Plant Direct

Papers
(The median citation count of Plant Direct is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-06-01 to 2026-06-01.)
ArticleCitations
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Automated imaging of duckweed growth and development40
NAC domain transcription factors VNI2 and ATAF2 form protein complexes and regulate leaf senescence39
FIMBRIN2 Regulates ABA‐Induced Stomatal Closure by Promoting Microfilament Bundling and Turnover in Arabidopsis Guard Cells36
Identification of Gene Targets for the Sprouting Inhibitor CIPC35
Photosynthetically active radiation is required for seedling growth promotion by volcanic dacitic tuff breccia (Azomite)33
Low‐Cost Custom‐Built Flow Meters for Plant Hydraulic Conductance: Validation of Accuracy, Precision, and Reproducibility31
A K homology (KH) domain protein identified by a forward genetic screen affects bundle sheath anatomy in Arabidopsis thaliana29
Stage‐Specific RNA Turnover Drives Small RNA Dynamics in ArabidopsisColletotrichum Interactions22
Comparative Three‐Barcode Phylogenetics and Soil Microbiomes of Planted and Wild Arbutus Strawberry Trees22
Cold‐inducible promoter‐driven knockdown of Brachypodium antifreeze proteins confers freezing and phytopathogen susceptibility22
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Regulatory Coordination of Photophysical, Photochemical, and Biochemical Reactions in the Photosynthesis of Land Plants20
Reference nodule transcriptomes for Melilotus officinalis and 20
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Dissecting genomic regions and underlying sheath blight resistance traits in rice (Oryza sativaL.) using a genome‐wide association study19
The BnaBPs gene regulates flowering time and leaf angle in Brassica napus18
Identification of new potential downstream transcriptional targets of the strigolactone pathway including glucosinolate biosynthesis17
A strategy for identification and characterization of genic mutations using a temperature‐sensitive chlorotic soybean mutant as an example16
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Dissecting the genetic architecture of sunflower disc diameter using genome‐wide association study16
Systematic expression analysis of cysteine‐rich secretory proteins, antigen 5, and pathogenesis‐related 1 protein (CAP) superfamily in Arabidopsis16
Transformation and regeneration of DNA polymerase Θ mutant rice plants16
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Conserved and variable heat stress responses of the Heat Shock Factor transcription factor family in maize and Setaria viridis15
Solution Structure and NMR Chemical Shift Perturbations of the Arabidopsis BCCP1 Identify Intersubunit Interactions Potentially Involved in the Assembly of the Heteromeric Acetyl‐CoA Carboxylase14
Phytochrome E Plays a Role in the Suppression of Germination in Far‐Red Light in Tomato14
CUT&Tag for High‐Resolution Epigenomic Profiling From a Low Amount of Arabidopsis Tissue14
A Fluorescence‐Based Transient Expression Assay for the Analysis of Upstream Open Reading Frames in Plants14
GABA promotes peroxisome proliferation in Triticum monococcum leaves14
MDF Regulates a Network of Auxin‐Dependent and Auxin‐Independent Pathways of Adventitious Root Regeneration in Arabidopsis14
Between Two Extremes: Tripsacum dactyloides Root Anatomical Responses to Drought and Waterlogging13
Root and Leaf Traits for Dehydration Avoidance and Enhanced Grain Yield in Cowpea ( Vigna unguiculata 13
CRISPR/Cas9‐mediated saturated mutagenesis of the cotton MIR482 family for dissecting the functionality of individual members in disease response13
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Establishing an Immune System Conferring DNA and RNA Virus Resistance in Plants Using CRISPR/Cas12a Multiplex Gene Editing13
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Toward an Automated System for Nondestructive Estimation of Plant Biomass13
NDH‐1L with a truncated NdhM subunit is unstable under stress conditions in cyanobacteria12
Transcriptomic and Metabolic Insight Into Flavonoid Biosynthesis Underlying Black and Yellow Seed Coat Color Variation in Soybean ( Glycine max 12
Identification and Evolution of Salt‐Tolerant Genes in Weedy Rice Through High‐Throughput Resequencing12
Specificity and Selectivity of Raman Spectroscopy for the Detection of Dose‐Dependent Heavy Metal Toxicities12
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The rice annexin gene OsAnn5 is involved in cold stress tolerance at the seedling stage11
Thepho1;2a′‐m1.1allele ofPhosphate1conditions misregulation of the phosphorus starvation response in maize (Zea maysssp.maysL.)11
Combined Physiological and Transcriptomic Analysis Reveals Key Regulatory Networks and Potential Hub Genes Controlling Chilling Tolerance During Soybean Germination11
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Enhanced Pepper Resistance to Sclerotium rolfsii Through Root Development and Enzyme Modulation by11
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Identification of a xyloglucan beta‐xylopyranosyltransferase from Vaccinium corymbosum11
COP1 mutation causes low leaf temperature under various abiotic stresses in Arabidopsis thaliana11
Suppression of Chorismate Mutase 1 in Hybrid Poplar to Investigate Potential Redundancy in the Supply of Lignin Precursors11
Albino lethal 13, a chloroplast‐imported protein required for chloroplast development in rice10
Cm SGT1 , Transcriptionally Regulated by CmWRKY21 and CmWRKY31, Improves Powdery Mildew Resistance in 10
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Simultaneous CAS9 editing of cpSRP43, LHCA6, and LHCA7 in Picochlorum celeri lowers chlorophyll levels and improves biomass productivity10
Leaf Anatomy, Volatile Metabolite Profile, and Cytotoxic Activity of the Endemic Seseli tomentosum 10
A novel CLAVATA1 mutation causes multilocularity in Brassica rapa 10
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LeafDNet: Transforming Leaf Disease Diagnosis Through Deep Transfer Learning10
Genome wide association studies on seven yield‐related traits of 183 rice varieties in Bangladesh10
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Shedding light on AT1G29480 of Arabidopsis thaliana—An enigmatic locus restricted to Brassicacean genomes10
Untargeted Metabolomics Reveals Organ‐Specific and Extraction‐Dependent Metabolite Profiles in Endemic Tajik Species Ferula violacea Korovin10
ZmRop1 participates in maize defense response to the damage of Spodoptera frugiperda larvae through mediating ROS and soluble phenol production9
Phenotypic and transcriptomic analysis reveals early stress responses in transgenic rice expressing Arabidopsis DREB1a9
Effect of Low Red‐to‐Far‐Red Light on Stem Elongation and Pith Cell Development in Dicots9
A Study on the Response Mechanism of Davidia involucrata Baill. to Drought Stress Based on Transcriptomic Analysis9
Multi‐Experiment and Multi‐Locus Genome‐Wide Association Mapping for Grain Arsenic in Rice Population9
The rolB‐transgenic Nicotiana tabacum plants exhibit upregulated ARF7 and ARF19 gene expression9
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Assessment of Seed Priming With Melatonin to Improve Morpho‐Physiological and Biochemical Aspects of Common Bean (Phaseolus vulgaris L.) Under Magnesium Deficiency9
Delineating genetic regulation of cannabinoid biosynthesis during female flower development in Cannabis sativa 9
Parasitic‐Plant Parasite Rewires Flowering Pathways to Induce Stem‐Derived Galls9
Drought specifically downregulates mineral nutrition: Plant ionomic content and associated gene expression9
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The plant endoplasmic reticulum UPRome: A repository and pathway browser for genes involved in signaling networks linked to the endoplasmic reticulum8
An open source plant kinase chemogenomics set8
Keeping time in the dark: Potato diel and circadian rhythmic gene expression reveals tissue‐specific circadian clocks8
Targeted mutagenesis of StISAC stabilizes the production of anthocyanins in potato cell culture8
δ13C as a tool for iron and phosphorus deficiency prediction in crops8
Plant responses to limited aeration: Advances and future challenges8
Blue‐green fluorescence during hypersensitive cell death arises from phenylpropanoid deydrodimers8
Determination of the Mechanisms of MCPA Resistance in Amaranthus powellii 8
Combined Analysis of Transcriptome and Metabolome Explains the Differences in Pulp Color in Jackfruit8
Antagonistic functions of CTL1 and SUH1 mediate cell wall assembly in Arabidopsis7
Effects of light regimes on circadian gene co‐expression networks in Arabidopsis thaliana7
The male germ unit association is independently regulated of GUM in Arabidopsis thaliana7
Effect of graphene on soybean root colonization by Bradyrhizobium strains7
Effects of Trichoderma harzianum biofertilizer on growth, yield, and quality of Bupleurum chinense7
Reevaluation of ethylene role in Arabidopsis cauline leaf abscission induced by water stress and rewatering7
Molecular Characterization of Cytokinin Response Regulator ARR21 in Arabidopsis Seed Development7
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Differences in Phenylpropanoid and Reactive Oxygen Species Genes Drive Plastic and Adaptive Responses to Drought Stress Between Douglas‐Fir Varieties and Hybrids7
The Shock of Shatter: Understanding Silique and Silicle Dehiscence for Improving Oilseed Crops in Brassicaceae7
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Light and jasmonic acid coordinately regulate the phosphate responses under shade and phosphate starvation conditions in Arabidopsis6
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Exome‐based new allele‐specific PCR markers and transferability for sodicity tolerance in bread wheat (Triticum aestivum L.)6
The halotolerant rizhobacterium Glutamicibacter sp. alleviates salt impact on Phragmites australis by producing exopolysaccharides and limiting plant sodium uptake6
Genome‐Wide Analysis of the lncRNAs and miRNAs Involved in Flower Development in Radish6
Screening, Diversity, and Characterization of Fungal Endophytes Isolated From the Halophyte Limonium axillare and the Potential of Biocontrol Antagonists Against Fusarium oxysporum6
Heritable induced resistance in Arabidopsis thaliana: Tips and tools to improve effect size and reproducibility6
A chemical genetic screen with the EXO70 inhibitor Endosidin2 uncovers potential modulators of exocytosis in Arabidopsis6
PINOID‐centered genetic interactions mediate auxin action in cotyledon formation6
Integrative physiological and transcriptome analysis unravels the mechanism of low nitrogen use efficiency in burley tobacco6
Interactions with microbial consortia have variable effects in organic carbon and production of exometabolites among genotypes of Populus trichocarpa6
Plasticity of Arabidopsis rosette transcriptomes and photosynthetic responses in dynamic light conditions6
PhosBoost: Improved phosphorylation prediction recall using gradient boosting and protein language models6
Localization of proteins involved in the biogenesis and repair of the photosynthetic apparatus to thylakoid subdomains in Arabidopsis6
Temporal and environmental factors interact with rootstock genotype to shape leaf elemental composition in grafted grapevines6
The melon Fom‐1–Prv resistance gene pair: Correlated spatial expression and interaction with a viral protein6
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Soybean Cyst Nematode‐Resistant Protein AATRhg1 Affects Amino Acid Homeostasis and Betalain Accumulation6
Correction to “Identification of Novel Candidate Genes Associated With the Symbiotic Compatibility of Soybean With Rhizobia Under Natural Conditions”6
The Influence of the Conditions of Cultivation of Lactic Acid Bacteria on Their Antagonistic Activity Against Some Plant Pathogenic Bacteria6
Root hydraulic properties: An exploration of their variability across scales5
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Genome‐wide association analysis of hyperspectral reflectance data to dissect the genetic architecture of growth‐related traits in maize under plant growth‐promoting bacteria inoculation5
Biomass formation and sugar release efficiency of Populus modified by altered expression of a NAC transcription factor5
Target‐site mutations Ile1781Leu and Ile2041Asn in the ACCase2 gene confer resistance to fluazifop‐p‐butyl and pinoxaden herbicides in a johnsongrass accession from Arkansas, USA5
Tuning of meristem maturation rate increases yield in multiple Triticum aestivum cultivars5
Correction to “NDH‐1L with a truncated NdhM subunit is unstable under stress conditions in cyanobacteria”5
Gene Expression Patterns Regulating Peanut Reproductive Phenology5
Myb‐like transcription factors have epistatic effects on circadian clock function but additive effects on plant growth5
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Unraveling Plant Recombination Patterns: Insights From Genome k‐mers5
Expression of a mammalian RNA demethylase increases flower number and floral stem branching in Arabidopsis thaliana 5
Conserved cellular patterning in the mesophyll of rice leaves5
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In vivo localization of iron starvation induced proteins under variable iron supplementation regimes in Phaeodactylum tricornutum5
Exogenous Hormone Treatments Reveal Species‐Specific Regulation of Individual Components of Root Architecture and Salt Ion Accumulation in Cultivated and Wild Tomatoes5
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Genetic variation in hydrogen cyanide potential of perennial sorghum evaluated by colorimetry5
Glutamate Methylation, a Novel Histone Mark in Diatoms: Mass Spectrometry Identification and Structural Characterization5
Leaf pigmentation in Cannabis sativa: Characterization of anthocyanin biosynthesis in colorful Cannabis varieties5
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An Arabidopsis Cell Culture With Weak Circadian Rhythms Under Constant Light Compared With Constant Dark Can Be Rescued by ELF35
Overexpression of CsBRC, an F‐box gene from Camellia sinensis, increased the plant branching in tobacco and rice5
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Genome and Tissue‐Specific Transcriptome of the Tropical Milkweed ( Asclepias curassavica )4
The gs3 allele from a large‐grain rice cultivar, Akita 63, increases yield and improves nitrogen‐use efficiency4
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α‐Tomatine gradient across artificial roots recreates the recruitment of tomato root‐associated Sphingobium4
A survey of the Sli gene in wild and cultivated potato4
BdNRT2A and BdNRT3.2 Are the Major Components of the High‐Affinity Nitrate Transport System in Brachypodium distachyon4
Differences in mucilage properties and stomatal sensitivity of locally adapted Zea mays in relation with precipitation seasonality and vapour pressure deficit regime of their native 4
Flow similarity model predicts the allometry and allometric covariation of petiole dimensions4
Metabolomics of related C3 and C4 Flaveria species indicate differences in the operation of photorespiration under fluctuating light4
The isothiocyanate sulforaphane induces respiratory burst oxidase homologue D‐dependent reactive oxygen species production and regulates expression of stress response genes4
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Whole‐genome DNA methylation patterns of Oryza sativa (L.) and Oryza glumaepatula (Steud) genotypes associated with aluminum response4
Genomic Markers Associated With Soybean Resistance to the Stem Borer, Dectes texanus (Coleoptera: Cerambycidae)4
Identification and preliminary characterization of conserved uncharacterized proteins from Chlamydomonas reinhardtii, Arabidopsis thaliana, and Setaria viri4
Transcriptional analysis in multiple barley varieties identifies signatures of waterlogging response4
An atlas of small RNAs from potato4
Modification of Gene Expression Involved in Alkaloid Production in Opium Poppy by VIGS Combined With Pretreatment of Macerozyme Enzyme4
Transcriptomic analysis of the defense response in “Cabernet Sauvignon” grape leaf induced by Apolygus lucorum feeding4
Correction to “Phytochrome E Plays a Role in the Suppression of Germination in Far‐Red Light in Tomato”4
Critical parameters for robust Agrobacterium‐mediated transient transformation and quantitative promoter assays in Catharanthus roseus seedlings4
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Detection and Quantification of Dysprosium in Plant Tissues3
A bHLH Transcription Factor Confers Salinity Stress Tolerance in Betula platyphylla3
Development and Evaluation of an Early Heading Rice Line From the Indica High‐Yielding Variety NSIC Rc 1603
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Investigating a role for PUB17 and PUB16 in the self‐incompatibility signaling pathway in transgenic Arabidopsis thaliana3
Cultivated sunflower (Helianthus annuus L.) has lower tolerance of moderate drought stress than its con‐specific wild relative, but the underlying traits remain elusive3
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A Potential Role for MYB93 Regulating Sulfur Responses in Arabidopsis and Tomato3
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Combining extracellular matrix proteome and phosphoproteome of chickpea and meta‐analysis reveal novel proteoforms and evolutionary significance of clade‐specific wall‐associated events in plant3
PLDC‐Net: A Domain‐Specific Base Model for Plant Leaf Disease Classification Domain Adaptation Tasks3
Genome‐Wide Analysis of the APETALA2/Ethylene‐Responsive Factor Gene Family in Carthamus tinctorius L.3
Nature's Shield: Exploring Nonglandular Trichomes (NGT) as Key Players in Plant Defense Mechanisms3
Genome‐wide association studies identify putative pleiotropic locus mediating drought tolerance in sorghum3
Sensitivity to Photoperiod Is a Complex Trait in Camelina sativa3
Cycling DOF factor mediated seasonal regulation of sexual reproduction and cold response is not conserved in Physcomitrium patens3
Integrated Metabolomics, Transcriptomics, and Ultrastructural Assessment of the Myco‐Heterotrophic Plant, Monotropa uniflora 3
Analysis of temperature effects on the protein accumulation of the FT–FD module using newly generated Arabidopsis transgenic plants3
Topping and grafting affect the alkaloid content and gene expression patterns of tobacco (Nicotiana tabacumL.)3
Project ChemicalBlooms: Collaborating with citizen scientists to survey the chemical diversity and phylogenetic distribution of plant epicuticular wax blooms3
Identification of BAHD acyltransferases associated with acylinositol biosynthesis in Solanum quitoense 3
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The brassinosteroid‐responsive protein OCTOPUS is a novel regulator of Arabidopsis thaliana immune signaling3
Intraspecific differences in the photosynthetic responses to chloroplast CO2 and photon flux density at different leaf temperatures of four grapevine cultivars grown in common outdoor condi3
Genome‐Wide Identification of MYB Genes and Analysis of Their Expression Under Cold Stress Conditions in Artocarpus heterophyllus 3
Metabolic network changes during skotomorphogenesis in Arabidopsis thaliana mutant (atdfb‐3)3
Can omic tools help generate alternative newer sources of edible seed oil?3
Rating pome fruit quality traits using deep learning and image processing3
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Differential expansion and retention patterns of LRR‐RLK genes across plant evolution2
Plant height shapes hydraulic architecture but does not predict metaxylem area under drought in Sorghum bicolor2
Genome‐wide identification and expression analysis of Na+/H+antiporter (NHX) genes in tomato under salt stress2
Removing systemic barriers to equity, diversity, and inclusion: Report of the 2019 Plant Science Research Network workshop “Inclusivity in the Plant Sciences”2
The Arabidopsis Mutant of the Small Intrinsically Disordered Protein DSS1(V) Exhibits Increased Sensitivity to Drought Stress2
PELOTA and HBS1 suppress co‐translational messenger RNA decay in Arabidopsis2
Comparative Proteomic Analysis of Self‐Compatible Turnera Mutants Suggests Glutathione S‐Transferase 8 Is 2
Mutations in Components of the TREX‐2 Complex Result in Misexpression of the Kelch‐Domain F‐Box Protein KFB39 Promoter in Arabidopsis thaliana 2
Exploring the diversity of galls on Artemisia indica induced by Rhopalomyia species through morphological and transcriptome analyses2
Crystal structure of Arabidopsis DWARF14‐LIKE2 (DLK2) reveals a distinct substrate binding pocket architecture2
Prolonged phloem feeding by the spotted lanternfly, an invasive planthopper, alters resource allocation and inhibits gas exchange in grapevines2
A Periodic 4‐h Extension of the Dark Period Did Not Cause Long‐Term Changes in the Circadian Regulation of Photosynthesis and Sugar Levels in Lettuces2
Arabidopsis‐expressing lysine‐null SUMO1 reveals a non‐essential role for secondary SUMO modifications in plants2
SNRK3.15 Is a Crucial Component of the Sulfur Deprivation Response in Arabidopsis thaliana 2
RNA‐Binding Proteome‐Wide Analysis Reveals Rice RNA‐Binding Proteins Enriched After Sobemovirus Rice Yellow Mottle Virus Infection2
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DNA barcoding of terrestrial invasive plant species in Southwest Michigan2
Exploring the role of grafting in abiotic stress management: Contemporary insights and automation trends2
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A Reference‐Free Algorithm Discovers Regulation in the Plant Transcriptome2
ALPHA: A High Throughput System for Quantifying Growth in Aquatic Plants2
Analysis of the Genetic Diversity of Houttuynia cordata Thunb Germplasm and Associated Variations in Lead Content2
The Q‐Warg Pipeline: A Robust and Versatile Workflow for Quantitative Analysis of Protoplast Culture Conditions2
Side‐chain modifications of phyllobilins may not be essential for chlorophyll degradation in Arabidopsis2
Wheat NAC transcription factor NAC5‐1 is a positive regulator of senescence2
The long road of functional recruitment—The evolution of a gene duplicate to pyrrolizidine alkaloid biosynthesis in the morning glories (Convolvulaceae)2
Characterization of promoter elements of isoprene‐responsive genes and the ability of isoprene to bind START domain transcription factors2
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Targeting dCas9‐SunTag to a Susceptibility Gene Promoter Is Sufficient for CRISPR Interference2
Chromosome‐scale genome assembly of Poa trivialis and population genomics reveal widespread gene flow in a cool‐season grass seed production system2
Creating saponin‐free yellow pea seeds by CRISPR/Cas9‐enabled mutagenesis on β‐amyrin synthase2
Maize resistance to insect herbivory is enhanced by silencing expression of genes for jasmonate‐isoleucine degradation using sugarcane mosaic virus2
Quantifying Growth and Lodging in Tef ( Eragrostis tef ) With Uncrewed Aerial Systems (UAS)2
The activation of Chlamydomonas reinhardtii alpha amylase 2 by glutamine requires its N‐terminal aspartate kinase–chorismate mutase–tyrA (ACT) domain2
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Proanthocyanidin biosynthesis in the developing wheat seed coat investigated by chemical and RNA‐Seq analysis2
Membranous Interacting Partners of Phage‐Type Plastid RNA Polymerase Have Limited Impact on Plastid Gene Expression During Chloroplast Development2
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