Molecular Omics

Article	Citations
Contents list	97
Front cover	45
Cancer evaluation in dogs using cerumen as a source for volatile biomarker prospection	44
Advancing science through data sharing: a new data policy for Molecular Omics	40
Front cover	33
Proteomic analysis reveals mechanisms underlying increased efficacy of bleomycin by photochemical internalization in bladder cancer cells	29
Comparative glycomic analysis of hawk ( Rupornis magnirostris ), caiman ( Caiman latirostris ) and sea tur	27
The relationship between bacterial outer membrane vesicles and halophilic adaptation	24
Metabolite-centric identification of antimetabolite drug targets across cancer and neurodegenerative diseases	19
Integration of focal adhesion morphogenesis and polarity by DOCK5 promotes YAP/TAZ-driven drug resistance in TNBC	17
The RNA cargo of Myxococcus outer membrane vesicles	17
Temperature- and time-dependent degradation of mouse tissue proteins: insights into RNA-binding protein stability via mass spectrometry	14
Plasma metabolomic signatures from patients following high-dose total body irradiation	14
Front cover	14
Contents list	13
Unraveling the phenotypic and metabolic responses induced by urea-encapsulated hydrogel beads on Brassica juncea (L.) Czern & Coss	13
Discovery of candidate biomarkers from plasma-derived extracellular vesicles of patients with cirrhosis and hepatocellular carcinoma: an exploratory proteomic study	13
Contents list	12
Enhanced anti-inflammatory and anti-fibrotic effects of nanoparticles loaded with a combination of Aloe vera – Moringa oleifera	11
Correction: Analysis of N -glycosylation protein of Kashin–Beck disease chondrocytes derived from induced pluripotent stem cells based on label-free stra	11
Transcriptome profiling of serum exosomes by RNA-Seq reveals lipid metabolic changes as a potential biomarker for evaluation of roxadustat treatment of chronic kidney diseases	11
Front cover	11
Platelet proteomics on less than a drop of previously frozen, non-citrate plasma	11
Revealing the dynamics of fungal disease with proteomics	10
Nucleolin perturbation alters membrane lipid homeostasis	10

Back cover	10
Systematic characterization of m6A proteomics across 12 cancer types: a multi-omics integration study	10
Integrative transcriptomics and metabolomics reveal distinct metabolic reprogramming in luminal and triple-negative breast cancer cells	10
Front cover	9
Untargeted metabolomics analysis reveals spatial metabolic heterogeneity in different intestinal segments of type 1 diabetic mice	9
Functional response of microbial communities in lab-controlled oil-contaminated marine sediment	9
Prunus mongolica oil attenuates hepatic fibrosis via a lncRNA-mediated ceRNA network targeting dual PGC-1α/PPARγ and TGF-β/Sma	9
Understanding pulmonary hypertension: the need for an integrative metabolomics and transcriptomics approach	9
Back cover	8
Complementarity of two proteomic data analysis tools in the identification of drug-metabolising enzymes and transporters in human liver	8
Back cover	8
Unraveling the role of intra-cellular metabolites in the lactic acid production by novel Bacillus amyloliquefaciens using sugarcane molasses as a substra	8
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Analysis of FAIMS for the study of affinity-purified protein complexes using the orbitrap ascend tribrid mass spectrometer	8
Antibiotic-induced gut microbiota dysbiosis altered host metabolism	8
The alteration of urinary metabolomics profiles in Kashin–Beck disease in a three consecutive year study	8
Lnc-TMEM132D-AS1 as a potential therapeutic target for acquired resistance to osimertinib in non-small-cell lung cancer	7
Systemic analysis of lipid metabolism from individuals to multi-organism systems	7
Omics approaches to better understand the molecular mechanism of necroptosis and their translational implications	7
Contents list	7
Lipid profile variability in children at different ages measured in dried blood spots	7
Single cell proteomics analysis of drug response shows its potential as a drug discovery platform	7
Identification of prognostic factors in classic Hodgkin lymphoma by integrating whole slide imaging and next generation sequencing	7
Sequencing, assembly, and genomic annotation of Leucoagaricus gongylophorus LEU18496, a dikarya mutualistic species	7
Serum metabolomics reveals the metabolic profile and potential biomarkers of ankylosing spondylitis	7
Back cover	7
Front cover	7
Activation of KLF6 by titanate nanofibers and regulatory roles of KLF6 on ATF3 in the endothelial monolayer and mouse aortas	7
Proteomics-based molecular and functional characteristic profiling of muscle tissue in Triploid crucian carp	6
Ethyl acetate extract of Caesalpinia sappan L. for the treatment of atherosclerosis in ApoE−/− mice and its mechanism	6
Contents list	6
Inside front cover	6
Back cover	6
Integrating N -glycan and CODEX imaging reveal cell-specific protein glycosylation in healthy human lung	6
Species-level identification of enterotype-specific microbial markers for colorectal cancer and adenoma	6
Proteomic changes associated with racial background and sepsis survival outcomes	6
Front cover	6
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Front cover	6
Back cover	5
Identification of putative kidney-derived proteins in plasma using nanoparticle enrichment	5
Anti-inflammatory effects of myristic acid mediated by the NF-κB pathway in lipopolysaccharide-induced BV-2 microglial cells	5
MALDI mass spectrometry imaging in plant and food lipidomics: advances, challenges, and future perspectives	5
Lipidomics in forensic science: a comprehensive review of applications in drugs, alcohol, latent fingermarks, fire debris, and seafood authentication	5
Proteomic and metabolomic dissection of the BRAF V600E mutation-induced cellular state transition in lung epithelial cells	5
Back cover	5
Human circulatory proteome interaction, oxidative stress-associated signalling and cardiovascular implications during titanium dioxide nanoparticle (TiO2-NP) exposure	5
Intact cell lipidomics using the Bruker MBT lipid Xtract assay allows the rapid detection of glycosyl-inositol-phospho-ceramides from Aspergillus fumigatus	5
Proteomic analysis reveals anticancer mechanisms of Bhallataka taila in inhibiting lung cancer progression and metastasis	5
Antimalarial mechanism of action of the natural product 9-methoxystrobilurin G	5

A comparative performance evaluation of imputation methods in spatially resolved transcriptomics data	5
Sustained hypoxia but not intermittent hypoxia induces HIF-1α transcriptional response in human aortic endothelial cells	5
Back cover	5
Hypoxia-induced alterations in lipid polyunsaturation and associated proteins drive aggressive metastasis in pancreatic cancer via the PPAR/hypoxia pathw	4
Multi-omics insights into the interplay between gut microbiota and colorectal cancer in the “microworld” age	4
Comprehensive untargeted lipidomic profiling of third generation lentiviral vectors and packaging cells	4
Mammary gland metabolism and its relevance to the fetoplacental expression of cytokine signaling in caveolin-1 null mice	4
Lipidomics reveals cell specific changes during pluripotent differentiation to neural and mesodermal lineages	4
Unmasking the lipid landscape: carbamazepine induces alterations in Leydig cell lipidome	4
Butyrate promotes C2C12 myoblast proliferation by activating ERK/MAPK pathway	4
Protein network analysis links the NSL complex to Parkinson’s disease via mitochondrial and nuclear biology	4
Mass spectrometry-based profiling of phosphoinositide: advances, challenges, and future directions	4
Elevated urea levels in human frontotemporal dementia and amyotrophic lateral sclerosis post-mortem brain tissue: evidence of a multi-dementia pathogenic	4
Chemical diversity of Brittonodoxa subpinnata , a Brazilian native species of moss	4
Front cover	4
Zooming into rearranged genome: applying pipeline of cytological, genomic, and transcriptomic methods for structural variant interpretation	4
A multi-omics machine learning classifier for outgrowth of cow's milk allergy in children	4
Front cover	4
Contents list	4
Back cover	4
Deep learning methods and applications in single-cell multimodal data integration	4
Back cover	3
Profiling protein targets of cellular toxicant exposure	3
Prostate cancer: metabolic remodelling in expressed prostatic secretions reveals cellular structural changes measured by mpMRI	3
You are what you degrade: tracking the cellular fates of the proteasomal degradome	3
Investigating the mechanism of Qifu Yin in ameliorating memory disorders through pseudo-targeted lipidomics	3
Back cover	3
Front cover	3
Biochemical and metabolic signatures are fundamental to drought adaptation in PGPR Enterobacter bugandensis WRS7	3
Placental metabolomics for assessment of pregnancy complications: a systematic review	3
An adaptable in silico ensemble model of the arachidonic acid cascade	3
Gene expression analysis of carbohydrate catabolism in Leucoagaricus gongylophorus LEU18496	3
Prediction of quality markers in Maren Runchang pill for constipation using machine learning and network pharmacology	3
Front cover	3
Distinct global metabolomic profiles of the model organism Caenorhabditis elegans during interactions with Staphylococcus aureus	3
Role of identified proteins in the proteome profiles of CDK4/6 inhibitor-resistant breast cancer cell lines	3
Generation of β-like cell subtypes from differentiated human induced pluripotent stem cells in 3D spheroids	3
Long-term physical inactivity induces significant changes in biochemical pathways related to metabolism of proteins and glycerophospholipids in mice	3
Nontargeted metabolomics reveals differences in the metabolite profiling among methicillin-resistant and methicillin-susceptible Staphylococcus aureus in	3
Contents list	3
Contents list	3
Pancreatic cancer environment: from patient-derived models to single-cell omics	3
Cytokine-induced memory-like responses in endothelial cells link chronic inflammation to vascular disease risk	3
Integrative analysis of small non-coding RNAs predicts a piRNA/miRNA-CCND1/BRAF/HRH1/ATXN3 regulatory circuit that drives oncogenesis in glioblastoma	3
Retraction: Tetracycline-controllable artificial microRNA-HOTAIR + EZH2 suppressed the progression of bladder cancer cells	3
Graphene oxide links alterations of anti-viral signaling pathways with lipid metabolism via suppressing TLR3 in vascular smooth muscle cells	3
A practical guide to experimental design and power analysis for metaproteomics studies	3
Open-tubular trap columns: towards simple and robust liquid chromatography separations for single-cell proteomics	3
Front cover	3
Exon–intron boundary detection made easy by physicochemical properties of DNA	2
An altered proteome in ovarian cancer stem-like cells: profiling of the mDivi-1 induced proteome and its clinical significance	2
LC-MS-based metabolomics reveals the in vivo effect of Shegan Mahuang Decoction in an OVA-induced rat model of airway hyperresponsiveness	2
Pre-analytical aspects in metabolomics of human biofluids – sample collection, handling, transport, and storage	2
Lamiophlomis rotata attenuates rheumatoid arthritis by regulating sphingolipid and steroid hormone metabolism	2
Front cover	2
A bright future for proteomics of health and disease. Introduction to the US HUPO 2021 themed issue – proteomics from single cell to systems biology in health and disease	2
Contents list	2
Biomarkers of heart failure: advances in omics studies	2
Front cover	2
Contents list	2
Contents list	2
Mapping the Helichrysum metabolome: uncovering species-specific chemistry through an AI-guided LC-MS/MS workflow	2
Back cover	2
Cronobacter sakazakii infection implicates multifaceted neuro-immune regulatory pathways of Caenorhabditis elegans	2
Competing technologies: determining the geographical origin of strawberries ( Fragaria × ananassa ) using	2
Urinary metabolomics identifies lactate as a biomarker for bladder cancer detection and progression	2
Back cover	2
Integrating host and microbiome biology using holo-omics	2
Proteome- and metabolome-level changes during early stages of clubroot infection in Brassica napus canola	2
Differentially regulated saliva proteome and metabolome: a way forward for risk-assessment of oral cancer among tobacco abusers	2
Urine metabolomics for seronegative rheumatoid arthritis: an exploratory dual-platform analysis	2
Size exclusion chromatography based proteomic and degradomic profiling of inflammasome-activated, murine bone marrow-derived dendritic cells highlights complex retention and release of cleavage produc	2
Focus on the molecular mechanisms of cisplatin resistance based on multi-omics approaches	1
Metabolomics approach to understand molecular mechanisms involved in fungal pathogen–citrus pathosystems	1
Correction: Metabolomics study reveals the alteration of fatty acid oxidation in the hearts of diabetic mice by empagliflozin	1
Advancements in automation for plasma proteomics sample preparation	1
A Q-marker screening strategy based on ADME studies and systems biology for Chinese herbal medicine, taking Qianghuo Shengshi decoction in treating rheumatoid arthritis as an example	1
Front cover	1
Inside front cover	1
Advancing colorectal cancer research through lipidomics	1

Correction: Generation of β-like cell subtypes from differentiated human induced pluripotent stem cells in 3D spheroids	1
Influence of sex, age, ethnicity/race, and body mass index on the cerumen volatilome using two data analysis approaches: binary and semiquantitative	1
Back cover	1
Network modeling suggests HIV infection phenocopies PI3K-AKT pathway mutations to enhance HPV-associated cervical cancer	1
Investigation of the motif activity of transcription regulators in pancreatic β-like cell subpopulations differentiated from human induced pluripotent stem cells	1
GRL–PUL: predicting microbe–drug association based on graph representation learning and positive unlabeled learning	1
A 9-gene biomarker panel identifies bacterial coinfections in culture-negative COVID-19 cases	1
Outstanding Reviewers for Molecular Omics in 2023	1
Front cover	1
TarpiD, a database of putative and validated targets of piRNAs	1
TALKIEN: crossTALK IntEraction Network. A web-based tool for deciphering molecular communication through ligand–receptor interactions	1