Cell Chemical Biology

Papers
(The TQCC of Cell Chemical Biology is 13. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-02-01 to 2025-02-01.)
ArticleCitations
Modifying the antiviral innate immune response by selective writing, erasing, and reading of m6A on viral and cellular RNA137
30th anniversary celebrations: Inspiring innovation in biology and medicine119
CBLs downregulation foretells T cell ubiquitination leading to autoimmunity118
Therapeutic potential of inhibiting the PI3Kγ complex for leukemia111
Synthetic gene circuit evolution: Insights and opportunities at the mid-scale105
Tumor microenvironmental nutrients, cellular responses, and cancer95
Structure-kinetic relationship reveals the mechanism of selectivity of FAK inhibitors over PYK288
Engineering DNA-Templated Nonribosomal Peptide Synthesis81
The physiological and pathological roles of RNA modifications in T cells79
Restoring two tumor suppressor pathways with one PAWI76
New sheriff in town: Cyclic peptide inhibitors of a DUB module71
Antisense-mediated senseful regulation of orchestrated metabolic response69
Chemically Induced Cell Wall Stapling in Bacteria67
ND3 Cys39 in complex I is exposed during mitochondrial respiration57
Lipid-derived electrophiles mediate the effects of chemotherapeutic topoisomerase I poisons56
Identification of an inhibitory pocket in falcilysin provides a new avenue for malaria drug development54
Shining light on reprogramming Tregs for cancer therapy53
Advances and opportunities in targeted protein degradation52
Inhibition of Nonfunctional Ras51
Resistance of Mycobacterium tuberculosis to indole 4-carboxamides occurs through alterations in drug metabolism and tryptophan biosynthesis50
Cellular signals converge at the NOX2-SHP-2 axis to induce reductive carboxylation in cancer cells48
Identification of potent and reversible piperidine carboxamides that are species-selective orally active proteasome inhibitors to treat malaria48
Development of potent dimeric inhibitors of GAS41 YEATS domain48
A versatile residue numbering scheme for Nav and Cav channels48
FADS2-dependent fatty acid desaturation dictates cellular sensitivity to ferroptosis and permissiveness for hepatitis C virus replication48
Phenotypic technologies in stem cell biology47
Carolyn Bertozzi: Building new bonds between molecules, fields, and communities47
A genome-wide CRISPR-Cas9 screen identifies CENPJ as a host regulator of altered microtubule organization during Plasmodium liver infection45
Engineered protein-small molecule conjugates empower selective enzyme inhibition45
A new light on PLCβ!44
A transcriptional relationship with a natural product disrupts mitochondrial biogenesis44
Control of topoisomerase II activity and chemotherapeutic inhibition by TCA cycle metabolites43
An N terminomics toolbox combining 2-pyridinecarboxaldehyde probes and click chemistry for profiling protease specificity43
Profiling of drug resistance in Src kinase at scale uncovers a regulatory network coupling autoinhibition and catalytic domain dynamics42
Voices: Challenges and opportunities in regulating the immune system42
Multi-protein complexes as drug targets41
Profiling of MicroRNA Targets Using Activity-Based Protein Profiling: Linking Enzyme Activity to MicroRNA-185 Function40
How to kill an ERKsome target: PROTACs deliver the deathblow40
Inhibiting a dynamic viral protease by targeting a non-catalytic cysteine40
FLEX: genetically encodable enzymatic fluorescence signal amplification using engineered peroxidase39
Degrading the signal amplifier: ITK as a target for targeted protein degradation39
Thermal proteome profiling identifies the membrane-bound purinergic receptor P2X4 as a target of the autophagy inhibitor indophagolin37
Help! I need a WNT antibody. Help! Not just any antibody37
Meet the Authors: Christopher R. Mansfield and Emily R. Derbyshire35
Advancing protein therapeutics through proximity-induced chemistry35
HER2-targeted antibody-drug conjugate induces host immunity against cancer stem cells34
Generation of glycan-specific nanobodies34
The role of SERPIN citrullination in thrombosis33
Potent macrocycle inhibitors of the human SAGA deubiquitinating module33
Novel Frizzled-specific antibody-based Wnt mimetics and Wnt superagonists selectively activate WNT/β-catenin signaling in target tissues33
Targeting allostery in the Dynein motor domain with small molecule inhibitors33
Acute pharmacological degradation of ERK5 does not inhibit cellular immune response or proliferation33
CRAGE-CRISPR facilitates rapid activation of secondary metabolite biosynthetic gene clusters in bacteria32
Non-canonical function of histone methyltransferase G9a in the translational regulation of chronic inflammation31
Potent and selective binders of the E3 ubiquitin ligase ZNRF3 stimulate Wnt signaling and intestinal organoid growth31
An engineered cereblon optimized for high throughput screening and molecular glue discovery31
An E3 ligase guide to the galaxy of small-molecule-induced protein degradation31
K27-Linked Diubiquitin Inhibits UCHL3 via an Unusual Kinetic Trap30
TK216 targets microtubules in Ewing sarcoma cells30
The chemical tools for imaging dopamine release30
A highly selective, cell-permeable furin inhibitor BOS-318 rescues key features of cystic fibrosis airway disease30
An automatic pipeline for the design of irreversible derivatives identifies a potent SARS-CoV-2 Mpro inhibitor30
Making the cut with protease engineering29
Bioorthogonal dissection of the replicase assembly of hepatitis C virus29
A split-luciferase lysate-based approach to identify small-molecule modulators of phosphatase subunit interactions29
Chemoproteomics-enabled discovery of a covalent molecular glue degrader targeting NF-κB28
A Pseudomonas aeruginosa PQS quorum-sensing system inhibitor with anti-staphylococcal activity sensitizes polymicrobial biofilms to tobramycin28
ITK degradation to block T cell receptor signaling and overcome therapeutic resistance in T cell lymphomas28
Heterologous characterization of mechercharmycin A biosynthesis reveals alternative insights into post-translational modifications for RiPPs27
Transient hydroxycholesterol treatment restrains TCR signaling to promote long-term immunity27
Combined morphological and proteome profiling reveals target-independent impairment of cholesterol homeostasis27
Genetically incorporated crosslinkers identify regulators of membrane protein PD-L1 in mammalian cells26
New advisory board members speak on challenges and opportunities in chemical biology26
Motif-dependent immune co-receptor interactome profiling by photoaffinity chemical proteomics26
Next steps for targeted protein degradation25
Endogenous anti-tumorigenic nitro-fatty acids inhibit the ubiquitin-proteasome system by directly targeting the 26S proteasome25
Photoaffinity labeling coupled with proteomics identify PDI-ADAM17 module is targeted by (−)-vinigrol to induce TNFR1 shedding and ameliorate rheumatoid arthritis in mice25
Substrate-dependent interaction of SPOP and RACK1 aggravates cardiac fibrosis following myocardial infarction25
Advances in spatial proteomics: Mapping proteome architecture from protein complexes to subcellular localizations25
HATS off to KAT6A/B inhibitors: A new way to target estrogen-receptor-positive breast cancer25
Identification of proteomic landscape of drug-binding proteins in live cells by proximity-dependent target ID25
Exploiting ubiquitin ligase cereblon as a target for small-molecule compounds in medicine and chemical biology24
IFNα primes cancer cells for Fusicoccin-induced cell death via 14-3-3 PPI stabilization24
Generation of an anticoagulant aptamer that targets factor V/Va and disrupts the FVa-membrane interaction in normal and COVID-19 patient samples24
The impact of iron and heme availability on the healthy human gut microbiome in vivo and in vitro24
HSP90 Inhibition Enhances Cancer Immunotherapy by Modulating the Surface Expression of Multiple Immune Checkpoint Proteins24
Screening compound libraries for H2O2-mediated cancer therapeutics using a peroxiredoxin-based sensor24
Structural and mechanistic investigations of protein S-glycosyltransferases23
Interrogating direct NLRP3 engagement and functional inflammasome inhibition using cellular assays23
How to untie G-quadruplex knots and why?23
Integrating inflammatory biomarker analysis and artificial-intelligence-enabled image-based profiling to identify drug targets for intestinal fibrosis22
3D two-photon brain imaging reveals dihydroartemisinin exerts antiepileptic effects by modulating iron homeostasis22
Development of potent and selective inhibitors targeting the papain-like protease of SARS-CoV-222
Rapamycin targets STAT3 and impacts c-Myc to suppress tumor growth22
Identifying and antagonizing the interactions between layilin and glycosylated collagens22
Dual-pharmacophore artezomibs hijack the Plasmodium ubiquitin-proteasome system to kill malaria parasites while overcoming drug resistance22
Acriflavine, a clinically approved drug, inhibits SARS-CoV-2 and other betacoronaviruses22
Peptidoglycan NlpC/P60 peptidases in bacterial physiology and host interactions22
Avoid the trap: Targeting PARP1 beyond human malignancy22
A SUMO1-Derived Peptide Targeting SUMO-Interacting Motif Inhibits α-Synuclein Aggregation21
Development of a potent and selective chemical probe for the pleiotropic kinase CK221
Discovery and biosynthesis of non-canonical C16-terpenoids from Pseudomonas21
Regulation of the endocytosis and prion-chaperoning machineries by yeast E3 ubiquitin ligase Rsp5 as revealed by orthogonal ubiquitin transfer21
Multiparatopic antibodies induce targeted downregulation of programmed death-ligand 121
HER-096 is a CDNF-derived brain-penetrating peptidomimetic that protects dopaminergic neurons in a mouse synucleinopathy model of Parkinson’s disease21
A direct high-throughput protein quantification strategy facilitates discovery and characterization of a celastrol-derived BRD4 degrader21
Targeted degradation of transcription factors by TRAFTACs: TRAnscription Factor TArgeting Chimeras21
Host specific sphingomyelin is critical for replication of diverse RNA viruses21
Covalent targeting of splicing in T cells20
Identification of two repurposed drugs targeting GSDMD oligomerization interface I to block pyroptosis20
Small molecules targeting selective PCK1 and PGC-1α lysine acetylation cause anti-diabetic action through increased lactate oxidation20
Engineering acyclovir-induced RNA nanodevices for reversible and tunable control of aptamer function20
2′-OH as a universal handle for studying intracellular RNAs19
Chemoproteomic profiling of substrate specificity in gut microbiota-associated bile salt hydrolases19
Human AKR1C3 binds agonists of GPR84 and participates in an expanded polyamine pathway19
Targeting non-canonical pathways as a strategy to modulate the sodium iodide symporter19
Excited to see you: New imaging approaches to detect ferrous iron in vivo19
Autotaxin facilitates selective LPA receptor signaling19
Break Away: FKBP12 sequestration as a target for increasing BMP activity18
The chemistry of electrical signaling in sodium channels from bacteria and beyond18
Integration of metabolism and regulation reveals rapid adaptability to growth on non-native substrates18
Using chemical biology for targeting cancer18
Early DNA damage detection and cellular autophagy as drivers of stress-adaptive H2S production: A paradox resolved18
Meet the authors: Xueqin Jin, Jian Huang, Huan Wang, Kan Wang, and Nieng Yan18
Un-FASN-ing cancer’s seat belt: Linking lipid metabolism and antigen presentation18
Sweet sensation: Developing a single-cell fluorescent reporter of glycolytic heterogeneity18
Photoaffinity Labeling and Quantitative Chemical Proteomics Identify LXRβ as the Functional Target of Enhancers of Astrocytic apoE18
Heterogeneity of tethered agonist signaling in adhesion G protein-coupled receptors18
Anaerobic purinolytic enzymes enable dietary purine clearance by engineered gut bacteria18
AspSnFR: A genetically encoded biosensor for real-time monitoring of aspartate in live cells18
Chemical control of multidomain acetyltransferase activity17
A double on the Rocs with a twist: Rocaglamide A targets multiple DEAD-box helicases to inhibit translation initiation17
Resolving the deceptive isoform and complex selectivity of HDAC1/2 inhibitors17
Chemically modified guide RNAs enhance CRISPR-Cas13 knockdown in human cells17
Lockdown, a selective small-molecule inhibitor of the integrin phosphatase PPM1F, blocks cancer cell invasion17
Cell-selective bioorthogonal labeling17
Ferroptosis inhibition by oleic acid mitigates iron-overload-induced injury17
When CDK4/6i meets GPX4i: Stop dividing to die iron hard17
The role of reversible and irreversible covalent chemistry in targeted protein degradation17
Biogenesis and roles of tRNA queuosine modification and its glycosylated derivatives in human health and diseases17
Chemical proteomics to study metabolism, a reductionist approach applied at the systems level17
Periplasmic expression of SpyTagged antibody fragments enables rapid modular antibody assembly16
Identification of small molecules that strongly inhibit bacterial quorum sensing using a high-throughput lipid vesicle lysis assay16
Fishing for a balance: Toward promyelinating drug discovery16
Real-time non-invasive fluorescence imaging of gut commensal bacteria to detect dynamic changes in the microbiome of live mice16
Meet the Authors: Harkamal S. Jhajj and Peter M. Tessier16
Endogenous vitamin E metabolites mediate allosteric PPARγ activation with unprecedented co-regulatory interactions16
Targeting VPS41 induces methuosis and inhibits autophagy in cancer cells16
Allosteric regulation of DNA binding and target residence time drive the cytotoxicity of phthalazinone-based PARP-1 inhibitors16
Mechanisms by which microbiome-derived metabolites exert their impacts on neurodegeneration15
Localization matters in targeted protein degradation15
β-hydroxybutyrate is a metabolic regulator of proteostasis in the aged and Alzheimer disease brain15
Anti-tumor immunotherapy using engineered bacterial outer membrane vesicles fused to lysosome-targeting chimeras mediated by transferrin receptor15
Dissecting the neuroprotective interaction between the BH4 domain of BCL-w and the IP3 receptor15
From Screening to Targeted Degradation: Strategies for the Discovery and Optimization of Small Molecule Ligands for PCSK914
Peptide-mediated inhibition of the transcriptional regulator Elongin BC induces apoptosis in cancer cells14
Antiplasmodial peptaibols act through membrane directed mechanisms14
Profiling nuclear cysteine ligandability and effects on nuclear localization using proximity labeling-coupled chemoproteomics14
Nuisance compounds in cellular assays14
The Plasmodium falciparum ABC transporter ABCI3 confers parasite strain-dependent pleiotropic antimalarial drug resistance14
Chemoproteomic profiling to identify activity changes and functional inhibitors of DNA-binding proteins14
Catalytic spike antibodies: A new paradigm in neutralization14
Targeting N-Myc in neuroblastoma with selective Aurora kinase A degraders14
Integrated genomics and chemical biology herald an era of sophisticated antibacterial discovery, from defining essential genes to target elucidation14
PARP trapping is governed by the PARP inhibitor dissociation rate constant14
Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input14
Beyond antibiotic resistance: The whiB7 transcription factor coordinates an adaptive response to alanine starvation in mycobacteria13
Tracking the PROTAC degradation pathway in living cells highlights the importance of ternary complex measurement for PROTAC optimization13
Dual targeting of DDX3 and eIF4A by the translation inhibitor rocaglamide A13
Proteomics of broad deubiquitylase inhibition unmasks redundant enzyme function to reveal substrates and assess enzyme specificity13
Targeting selective E3 ligase for healing cardiac fibrosis13
A phospholipid mimetic targeting LRH-1 ameliorates colitis13
In-depth characterization of ubiquitin turnover in mammalian cells by fluorescence tracking13
Synergistic PIM kinase and proteasome inhibition as a therapeutic strategy for MYC-overexpressing triple-negative breast cancer13
Identification of triazenyl indoles as inhibitors of fungal fatty acid biosynthesis with broad-spectrum activity13
Combating the myth of “innate genius” in science13
Voices: Challenges and opportunities for bioorthogonal chemistry13
Metabolic targeting of cancer by a ubiquinone uncompetitive inhibitor of mitochondrial complex I13
Increased energy demand from anabolic-catabolic processes drives β-lactam antibiotic lethality13
Lenalidomide bypasses CD28 co-stimulation to reinstate PD-1 immunotherapy by activating Notch signaling13
Utilizing directed evolution to interrogate and optimize CRISPR/Cas guide RNA scaffolds13
PALP: A rapid imaging technique for stratifying ferroptosis sensitivity in normal and tumor tissues in situ13
Intracellular H2S production is an autophagy-dependent adaptive response to DNA damage13
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