
Robust High-Throughput Phenotyping with Deep Segmentation Enabled by a Web-Based Annotator	57
A Mechanistic Model for Estimating Rice Photosynthetic Capacity and Stomatal Conductance from Sun-Induced Chlorophyll Fluorescence	50
Phenotyping of Silique Morphology in Oilseed Rape Using Skeletonization with Hierarchical Segmentation	47
The Importance of Using Realistic 3D Canopy Models to Calculate Light Interception in the Field	47
Rice Plant Counting, Locating, and Sizing Method Based on High-Throughput UAV RGB Images	43
Deep Learning Enables Instant and Versatile Estimation of Rice Yield Using Ground-Based RGB Images	40
Enhancing Green Fraction Estimation in Rice and Wheat Crops: A Self-Supervised Deep Learning Semantic Segmentation Approach	39
Noninvasive Abiotic Stress Phenotyping of Vascular Plant in Each Vegetative Organ View	36
Geographic-Scale Coffee Cherry Counting with Smartphones and Deep Learning	36
Dynamic maize true leaf area index retrieval with KGCNN and TL and integrated 3D radiative transfer modeling for crop phenotyping	35
Practical Identifiability of Plant Growth Models: A Unifying Framework and Its Specification for Three Local Indices	33
Enabling Breeding Selection for Biomass in Slash Pine Using UAV-Based Imaging	32
Identifying Regenerated Saplings by Stratifying Forest Overstory Using Airborne LiDAR Data	32
Rape Yield Estimation Considering Non-Foliar Green Organs Based on the General Crop Growth Model	28
Visualization and Quantitative Evaluation of Functional Structures of Soybean Root Nodules via Synchrotron X-ray Imaging	27
Maturity Classification of Rapeseed Using Hyperspectral Image Combined with Machine Learning	25
Detection and Reconstruction of Passion Fruit Branches via CNN and Bidirectional Sector Search	25
EasyDAM_V2: Efficient Data Labeling Method for Multishape, Cross-Species Fruit Detection	24
Drone-Based Digital Phenotyping to Evaluating Relative Maturity, Stand Count, and Plant Height in Dry Beans (Phaseolus vulgaris L.)	24
The Dissection of Nitrogen Response Traits Using Drone Phenotyping and Dynamic Phenotypic Analysis to Explore N Responsiveness and Associated Genetic Loci in Wheat	24
How Useful Is Image-Based Active Learning for Plant Organ Segmentation?	23
Assessing the Storage Root Development of Cassava with a New Analysis Tool	23
3dCAP-Wheat: An Open-Source Comprehensive Computational Framework Precisely Quantifies Wheat Foliar, Nonfoliar, and Canopy Photosynthesis	23
Spotibot: Rapid scoring of Botrytis lesions on rose petals using deep learning and mobile computing	23
Fruit Water Stress Index of Apple Measured by Means of Temperature-Annotated 3D Point Cloud	22

Instance Segmentation and Berry Counting of Table Grape before Thinning Based on AS-SwinT	22
TrichomeYOLO: A Neural Network for Automatic Maize Trichome Counting	22
MLG-YOLO: A Model for Real-Time Accurate Detection and Localization of Winter Jujube in Complex Structured Orchard Environments	20
PREPs: An Open-Source Software for High-Throughput Field Plant Phenotyping	20
Wearable Sensor: An Emerging Data Collection Tool for Plant Phenotyping	19
PDDD-PreTrain: A Series of Commonly Used Pre-Trained Models Support Image-Based Plant Disease Diagnosis	19
Time-Series Field Phenotyping of Soybean Growth Analysis by Combining Multimodal Deep Learning and Dynamic Modeling	19
A Multi-Target Regression Method to Predict Element Concentrations in Tomato Leaves Using Hyperspectral Imaging	17
Can Distributed Ledgers Help to Overcome the Need of Labeled Data for Agricultural Machine Learning Tasks?	17
Phenotyping of Panicle Number and Shape in Rice Breeding Materials Based on Unmanned Aerial Vehicle Imagery	17
Functional–Structural Plant Model “GreenLab”: A State-of-the-Art Review	16
Characterization and Identification of NPK Stress in Rice Using Terrestrial Hyperspectral Images	16
Multi-granularity alignment for crop diseases detection	16
GSP-AI: An AI-Powered Platform for Identifying Key Growth Stages and the Vegetative-to-Reproductive Transition in Wheat Using Trilateral Drone Imagery and Meteorological Data	15
Segmenting vegetation from UAV images via spectral reconstruction in complex field environments	15
Quantifying Contributions of Different Factors to Canopy Photosynthesis in 2 Maize Varieties: Development of a Novel 3D Canopy Modeling Pipeline	15
A Generic Model to Estimate Wheat LAI over Growing Season Regardless of the Soil-Type Background	15
From Neglecting to Including Cultivar-Specific Per Se Temperature Responses: Extending the Concept of Thermal Time in Field Crops	14
Application of Visible/Near-Infrared Spectroscopy and Hyperspectral Imaging with Machine Learning for High-Throughput Plant Heavy Metal Stress Phenotyping: A Review	14
Informed-Learning-Guided Visual Question Answering Model of Crop Disease	14
PhenoGazer: A high-throughput phenotyping system to track plant stress responses using hyperspectral reflectance, nighttime chlorophyll fluorescence and RGB imaging in controlled environments	14
High-Throughput Field Plant Phenotyping: A Self-Supervised Sequential CNN Method to Segment Overlapping Plants	14
3D U-Net Segmentation Improves Root System Reconstruction from 3D MRI Images in Automated and Manual Virtual Reality Work Flows	14
Fitting maximum crown width height of Chinese fir through ensemble learning combined with fine spatial competition	13
Noninvasive Detection of Salt Stress in Cotton Seedlings by Combining Multicolor Fluorescence–Multispectral Reflectance Imaging with EfficientNet-OB2	13
UAV-Assisted Dynamic Monitoring of Wheat Uniformity toward Yield and Biomass Estimation	13
Integrating UAV remote sensing and semi-supervised learning for early-stage maize seedling monitoring and geolocation	12
Pre-symptomatic diagnosis of rice blast and brown spot diseases using chlorophyll fluorescence imaging	12
CVRP: A rice image dataset with high-quality annotations for image segmentation and plant phenomics research	12
Quantification of the Cumulative Shading Capacity in a Maize–Soybean Intercropping System Using an Unmanned Aerial Vehicle	11
Root System Traits Contribute to Variability and Plasticity in Response to Phosphorus Fertilization in 2 Field-Grown Sorghum [Sorghum bicolor (L.) Moench] Cultivars	10
The blessing of Depth Anything: An almost unsupervised approach to crop segmentation with depth-informed pseudo labeling	10
Point Cloud Completion of Plant Leaves under Occlusion Conditions Based on Deep Learning	10
Benchmarking Self-Supervised Contrastive Learning Methods for Image-Based Plant Phenotyping	10
Efficient Noninvasive FHB Estimation using RGB Images from a Novel Multiyear, Multirater Dataset	10
AFM-YOLOv8s: An Accurate, Fast, and Highly Robust Model for Detection of Sporangia of Plasmopara viticola with Various Morphological Variants	10
Combinatorial Maps, a New Framework to Model Agroforestry Systems	9
Three-Dimensional Leaf Edge Reconstruction Combining Two- and Three-Dimensional Approaches	9
WITHDRAWN: Targeted integrating hyperspectral and metabolomic data with spectral indices and metabolite content models for efficient salt-tolerant phenotype discrimination in Medicago truncatula	9
Semi-supervised Counting of Grape Berries in the Field Based on Density Mutual Exclusion	9
CSNet: A Count-Supervised Network via Multiscale MLP-Mixer for Wheat Ear Counting	9
Bridging Time-series Image Phenotyping and Functional–Structural Plant Modeling to Predict Adventitious Root System Architecture	9
Counting Canola: Toward Generalizable Aerial Plant Detection Models	9
A Precise Image-Based Tomato Leaf Disease Detection Approach Using PLPNet	9
DomAda-FruitDet: Domain-Adaptive Anchor-Free Fruit Detection Model for Auto Labeling	9
Corrigendum to “Automatic Fruit Morphology Phenome and Genetic Analysis: An Application in the Octoploid Strawberry”	9