CRISPR Journal

Papers
(The median citation count of CRISPR Journal is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)
ArticleCitations
Adaptation by Type V-A and V-B CRISPR-Cas Systems Demonstrates Conserved Protospacer Selection Mechanisms Between Diverse CRISPR-Cas Types419
Gene Editing Corrects In Vitro a G > A GLB1 Transition from a GM1 Gangliosidosis Patient45
Increasing Genome Editing Efficiency of Cas9 Nucleases by the Simultaneous Use of Transcriptional Activators and Histone Acetyltransferase Activator45
CRISPR-Cas Gene Perturbation and Editing in Human Induced Pluripotent Stem Cells38
Hairpin Internal Nuclear Localization Signals in CRISPR-Cas9 Enhance Editing in Primary Human Lymphocytes36
Exploring the Cytoplasmic Retention of CRISPR-Cas9 in Eukaryotic Cells: The Role of Nuclear Localization Signals and Ribosomal Interactions36
CRISPR Comparison Toolkit: Rapid Identification, Visualization, and Analysis of CRISPR Array Diversity35
Inference of CRISPR Edits from Sanger Trace Data34
Editing Properties of Base Editors with SpCas9-NG in Discarded Human Tripronuclear Zygotes33
A Taxonomic and Phylogenetic Classification of Diverse Base Editors32
Curing “GFP-itis” in Bacteria with Base Editors: Development of a Genome Editing Science Program Implemented with High School Biology Students30
Acknowledgment of Reviewers 202229
Novel CRISPR-Associated Gene-Editing Systems Discovered in Metagenomic Samples Enable Efficient and Specific Genome Engineering27
Generation of a Commercial-Scale Founder Population of Porcine Reproductive and Respiratory Syndrome Virus Resistant Pigs Using CRISPR-Cas26
Advances in Cas12a-Based Amplification-Free Nucleic Acid Detection26
Gene Editing and Rett Syndrome: Does It Make the Cut?26
Early Detection of Wildlife Disease Pathogens Using CRISPR-Cas System Methods24
Increasing the Targeting Scope of CRISPR Base Editing System Beyond NGG24
CRISPR Crops and Sustainable Agriculture23
Implementing CRISPR-Cas9 Yeast Practicals into Biology Curricula23
Comprehensive Analysis of CRISPR-Cas9 Editing Outcomes in Yeast Xanthophyllomyces dendrorhous22
Generation of Human Isogenic Induced Pluripotent Stem Cell Lines with CRISPR Prime Editing21
Efficient Homology-Directed Repair with Circular Single-Stranded DNA Donors20
Specific High-Sensitivity Enzymatic Reporter UnLOCKing-Mediated Detection of Oncogenic BCR::ABL1 and EGFR Rearrangements19
CRISPR à la carte19
CRISPR Rewrites the Future of Medicine18
Widespread Impact of Natural Genetic Variations in CRISPR-Cas9 Outcomes17
A Story of Perseverance: An Interview with Matthew Porteus17
Engineering CjCas9 for Efficient Base Editing and Prime Editing16
Automated Good Manufacturing Practice-Compatible CRISPR-Cas9 Editing of Hematopoietic Stem and Progenitor Cells for Clinical Treatment of β-Hemoglobinopathies16
Combined Theoretical, Bioinformatic, and Biochemical Analyses of RNA Editing by Adenine Base Editors14
Engineered Antiviral Sensor Targets Infected Mosquitoes14
Rational Engineering of CRISPR-Cas9 Nuclease to Attenuate Position-Dependent Off-Target Effects14
Evolutionary Biology and Gene Editing of Cat Allergen, Fel d 113
Evolution of Type IV CRISPR-Cas Systems: Insights from CRISPR Loci in Integrative Conjugative Elements of Acidithiobacillia13
Gene Editing in the Chagas Disease Vector Rhodnius prolixus by Cas9-Mediated ReMOT Control13
dCas9 Tells Tales: Probing Gene Function and Transcription Regulation in Cancer13
A PCR-Induced Mutagenesis-Restriction Fragment Length Polymorphism Method for the Detection of CRISPR-Induced Indels12
CRISPR Momentum in the Clinic and the Field12
A Fluorescent Reporter Mouse for In Vivo Assessment of Genome Editing with Diverse Cas Nucleases and Prime Editors11
Fanzors: Mysterious TnpB-Like Bacterial Transposon-Related RNA-Guided DNA Nucleases of Eukaryotes11
Affordable Pricing of CRISPR Treatments is a Pressing Ethical Imperative11
Enhancements of the CRISPR-Cas System in the Silkworm Bombyx mori10
A Multiplexed Cas13-Based Assay with Point-of-Care Attributes for Simultaneous COVID-19 Diagnosis and Variant Surveillance10
CRISPR Adventures in China9
A Field Day for Gene-Edited Brassicas and Crop Improvement9
It's a Knockout for Cat Allergies?9
CRISPR-Cas9-Mediated Correction of TSC2 Pathogenic Variants in iPSCs from Patients with Tuberous Sclerosis Complex Type 29
Application of CRISPR-Cas9 Editing for Virus Engineering and the Development of Recombinant Viral Vaccines9
A Protein-Cutting CRISPR Complex Caught in Action9
Rapid and Technically Simple Detection of SARS-CoV-2 Variants Using CRISPR Cas12 and Cas139
The CRISPR Revolution in the Drug Discovery Workflow: An Industry Perspective9
Spotlight on Genetic Design in a Spotted Wing Crop Killer9
Cas12a-Capture: A Novel, Low-Cost, and Scalable Method for Targeted Sequencing9
Warrior Spirit: An Interview with Victoria Gray, Sickle Cell Pioneer9
Five Years of Progress in CRISPR Clinical Trials (2019–2024)8
CRISPR-Cas9 Gene Editing Protects from the A53T-SNCA Overexpression-Induced Pathology of Parkinson's Disease In Vivo8
Bacterial Retrons Enable Precise Gene Editing in Human Cells8
Navigating Viral Space with CRISPR Technologies8
Base Editing of Somatic Cells Using CRISPR–Cas9 in Drosophila8
Acknowledgment of Reviewers 20238
Rapid Variant Pathogenicity Analysis by CRISPR Activation of CRB1 Gene Expression in Patient-Derived Fibroblasts8
Genome Editing Therapy for the Blood: Ex Vivo Success and In Vivo Prospects8
Special Issue: Manipulating the Microbiome with CRISPR7
Trichostatin A for Efficient CRISPR-Cas9 Gene Editing of Human Pluripotent Stem Cells7
Genome Editing Headwinds: Can CRISPR Stay on Target?7
Reduction of Pre-Existing Adaptive Immune Responses Against SaCas9 in Humans Using Epitope Mapping and Identification7
Diversification of the CRISPR Toolbox: Applications of CRISPR-Cas Systems Beyond Genome Editing6
Programming Cells by Multicopy Chromosomal Integration Using CRISPR-Associated Transposases6
Bio-Orthogonal Chemistry Conjugation Strategy Facilitates Investigation of N-methyladenosine and Thiouridine Guide RNA Modifications on CRISPR Activity6
Special Issue: CRISPR Trials6
CRISPR-Cas9 Long-Read Sequencing for Mapping Transgenes in the Mouse Genome6
Clonally Selected Lines After CRISPR-Cas Editing Are Not Isogenic6
Extreme Genome Editing6
Characterization of Research Support of Genome Editing Technologies and Transition to Clinical Trials6
Diverse Class 2 CRISPR Effectors as Active Nucleases with Expanded Targeting Capabilities6
Novel off-Targeting Events Identified after Genome Wide Analysis of CRISPR-Cas Edited Pigs6
Correction to: Give Cas a Chance: An Actionable Path to a Platform for CRISPR Cures, by Fyodor D. Urnov [DOI: 10.1089/crispr.2024.0082]6
Correction to: APOBEC Reporter Systems for Evaluating diNucleotide Editing Levels by Rieffer et al. The CRISPR Journal, 2023;6(5):430–446; DOI: 10.1089/crispr.2023.00276
PASTE: The Way Forward for Large DNA Insertions6
CRISPR-Cas12a Genome Editing at the Whole-Plant Level Using Two Compatible RNA Virus Vectors5
Reprogramming of Human B Cells from Secreting IgG to IgM by Genome Editing5
APOBEC Reporter Systems for Evaluating diNucleotide Editing Levels5
Deep Sequencing Reveals the Comprehensive CRISPR-Cas9 Editing Spectrum in Bombyx mori5
Celebrating a Decade of CRISPR-Fueled Genome Editing5
An Efficient and Cost-Effective Novel Strategy for Identifying CRISPR-Cas-Mediated Mutants in Plant Offspring5
Modified Cas9-Guided Oxford Nanopore Technology Sequencing Uncovers Single and Multiple Transgene Insertion Sites in a Zebrafish Melanoma Model5
High-Throughput Imaging of CRISPR- and Recombinant Adeno-Associated Virus–Induced DNA Damage Response in Human Hematopoietic Stem and Progenitor Cells5
CRISPR-Cas9-Mediated Targeting of Multidrug Resistance Genes in Methicillin-Resistant Staphylococcus aureus5
Electroporation-Mediated Delivery of Cas9 Ribonucleoproteins Results in High Levels of Gene Editing in Primary Hepatocytes5
Viral Delivery of Compact CRISPR-Cas12f for Gene Editing Applications5
Transversion Expansion of Base Editing5
Optimization of Genomewide CRISPR Screens Using AsCas12a and Multi-Guide Arrays5
Green Fluorescent Protein Tagged Polycistronic Reporter System Reveals Functional Editing Characteristics of CRISPR-Cas4
The CRISPR Patent Landscape: Focus on Chinese Researchers4
CRISPR Hits Home in a First-in-Human Study4
Discovery and Characterization of Novel Type V Cas12f Nucleases with Diverse Protospacer Adjacent Motif Preferences4
CRISPR and Chromothripsis: Proceed with Caution4
Enhanced Myogenesis by Silencing Myostatin with Nonviral Delivery of a dCas9 Ribonucleoprotein Complex4
Genetic Manipulation of a CAST of Characters in a Microbial Community4
Correction to: Genotyping MUltiplexed-Sequencing of CRISPR-Localized Editing (GMUSCLE): An Experimental and Computational Approach for Analyzing CRISPR-Edited Cells by Zhang et al. The CRISP4
Predicting Mutations Generated by Cas9, Base Editing, and Prime Editing in Mammalian Cells4
CRISPRi-Mediated Treatment of Dominant Rhodopsin-Associated Retinitis Pigmentosa4
AI and SynBio Meet CRISPR Heralding a New Genome Editing Era4
Modulating CRISPR-Cas Genome Editing Using Guide-Complementary DNA Oligonucleotides4
Efficient and Economical Targeted Insertion in Plant Genomes via Protoplast Regeneration4
Novel and Engineered Type II CRISPR Systems from Uncultivated Microbes with Broad Genome Editing Capability4
Identification and Evolution of Cas9 tracrRNAs4
As CRISPR Technologies Ripen, What Should We Prioritize?4
Developing Bottom-Up Induced Pluripotent Stem Cell Derived Solid Tumor Models Using Precision Genome Editing Technologies4
Response to Cook et al. re: Novel Off-Targeting Events Identified After Genome Wide Analysis of CRISPR-Cas Edited Pig4
Genomic and Transcriptomic Analyses of Prime Editing Guide RNA–Independent Off-Target Effects by Prime Editors3
Correction to: Generation of a Commercial-Scale Founder Population of Porcine Reproductive and Respiratory Syndrome Virus Resistant Pigs Using CRISPR-Cas by Burger et al. The CRISPR Journal,3
Highly Efficient One-Step Tagging of Endogenous Genes in Primary Cells Using CRISPR-Cas Ribonucleoproteins3
CRISPRclassify: Repeat-Based Classification of CRISPR Loci3
Special Issue on CRISPR Diagnostics3
CRISPR-Cas9 Genome Editing Uncovers the Mode of Action of Methoprene in the Yellow Fever Mosquito, Aedes aegypti3
Periodontal Disease Pathogens, Pathogenesis, and Therapeutics: The CRISPR-Cas Effect3
Identification of a Guide RNA Targeting an Ultraconserved Element for Evaluation of Cas9 Genome Editors Across Mammalian Species3
The Promises and Pitfalls of CRISPR-Mediated Base Editing in Stem Cells3
Genome Editing in Apicomplexan Parasites: Current Status, Challenges, and Future Possibilities3
Acknowledgment of Reviewers 20213
JACKIE: Fast Enumeration of Genome-Wide Single- and Multicopy CRISPR Target Sites and Their Off-Target Numbers3
Fast and Efficient Generation of Isogenic Induced Pluripotent Stem Cell Lines Using Adenine Base Editing3
Enrichment of Allelic Editing Outcomes by Prime Editing in Induced Pluripotent Stem Cells3
CRISPR Empowers Tree Bioengineering for a Sustainable Future2
Monitoring the Land and Sea: Enhancing Efficiency Through CRISPR-Cas Driven Depletion and Enrichment of Environmental DNA2
Establishment of a CRISPR-Cas9-Mediated Genome Editing System in Flax2
Efficient Generation of SOCS2 Knock-Out Sheep by Electroporation of CRISPR-Cas9 Ribonucleoprotein Complex with Dual-sgRNAs2
Impact of KIT Editing on Coat Pigmentation and Fresh Meat Color in Yorkshire Pigs2
Clinical Milestone for CRISPR Medicines2
Functional and Phylogenetic Diversity of Cas10 Proteins2
Optimizing Genome Editing in Mollusks (Crassostrea gigas) in Vitro Validation of sgRNA and Identifying Key Factors Influencing Efficiency2
CRISPR's Path to the Clinic2
Compact Cje3Cas9 for Efficient In Vivo Genome Editing and Adenine Base Editing2
CRISPR and the Plant Pathologists' Holy Grail2
Gene-Edited Fluorescent and Mixed Cerebral Organoids2
Acknowledgment of Reviewers 20242
A Mutation-Agnostic Hematopoietic Stem Cell Gene Therapy for Metachromatic Leukodystrophy2
Model System to Analyze RNA-Mediated DNA Repair in Mammalian Cells2
Special Issue: Manipulating the Microbiome with CRISPR2
RNA Binding Proteins As Regulators of Oxidative Stress Identified by a Targeted CRISPR-Cas9 Single Guide RNA Library2
Functional Characterization of Type III-A CRISPR-Cas in a Clinical Human Methicillin-R Staphylococcus aureus Strain2
Search for Origins of Anti-CRISPR Proteins by Structure Comparison2
CLASH of the Titans: How CAR-T Cells Can Triumph Over Tumors2
Allele-Specific Inactivation of an Autosomal Dominant Epidermolysis Bullosa Simplex Mutation Using CRISPR-Cas92
Rosalind Franklin Society Proudly Announces the 2023 Award Recipient for The CRISPR Journal2
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