Phytobiomes Journal

Papers
(The median citation count of Phytobiomes Journal is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-04-01 to 2025-04-01.)
ArticleCitations
Acknowledgment of Reviewers, 202329
Hereditary Leaf Symbiosis in Tropical Plants: Evolution and Function of Vertically-Transmitted Bacterial Symbionts20
Apple Genotypes and Soil Properties Shape the Soil Microbiome and Influence the Plant Response to Replant Disease-Affected Soil20
Disentangling Shifts in the Soil Microbiome of Potatoes Infected with Rhizoctonia solani Anastomosis Group 3-PT in Search of Potential Biocontrol Agents19
A Plant Health View on Endohyphal Bacteria and Their Fungal Hosts18
Full Issue PDF16
Canker Disease Intensifies Cross-Kingdom Microbial Interactions in the Endophytic Microbiota of Citrus Phyllosphere13
Establishment of Biocontrol Agents and Their Impact on Rhizosphere Microbiome and Induced Grapevine Defenses Are Highly Soil-Dependent13
Predictive Ecology and Management of Phyllosphere Microbial Communities Through Cross-Scale Synthesis12
Foliar Fungicide Application Alters the Culturable Foliar Fungal Endophyte Community in Corn12
Fungal Metabarcoding Data for Two Grapevine Varieties (Regent and Vitis vinifera ‘Cabernet-Sauvignon’) Inoculated with Powdery Mildew (Erysiphe necator) Under Drought Conditions11
Composition of the Microbiomes from Spinach Seeds Infested or Noninfested with Peronospora effusa or Verticillium dahliae10
Synthetic Communities Increase Microbial Diversity and Productivity of Agave tequilana Plants in the Field10
Phosphate Availability Modulates Root Exudate Composition and Rhizosphere Microbial Community in a Teosinte and a Modern Maize Cultivar10
Deep-Rooted Plant Species Recruit Distinct Bacterial Communities in the Subsoil10
Changes in Bacterial Communities and Functions Associated with Litter Degradation During Forest Succession Caused by Forest Disease10
Viruses of Nitrogen-Fixing Mesorhizobium Bacteria in Globally Distributed Chickpea Root Nodules10
Host Genetic Traits Underlying the Composition and Assembly of the Citrus Microbiome10
Changes in Fungal and Oomycete Community Composition Following Irrigation Reductions Aimed at Increasing Water Use Efficiency in a Containerized Nursery Crop9
Vertical Stratification of Microbial Communities in Woody Plants9
Linnemannia elongata: A Key Species in Chitin-Based Plant Growth Promotion9
Drought Tolerance Traits in Neotropical Trees Correlate with the Composition of Phyllosphere Fungal Communities9
Nursery origin and propagation stage influence the endophytic fungal communities inhabiting grapevine planting stocks8
Biocontrol Impacts on Wheat Physiology and Fusarium Head Blight Outcomes Are Bacterial Endophyte Strain and Cultivar Specific8
Cotton Plants Presenting Symptoms Associated with Cotton Leafroll Dwarf Virus Revealed a Novel Caulimovirid, Cotton Virus A, with Endogenous Caulimovirids in Its Hosts7
Sympatric Populations of Crop and Wild Carrots (Daucus carota subsp.) Have Distinct Viromes, with Shared Core Species More Prevalent in Farm-Grown Populations7
Diversity of Bacillaceae on Rice Grown in Acid Sulfate Soils in Vietnam: Taxonomy, Specialized Metabolites, and Inhibitory Effects on Fungal Pathogens7
Exploring the Hemp Virome and Assessing Hemp Germplasm for Resistance to an Emerging Pathogen7
Wood Microbiome Variation and Interactions with Fungal Symbionts of Invasive Ambrosia Beetles7
The Phytovirome6
The microbiome of continuous wheat rotations: minor shifts in bacterial and archaeal communities but a source for functionally active plant-beneficial bacteria6
The Genetic Architecture of Arabidopsis thaliana in Response to Native Non-Pathogenic Bacterial Species Revealed by Genome-Wide Association Mapping in Field Conditions5
Predators of Soil Bacteria in Plant and Human Health5
Determinants of the Vertical Distribution of the Phyllosphere Differ Between Microbial Groups and the Epi- and Endosphere in a Tropical Forest5
Arbuscular Mycorrhizal Fungi Modify Temporal Virus Accumulation and Distribution in Different Grapevine Tissues5
Phyllospheric bacterial communities in spinach are influenced by soil nitrogen availability5
Full Issue PDF5
Evaluation of Different Phyllosphere Sample Types for Parallel Metabarcoding of Fungi and Oomycetes in Vitis vinifera5
From Roots to Leaves: The Capacity of Micromonospora to Colonize Different Legume Tissues5
Legacy Effects of Cropping System and Precipitation Influence the Core Camelina sativa Microbiome5
Chronic Drought Differentially Alters the Belowground Microbiome of Drought-Tolerant and Drought-Susceptible Genotypes of Populus trichocarpa4
Winter Rye Cover Cropping Changes Squash (Cucurbita pepo) Phyllosphere Microbiota and Reduces Pseudomonas syringae Symptoms4
NemaTaxa: A New Taxonomic Database for Analysis of Nematode Community Data4
Disease-Induced Assemblage of the Rhizosphere Fungal Community in Successive Plantings of Wheat4
The Age of Absorptive Roots Impacts Root-Adjacent Microbial Composition in Grapevines4
Amplicon Sequencing ofFusariumTranslation Elongation Factor 1α Reveals that Soil Communities ofFusariumSpecies Are Resilient to Disturbances Caused by Crop and Tillage Practices4
Microbiome Network Connectivity and Composition Linked to Disease Resistance in Strawberry Plants3
Bacterial Composition of Meloidogyne exigua Egg Masses from Symptomatic and Asymptomatic Coffee Plants3
N-Cycling Microbiome Recruitment Differences Between Modern and Wild Zea mays3
Maize Kernel-Associated Metagenomes Reveal Potential Microbe–Microbe Interactions that Underlie Fusarium Ear Rot Disease3
Passaging Phyllosphere Microbial Communities Develop Suppression Towards Bacterial Speck Disease in Tomato3
Geographic Location, Management Strategy, and Huanglongbing Disease Affect Arbuscular Mycorrhizal Fungal Communities Across U.S. Citrus Orchards3
Effects of Plant Health-Protecting Product Applications on the Root-Associated Microbiota of Apple Saplings and Strawberries3
Dominance of Ciliophora and Chlorophyta Among Phyllosphere Protists of Solanaceous Plants3
Exploring the Virome of Blackberry and Wild Rubus spp. in South Carolina3
A Metabarcoding Approach to Investigate Fungal and Oomycete Communities Associated with Kiwifruit Vine Decline Syndrome in Italy2
Old Foe, New Host: Epidemiology, Genetic Diversity, and Pathogenic Characterization of Maize Streak Virus in Rice Fields from Burkina Faso2
RNA-Sequencing-Based Virome Discovery in Florida Citrus Pests2
Rapid Restructuring of Rhizosphere and Endospheric Fungal Communities with Drought in Multiple Lines of Domesticated Sunflower2
Grove-Level Analysis of the Titer and Prevalence of ‘Candidatus Liberibacter asiaticus’ and Wolbachia in Diaphorina citri, Vector of Citrus Huanglongbing2
Seasonal Variation in Grapevine Red Blotch Virus Titer in Relation to Disease Symptom Expression in Vineyards2
Full Issue PDF2
The Bacterial and Viral Communities Associated with Onion Bacterial Bulb Rot2
Host- and Fusarium-Adapted Bacterial Consortia Alter Microbial Community Structures in Arabidopsis Roots and Suppress Fusarium oxysporum2
Searching the Pinus taeda Foliar Mycobiome for Emerging Pathogens Among Brown-Spot Needle Blight and Needlecast Outbreaks in the Southeast United States2
Analyses of Fungal Communities from Culture-Dependent and -Independent Studies Reveal Novel Mycobiomes Associated with Globodera and Heterodera Species2
Full Issue PDF2
Contrasting Nitrogen Fertilization andBrassica napus(Canola) Variety Development Impact Recruitment of the Root-Associated Microbiome2
Full Issue PDF2
Fungal Microbiome Indicators Are Associated with Genotypic Variation in Pea Root Rot Susceptibility when Intercropped with Barley2
Exploring the Effects of Trichoderma virens Biofungicide on Carrot Cavity Spot and Soil Fungal Community Dynamics2
Comparative Analysis of Two Neighboring Conducive and Suppressive Soils Toward Plant Parasitism Caused by Phelipanche ramosa on Brassica napus2
Microbial Community Analysis Offers Insight into the Complex Origins of Plant Disease in a Smallholder Farm Context1
The Root Endophytic Microbiome Shifts Under Drought in High-Performing Sorghum1
Biotic and Abiotic Stress Factors Induce Microbiome Shifts and Enrichment of Distinct Beneficial Bacteria in Tomato Roots1
Impact of Growing Conditions and Potato Cultivars on the Diversity of Endophytic Microbial Communities1
Deciphering the Key Players of the Bacterial Microbiota Associated with Aerial Crown Gall Tumors on Rhododendron: Insights into the Gallobiome1
Establishment and Effect of a Protist Consortium on the Maize Rhizosphere1
Rethinking the Roles of Pathogens and Mutualists: Exploring the Continuum of Symbiosis in the Context of Microbial Ecology and Evolution1
Metagenomic Next-Generation Sequencing (mNGS) Data Reveal the Phyllosphere Microbiome of Wheat Plants Infected by the Fungal PathogenZymoseptoria tritici1
Neonicotinoid Seed Treatments Influence Soil Nematode Taxonomic Composition and the Soil Microbial Cooccurrence Networks1
Non-Native Plant Viruses Prevalent in Remnant Natural Plant Communities Harm Native Perennial Hosts1
Characterization of Fungal Communities Associated with the Lenticel-Like Damage of ‘Hass’ Avocados in Two Geographical Locations in Colombia1
Phyllosphere, Front and Center: Focus on a Formerly ‘Ecologically Neglected’ Microbial Milieu1
Transmission Mode and Assembly of Seed Fungal Endophyte Communities in Wheat and Wheat Wild Relatives1
Endophyte-Mediated Populus trichocarpa Water Use Efficiency Is Dependent on Time of Day and Plant Water Status1
Frontiers and Opportunities in Bioenergy Crop Microbiome Research Networks1
Plant-Guided Microbiome Selection Produces Transient Effects on Insect Performance and Rhizosphere Community Assembly1
Impact of Inoculation Practices on Microbiota Assembly and Community Stability in a Fabricated Ecosystem1
Host Identity Determines the Bacterial and Fungal Community and Network Structures in the Phyllosphere of Plant Species in a Temperate Steppe1
Identification of Bacterial Populations and Functional Mechanisms Potentially Involved in Biochar-Facilitated Antagonism of the Soilborne PathogenFusarium oxysporum1
Phyllosphere Exudates Select for Distinct Microbiome Members in Sorghum Epicuticular Wax and Aerial Root Mucilage1
Unravelling the Bacterial Community Composition of Valerianella locusta, A Cold-Tolerant Plant1
Impacts of Host Genotype and Grafting on Root, Rhizosphere, and Core Microbiomes in Theobroma cacao Seedlings1
A Characterization of a Cool-Climate Organic Vineyard’s Microbiome1
Exploring Diverse Approaches to Iterative Microbiome Passaging in Soil and Plant Systems1
Tare Soil Alters the Composition of the Developing Potato Rhizosphere Microbiome1
The Tomato's Tale: Exploring Taxonomy, Biogeography, Domestication, and Microbiome for Enhanced Resilience1
Full Issue PDF1
Getting to the Root of Tree Soil Microbiome Sampling1
Full Issue PDF1
Exploring the Role of Fungal Endophytes in the Sudden Death Syndrome of the Invasive Shrub Chrysanthemoides monilifera subsp. rotundata in Australia1
A New Oomycete Metabarcoding Method Using the rps10 Gene1
Fungicide-Mediated Shifts in the Foliar Fungal Community of an Invasive Grass1
Multigenerational Drought Reveals a Stable Wheat Seed Fungal Community1
Suppression of Phytophthora on Chamaecyparis in Sustainable Horticultural Substrates Depends on Fertilization and Is Linked to the Rhizobiome1
Full Issue PDF1
Mycobiome Shifts in Ulmus minor Stems After Infection with Beneficial and Pathogenic Fungi1
Endemism and Reemergence Potential of the Ipomovirus Sweet Potato Mild Mottle Virus (FamilyPotyviridae) in Eastern Africa: Half a Century of Mystery1
Exploring Microbial Dysbiosis in Orchards Affected by Little Cherry Disease1
0.033906936645508