OOIR: Observatory of International Research

Papers

(The H4-Index of Communications Biology is 64. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-03-01 to 2024-03-01.)

Article	Citations
DeepEMhancer: a deep learning solution for cryo-EM volume post-processing	523
BrainSpace: a toolbox for the analysis of macroscale gradients in neuroimaging and connectomics datasets	265
A comprehensive review on plasmonic-based biosensors used in viral diagnostics	255
Single-cell and spatial transcriptomics enables probabilistic inference of cell type topography	248
Single-cell transcriptomes of the human skin reveal age-related loss of fibroblast priming	230
Second-generation lung-on-a-chip with an array of stretchable alveoli made with a biological membrane	160
pH-responsive high stability polymeric nanoparticles for targeted delivery of anticancer therapeutics	158
Identification of 3-chymotrypsin like protease (3CLPro) inhibitors as potential anti-SARS-CoV-2 agents	150
Activation of mitochondrial TUFM ameliorates metabolic dysregulation through coordinating autophagy induction	150
Ionization and structural properties of mRNA lipid nanoparticles influence expression in intramuscular and intravascular administration	147
Mapping the immune environment in clear cell renal carcinoma by single-cell genomics	135
SARS-CoV-2 infection induces a pro-inflammatory cytokine response through cGAS-STING and NF-κB	124
Extended pharmacodynamic responses observed upon PROTAC-mediated degradation of RIPK2	124
Towards organoid culture without Matrigel	123
Role of sleep deprivation in immune-related disease risk and outcomes	121
Identification of SARS-CoV-2 inhibitors targeting Mpro and PLpro using in-cell-protease assay	115
The antimicrobial potential of cannabidiol	112
Amplification-free RNA detection with CRISPR–Cas13	112
Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities	105
Sex differences in SARS-CoV-2 infection rates and the potential link to prostate cancer	104
Human ACE2 receptor polymorphisms and altered susceptibility to SARS-CoV-2	102
Analysis of SARS-CoV-2 mutations in the United States suggests presence of four substrains and novel variants	102
NetTCR-2.0 enables accurate prediction of TCR-peptide binding by using paired TCRα and β sequence data	100
Tetracycline-inactivating enzymes from environmental, human commensal, and pathogenic bacteria cause broad-spectrum tetracycline resistance	95
Comparative ACE2 variation and primate COVID-19 risk	94

Cells grown in three-dimensional spheroids mirror in vivo metabolic response of epithelial cells	90
Fatty-acid-induced FABP5/HIF-1 reprograms lipid metabolism and enhances the proliferation of liver cancer cells	89
Evolution of antibiotic resistance at low antibiotic concentrations including selection below the minimal selective concentration	89
Interaction of SHP-2 SH2 domains with PD-1 ITSM induces PD-1 dimerization and SHP-2 activation	88
Newly discovered Synechococcus sp. PCC 11901 is a robust cyanobacterial strain for high biomass production	87
Climate-change-driven growth decline of European beech forests	87
Temporal sequences of brain activity at rest are constrained by white matter structure and modulated by cognitive demands	86
Genomic and transcriptomic variation defines the chromosome-scale assembly of Haemonchus contortus, a model gastrointestinal worm	86
Molecular basis for the disruption of Keap1–Nrf2 interaction via Hinge & Latch mechanism	84
The genetic architecture of appendicular lean mass characterized by association analysis in the UK Biobank study	83
Human ACE2 peptide-mimics block SARS-CoV-2 pulmonary cells infection	82
Brains and algorithms partially converge in natural language processing	82
Telomere-to-telomere gapless chromosomes of banana using nanopore sequencing	82
SARS-CoV-2 specific antibody and neutralization assays reveal the wide range of the humoral immune response to virus	81
Large-scale integration of single-cell transcriptomic data captures transitional progenitor states in mouse skeletal muscle regeneration	81
From whole-mount to single-cell spatial assessment of gene expression in 3D	81
Improved designs for pET expression plasmids increase protein production yield in Escherichia coli	80
Temporal association between human upper respiratory and gut bacterial microbiomes during the course of COVID-19 in adults	80
Training instance segmentation neural network with synthetic datasets for crop seed phenotyping	79
Robust estimation of bacterial cell count from optical density	79
Simple and effective serum-free medium for sustained expansion of bovine satellite cells for cell cultured meat	79
PD-1 derived CA-170 is an oral immune checkpoint inhibitor that exhibits preclinical anti-tumor efficacy	78
Met-Flow, a strategy for single-cell metabolic analysis highlights dynamic changes in immune subpopulations	76
Inhibition of the CCL2 receptor, CCR2, enhances tumor response to immune checkpoint therapy	76
Integration of substrate- and flow-derived stresses in endothelial cell mechanobiology	73
ExoSTING, an extracellular vesicle loaded with STING agonists, promotes tumor immune surveillance	72
Prioritization of candidate causal genes for asthma in susceptibility loci derived from UK Biobank	72
Single-cell analysis supports a luminal-neuroendocrine transdifferentiation in human prostate cancer	70
A framework for identifying the recent origins of mobile antibiotic resistance genes	69
A genome-wide meta-analysis yields 46 new loci associating with biomarkers of iron homeostasis	69
A miRNA-based diagnostic model predicts resectable lung cancer in humans with high accuracy	68
Accelerating antibiotic discovery through artificial intelligence	68
A haplotype-led approach to increase the precision of wheat breeding	68
Cryo-EM structure of type 1 IP3R channel in a lipid bilayer	67
Tipiracil binds to uridine site and inhibits Nsp15 endoribonuclease NendoU from SARS-CoV-2	66
Multiple impacts of microplastics can threaten marine habitat-forming species	66
Maize GOLDEN2-LIKE genes enhance biomass and grain yields in rice by improving photosynthesis and reducing photoinhibition	65
Type I toxin-antitoxin systems contribute to the maintenance of mobile genetic elements in Clostridioides difficile	65
High frequency acoustic cell stimulation promotes exosome generation regulated by a calcium-dependent mechanism	64