mSphere

Article	Citations
Primer, Pipelines, Parameters: Issues in 16S rRNA Gene Sequencing	176
New Insights and Enhanced Human Norovirus Cultivation in Human Intestinal Enteroids	89
Amplicon Sequence Variants Artificially Split Bacterial Genomes into Separate Clusters	88
Environmental Consortium Containing Pseudomonas and Bacillus Species Synergistically Degrades Polyethylene Terephthalate Plastic	74
Long-Term Evolution of SARS-CoV-2 in an Immunocompromised Patient with Non-Hodgkin Lymphoma	65
Direct Antibiotic Activity of Bacillibactin Broadens the Biocontrol Range of Bacillus amyloliquefaciens MBI600	64
Emergence of Multiple SARS-CoV-2 Antibody Escape Variants in an Immunocompromised Host Undergoing Convalescent Plasma Treatment	63
Muribaculaceae Genomes Assembled from Metagenomes Suggest Genetic Drivers of Differential Response to Acarbose Treatment in Mice	60
Pharmacokinetics and Efficacy of a Potential Smallpox Therapeutic, Brincidofovir, in a Lethal Monkeypox Virus Animal Model	57
Pseudomonas Quinolone Signal-Induced Outer Membrane Vesicles Enhance Biofilm Dispersion in Pseudomonas aeruginosa	52
A Toxic Friend: Genotoxic and Mutagenic Activity of the Probiotic Strain Escherichia coli Nissle 1917	48
Epidemiology of Multidrug-Resistant Pseudomonas aeruginosa in the Middle East and North Africa Region	47
Daily Viral Kinetics and Innate and Adaptive Immune Response Assessment in COVID-19: a Case Series	46
Term Human Placental Trophoblasts Express SARS-CoV-2 Entry Factors ACE2, TMPRSS2, and Furin	44
Distribution of Antimicrobial Resistance and Virulence Genes within the Prophage-Associated Regions in Nosocomial Pathogens	42
Stable-Isotope-Informed, Genome-Resolved Metagenomics Uncovers Potential Cross-Kingdom Interactions in Rhizosphere Soil	42
Human Basigin (CD147) Does Not Directly Interact with SARS-CoV-2 Spike Glycoprotein	41
A Genome Epidemiological Study of SARS-CoV-2 Introduction into Japan	40
African Swine Fever Virus F317L Protein Inhibits NF-κB Activation To Evade Host Immune Response and Promote Viral Replication	40
OXA-181-Like Carbapenemases in Klebsiella pneumoniae ST14, ST15, ST23, ST48, and ST231 from Septicemic Neonates: Coexistence with NDM-5, Resistome, Transmissibility, and Genome Diversity	40
Emergence of Hypervirulent Carbapenem-Resistant Klebsiella pneumoniae Coharboring a bla NDM-1 -Carrying Virulent Plasmid and a bla<	40
High-Surety Isothermal Amplification and Detection of SARS-CoV-2	37
Ecological Role of Bacteria Involved in the Biogeochemical Cycles of Mangroves Based on Functional Genes Detected through GeoChip 5.0	36
A Transferable IncC-IncX3 Hybrid Plasmid Cocarrying bla NDM-4 , tet (X), and tmexCD3-toprJ3	35
An Assessment of Siderophore Production, Mucoviscosity, and Mouse Infection Models for Defining the Virulence Spectrum of Hypervirulent Klebsiella pneumoniae	35

Helicobacter pylori and Epstein-Barr Virus Coinfection Stimulates Aggressiveness in Gastric Cancer through the Regulation of Gankyrin	34
Conserved Genomic Terminals of SARS-CoV-2 as Coevolving Functional Elements and Potential Therapeutic Targets	34
Why Is the Biodegradation of Polyfluorinated Compounds So Rare?	34
Candida auris Cell Wall Mannosylation Contributes to Neutrophil Evasion through Pathways Divergent from Candida albicans and Candida glabrata	33
Assembly of the Populus Microbiome Is Temporally Dynamic and Determined by Selective and Stochastic Factors	33
Original Antigenic Sin: the Downside of Immunological Memory and Implications for COVID-19	32
Interplay of Antibody and Cytokine Production Reveals CXCL13 as a Potential Novel Biomarker of Lethal SARS-CoV-2 Infection	32
Detection of Five mcr-9 -Carrying Enterobacterales Isolates in Four Czech Hospitals	31
Ceftolozane/Tazobactam Resistance and Mechanisms in Carbapenem-Nonsusceptible Pseudomonas aeruginosa	30
Outer Membrane Vesicles Protect Gram-Negative Bacteria against Host Defense Peptides	30
Staphylococcus epidermidis Phages Transduce Antimicrobial Resistance Plasmids and Mobilize Chromosomal Islands	30
Amylases in the Human Vagina	30
Mycobacterium tuberculosis PE_PGRS20 and PE_PGRS47 Proteins Inhibit Autophagy by Interaction with Rab1A	29
Extensive Genetic Diversity and Widespread Azole Resistance in Greenhouse Populations of Aspergillus fumigatus in Yunnan, China	29
Replication Kinetics, Cell Tropism, and Associated Immune Responses in SARS-CoV-2- and H5N1 Virus-Infected Human Induced Pluripotent Stem Cell-Derived Neural Models	28
PARIS and SPARTA: Finding the Achilles’ Heel of SARS-CoV-2	28
The Polyphosphate Kinase of Escherichia coli Is Required for Full Production of the Genotoxin Colibactin	28
Machine Learning of All Mycobacterium tuberculosis H37Rv RNA-seq Data Reveals a Structured Interplay between Metabolism, Stress Response, and Infection	28
The Stability of Model Human Coronaviruses on Textiles in the Environment and during Health Care Laundering	27
Sex Disparities and Neutralizing-Antibody Durability to SARS-CoV-2 Infection in Convalescent Individuals	27
Microbiome Analysis Reveals Diversity and Function of Mollicutes Associated with the Eastern Oyster, Crassostrea virginica	27
A Comprehensive Map of Mycobacterium tuberculosis Complex Regions of Difference	27
Human Cytomegalovirus UL7, miR-US5-1, and miR-UL112-3p Inactivation of FOXO3a Protects CD34 + Hematopoietic Progenitor Cells from Apoptosis	27
Dasabuvir Inhibits Human Norovirus Infection in Human Intestinal Enteroids	26
Randomized Controlled Trial of Oral Vancomycin Treatment in Clostridioides difficile-Colonized Patients	26
Interactions of the Nipah Virus P, V, and W Proteins across the STAT Family of Transcription Factors	26
Quantitative Assessment of Nucleocytoplasmic Large DNA Virus and Host Interactions Predicted by Co-occurrence Analyses	25
Soil Health Management Enhances Microbial Nitrogen Cycling Capacity and Activity	25
Seroprevalence of SARS-CoV-2 Antibodies in Children and Adults in St. Louis, Missouri, USA	25
Hydrogen Peroxide Production by Streptococcus pneumoniae Results in Alpha-hemolysis by Oxidation of Oxy-hemoglobin to Met-hemoglobin	25
A 21-Year Survey of Escherichia coli from Bloodstream Infections (BSI) in a Tertiary Hospital Reveals How Community-Hospital Dynamics of B2 Phylogroup Clones Influence Local BSI Rates	25
Undervalued Pseudo- nifH Sequences in Public Databases Distort Metagenomic Insights into Biological Nitrogen Fixers	24
Host-Environment Interplay Shapes Fungal Diversity in Mosquitoes	24
Widespread Prevalence of Plasmid-Mediated Colistin Resistance Gene mcr-1 in Escherichia coli from Père David's Deer in China	24
A Novel SXT/R391 Integrative and Conjugative Element Carries Two Copies of the bla NDM-1 Gene in Proteus mirabilis	24
Measurement of Klebsiella Intestinal Colonization Density To Assess Infection Risk	24
Evenness-Richness Scatter Plots: a Visual and Insightful Representation of Shannon Entropy Measurements for Ecological Community Analysis	24
The ABC-Type Efflux Pump MacAB Is Involved in Protection of Serratia marcescens against Aminoglycoside Antibiotics, Polymyxins, and Oxidative Stress	24
Intravital Imaging of Candida albicans Identifies Differential In Vitro and In Vivo Filamentation Phenotypes for Transcription Factor Dele	23
Temperature Influences the Composition and Cytotoxicity of Extracellular Vesicles in Staphylococcus aureus	23
Monitoring COVID-19 Transmission Risks by Quantitative Real-Time PCR Tracing of Droplets in Hospital and Living Environments	23
Covariation of the Fecal Microbiome with Diet in Nonpasserine Birds	23
A Novel N4-Like Bacteriophage Isolated from a Wastewater Source in South India with Activity against Several Multidrug-Resistant Clinical Pseudomonas aeruginosa Isolates	22
Toxoplasma gondii AP2XII-2 Contributes to Transcriptional Repression for Sexual Commitment	22
Both Pseudomonas aeruginosa and Candida albicans Accumulate Greater Biomass in Dual-Species Biofilms under Flow	22
Dissemination and Stability of the bla NDM-5 -Carrying IncX3-Type Plasmid among Multiclonal Klebsiella pneumoniae Isolates	22
Additional Feeding Reveals Differences in Immune Recognition and Growth of Plasmodium Parasites in the Mosquito Host	22
The Two-Component System CopRS Maintains Subfemtomolar Levels of Free Copper in the Periplasm of Pseudomonas aeruginosa Using a Phosphatase-Based Mechanism	22
Meconium Microbiome of Very Preterm Infants across Germany	22
A Novel Phage Infecting Alteromonas Represents a Distinct Group of Siphophages Infecting Diverse Aquatic Copiotrophs	22

Cryptic β-Lactamase Evolution Is Driven by Low β-Lactam Concentrations	22
Genes Influencing Phage Host Range in Staphylococcus aureus on a Species-Wide Scale	22
A Prioritized and Validated Resource of Mitochondrial Proteins in Plasmodium Identifies Unique Biology	22
Cross-Hemisphere Study Reveals Geographically Ubiquitous, Plastic-Specific Bacteria Emerging from the Rare and Unexplored Biosphere	21
Predicting COVID-19 Severity with a Specific Nucleocapsid Antibody plus Disease Risk Factor Score	21
Staphylococcus aureus Arsenal To Conquer the Lower Respiratory Tract	21
Genomic Epidemiology and Evolution of Escherichia coli in Wild Animals in Mexico	21
Whole-Genome Sequence Analysis of an Extensively Drug-Resistant Salmonella enterica Serovar Agona Isolate from an Australian Silver Gull (Chroicocephalus novaehollandiae) Reveals the Acquisitio	21
Skin Metagenomic Sequence Analysis of Early Candida auris Outbreaks in U.S. Nursing Homes	21
Candida auris Bloodstream Infection Induces Upregulation of the PD-1/PD-L1 Immune Checkpoint Pathway in an Immunocompetent Mouse Model	21
Stability of SARS-CoV-2 Spike G614 Variant Surpasses That of the D614 Variant after Cold Storage	21
Longitudinal and quantitative fecal shedding dynamics of SARS-CoV-2, pepper mild mottle virus, and crAssphage	20
Pathogenesis Study of Enterovirus 71 Using a Novel Human SCARB2 Knock-In Mouse Model	20
Gastric Non-Helicobacter pylori Urease-Positive Staphylococcus epidermidis and Streptococcus salivarius Isolated from Humans Have Contrasting Effects on H. pylori-Associated Gastric Pathology and Host	20
Establishment of Culex modestus in Belgium and a Glance into the Virome of Belgian Mosquito Species	20
Sediment Metagenomes as Time Capsules of Lake Microbiomes	20
Comparison of Fecal Collection Methods on Variation in Gut Metagenomics and Untargeted Metabolomics	20
Predominance of Atopobium vaginae at Midtrimester: a Potential Indicator of Preterm Birth Risk in a Nigerian Cohort	20
PhenoGMM: Gaussian Mixture Modeling of Cytometry Data Quantifies Changes in Microbial Community Structure	20
Metabolites with SARS-CoV-2 Inhibitory Activity Identified from Human Microbiome Commensals	19
Seasonal Dietary Shifts Alter the Gut Microbiota of Avivorous Bats: Implication for Adaptation to Energy Harvest and Nutritional Utilization	19
IMMUNO-COV v2.0: Development and Validation of a High-Throughput Clinical Assay for Measuring SARS-CoV-2-Neutralizing Antibody Titers	19
Cellular Management of Zinc in Group B Streptococcus Supports Bacterial Resistance against Metal Intoxication and Promotes Disseminated Infection	19
Association of Diverse Staphylococcus aureus Populations with Pseudomonas aeruginosa Coinfection and Inflammation in Cystic Fibrosis Airway Infection	19
Role of Microbiota in the Skin Colonization of Candida auris	19
Characterization of the Type I Restriction Modification System Broadly Conserved among Group A Streptococci	19
Factors Influencing Distribution of Coccidioides immitis in Soil, Washington State, 2016	19
Risk Factors for Klebsiella Infections among Hospitalized Patients with Preexisting Colonization	19
Optimizing Nanopore Sequencing for Rapid Detection of Microbial Species and Antimicrobial Resistance in Patients at Risk of Surgical Site Infections	19
Transcriptional Profiling of the Candida auris Response to Exogenous Farnesol Exposure	19
Lsr2 and Its Novel Paralogue Mediate the Adjustment of Mycobacterium smegmatis to Unfavorable Environmental Conditions	19
Pyoverdine Inhibitors and Gallium Nitrate Synergistically Affect Pseudomonas aeruginosa	18
HIV-1 Infection Alters the Viral Composition of Plasma in Men Who Have Sex with Men	18
Bacterial Quorum-Sensing Signal Arrests Phytoplankton Cell Division and Impacts Virus-Induced Mortality	18
APEX2 Proximity Proteomics Resolves Flagellum Subdomains and Identifies Flagellum Tip-Specific Proteins in Trypanosoma brucei	18
Complete Genome Sequencing of Acinetobacter baumannii AC1633 and Acinetobacter nosocomialis AC1530 Unveils a Large Multidrug-Resistant Plasmid Encoding the NDM-1 and OXA-58 Carbapenemases	18
Chromatin-Associated Protein Complexes Link DNA Base J and Transcription Termination in Leishmania	18
Diversity of Pseudomonas aeruginosa Temperate Phages	18
Shedding of Viable Virus in Asymptomatic SARS-CoV-2 Carriers	18
Disinfection of Maternal Environments Is Associated with Piglet Microbiome Composition from Birth to Weaning	18
Novel Immune Modulators Enhance Caenorhabditis elegans Resistance to Multiple Pathogens	18
Selective Whole-Genome Amplification as a Tool to Enrich Specimens with Low Treponema pallidum Genomic DNA Copies for Whole-Genome Sequencing	18
The Serological Sciences Network (SeroNet) for COVID-19: Depth and Breadth of Serology Assays and Plans for Assay Harmonization	18
Synergism and Antagonism of Bacterial-Viral Coinfection in the Upper Respiratory Tract	18
Inhibition of Three Potato Pathogens by Phenazine-Producing Pseudomonas spp. Is Associated with Multiple Biocontrol-Related Traits	18
Zika Virus Hijacks Extracellular Vesicle Tetraspanin Pathways for Cell-to-Cell Transmission	17
Escherichia coli Nissle 1917 Enhances Innate and Adaptive Immune Responses in a Ciprofloxacin-Treated Defined-Microbiota Piglet Model of Human Rotavirus Infection	17
A Cytopathic Effect-Based Tissue Culture Method for HCoV-OC43 Titration Using TMPRSS2-Expressing VeroE6 Cells	17
Prophage-Dependent Neighbor Predation Fosters Horizontal Gene Transfer by Natural Transformation	17
Antibody Response against SARS-CoV-2 and Seasonal Coronaviruses in Nonhospitalized COVID-19 Patients	17
Identification and Characterization of Novel Antibody Epitopes on the N2 Neuraminidase	17
Citizen Science Provides an Efficient Method for Broad-Scale Tick-Borne Pathogen Surveillance of Ixodes pacificus and Ixodes scapularis across the United States	17
Clearance of Clostridioides difficile Colonization Is Associated with Antibiotic-Specific Bacterial Changes	17
Comprehensive Bioinformatic Assessments of the Variability of Neisseria gonorrhoeae Vaccine Candidates	17
Mobile Elements Harboring Heavy Metal and Bacitracin Resistance Genes Are Common among Listeria monocytogenes Strains Persisting on Dairy Farms	17
Genetic Analysis of Sirtuin Deacetylases in Hyphal Growth of Candida albicans	17
Human Respiratory Syncytial Virus Subgroup A and B Infections in Nasal, Bronchial, Small-Airway, and Organoid-Derived Respiratory Cultures	17
Staphylococcus aureus Responds to Physiologically Relevant Temperature Changes by Altering Its Global Transcript and Protein Profile	17
Comparative Genomics Reveals Prophylactic and Catabolic Capabilities of Actinobacteria within the Fungus-Farming Termite Symbiosis	17
Coexpression of MmpS5 and MmpL5 Contributes to Both Efflux Transporter MmpL5 Trimerization and Drug Resistance in Mycobacterium tuberculosis	17
Amplicon and Metagenomic Analysis of Middle East Respiratory Syndrome (MERS) Coronavirus and the Microbiome in Patients with Severe MERS	16
The Cytospora chrysosperma Virulence Effector CcCAP1 Mainly Localizes to the Plant Nucleus To Suppress Plant Immune Responses	16
Machine Learning Prediction and Experimental Validation of Antigenic Drift in H3 Influenza A Viruses in Swine	16
The Histone Deacetylases MoRpd3 and MoHst4 Regulate Growth, Conidiation, and Pathogenicity in the Rice Blast Fungus Magnaporthe oryzae	16
Coexistence of optrA and fexA in Campylobacter	16
Metagenomic Analysis of the Abundance and Composition of Antibiotic Resistance Genes in Hospital Wastewater in Benin, Burkina Faso, and Finland	16
SARS-CoV-2 B.1.1.7 Infection of Syrian Hamster Does Not Cause More Severe Disease, and Naturally Acquired Immunity Confers Protection	16
Mapping the Role of AcrAB-TolC Efflux Pumps in the Evolution of Antibiotic Resistance Reveals Near-MIC Treatments Facilitate Resistance Acquisition	16
Staphylococcus aureus Tolerance and Genomic Response to Photodynamic Inactivation	15
DeORFanizing Candida albicans Genes using Coexpression	15
Ehrlichia chaffeensis TRP120 Is a Wnt Ligand Mimetic That Interacts with Wnt Receptors and Contains a Novel Repetitive Short Linear Motif That Activates Wnt Signaling	15
Rhinovirus Reduces the Severity of Subsequent Respiratory Viral Infections by Interferon-Dependent and -Independent Mechanisms	15
The Stickland Reaction Precursor trans -4-Hydroxy- l -Proline Differentially Impacts the Metabolism of Clostridioides difficile and Co	15
A Pilot Study of Microbial Succession in Human Rib Skeletal Remains during Terrestrial Decomposition	15
Neutralizing Staphylococcus aureus Virulence with AZD6389, a Three mAb Combination, Accelerates Closure of a Diabetic Polymicrobial Wound	15
Disentangling the Relative Roles of Vertical Transmission, Subsequent Colonizations, and Diet on Cockroach Microbiome Assembly	15
Phage Resistance Accompanies Reduced Fitness of Uropathogenic Escherichia coli in the Urinary Environment	15
Quantifying the Impact of Human Leukocyte Antigen on the Human Gut Microbiota	15
Heliorhodopsin Evolution Is Driven by Photosensory Promiscuity in Monoderms	15
Penicillin Binding Proteins and β-Lactamases of Mycobacterium tuberculosis: Reexamination of the Historical Paradigm	15

Correction for Hutson et al., “Pharmacokinetics and Efficacy of a Potential Smallpox Therapeutic, Brincidofovir, in a Lethal Monkeypox Virus Animal Model”	15
Time of Day for Harvest Affects the Fermentation Parameters, Bacterial Community, and Metabolic Characteristics of Sorghum-Sudangrass Hybrid Silage	15
Cold Atmospheric Plasma Promotes Killing of Staphylococcus aureus by Macrophages	15
An Observational Laboratory-Based Assessment of SARS-CoV-2 Molecular Diagnostics in Benin, Western Africa	14
Tongue Microbiota Composition and Dental Caries Experience in Primary School Children	14
Targeted Conservative Cointegrate Formation Mediated by IS 26 Family Members Requires Sequence Identity at the Reacting End	14
Host-Like Conditions Are Required for T6SS-Mediated Competition among Vibrio fischeri Light Organ Symbionts	14
Antibiotics Drive Expansion of Rare Pathogens in a Chronic Infection Microbiome Model	14
Amplicon Sequencing-Based Bipartite Network Analysis Confirms a High Degree of Specialization and Modularity for Fungi and Prokaryotes in Deadwood	14
Dental Plaque Microbial Resistomes of Periodontal Health and Disease and Their Changes after Scaling and Root Planing Therapy	14
Combinatorial Biosynthesis of Sulfated Benzenediol Lactones with a Phenolic Sulfotransferase from Fusarium graminearum PH-1	14
Emergence of Plasmid-Mediated Resistance Genes tet (X) and mcr-1 in Escherichia coli Clinical Isolates from Pakistan	14
Phage-Encoded Sigma Factors Alter Bacterial Dormancy	14
Gut Bacteria Shared by Children and Their Mothers Associate with Developmental Level and Social Deficits in Autism Spectrum Disorder	14
A 39-Amino-Acid C-Terminal Truncation of GDV1 Disrupts Sexual Commitment in Plasmodium falciparum	14
Evaluating the Antimicrobial Properties of Commercial Hand Sanitizers	14
Human Milk Oligosaccharides Reduce Murine Group BStreptococcusVaginal Colonization with Minimal Impact on the Vaginal Microbiota	14
Analysis of Serial Multidrug-Resistant Tuberculosis Strains Causing Treatment Failure and Within-Host Evolution by Whole-Genome Sequencing	14
Novel Effective Bacillus cereus Group Species “ Bacillus clarus ” Is Represented by Antibiotic-Producing Strain ATCC 21929 Isolated from Soil	14
Blocking Palmitoylation of Toxoplasma gondii Myosin Light Chain 1 Disrupts Glideosome Composition but Has Little Impact on Parasite Motility	14
Contribution of Membrane Vesicle to Reprogramming of Bacterial Membrane Fluidity in Pseudomonas aeruginosa	14
Novel Daptomycin Tolerance and Resistance Mutations in Methicillin-Resistant Staphylococcus aureus from Adaptive Laboratory Evolution	14
Repressed Ang 1–7 in COVID-19 Is Inversely Associated with Inflammation and Coagulation	13
Machine Learning of Bacterial Transcriptomes Reveals Responses Underlying Differential Antibiotic Susceptibility	13
Stepwise Evolution of a Klebsiella pneumoniae Clone within a Host Leading to Increased Multidrug Resistance	13
Effects of Mucin and DNA Concentrations in Airway Mucus on Pseudomonas aeruginosa Biofilm Recalcitrance	13
High Seropositivity Rate of Neutralizing Antibodies to Astrovirus VA1 in Human Populations	13
The Colorectal Cancer Microbiota Alter Their Transcriptome To Adapt to the Acidity, Reactive Oxygen Species, and Metabolite Availability of Gut Microenvironments	13
Functional Analysis of the Expanded Phosphodiesterase Gene Family in Toxoplasma gondii Tachyzoites	13
Antibody (Serology) Tests for COVID-19: a Case Study	13
Gut Microbiota Predict Enterococcus Expansion but Not Vancomycin-Resistant Enterococcus Acquisition	13
An Expanded Gene Catalog of Mouse Gut Metagenomes	13
Quantifying Neutralizing Antibodies in Patients with COVID-19 by a Two-Variable Generalized Additive Model	13
Microbial Diversity and Mercury Methylation Activity in Periphytic Biofilms at a Run-of-River Hydroelectric Dam and Constructed Wetlands	13
Matrix Effects on the Delivery Efficacy of Bifidobacterium animalis subsp. lactis BB-12 on Fecal Microbiota, Gut Transit Time, and Short-Chain Fatty Acids in Healthy You	13
First IncHI2 Plasmid Carrying mcr-9.1 , bla VIM-1 , and Double Copies of bla KP	13
Genome-Wide CRISPR-Cas9 Screen Reveals the Importance of the Heparan Sulfate Pathway and the Conserved Oligomeric Golgi Complex for Synthetic Double-Stranded RNA Uptake and Sindbis Virus Infection	13
Truffle Microbiome Is Driven by Fruit Body Compartmentalization Rather than Soils Conditioned by Different Host Trees	13
A 265-Nanometer High-Power Deep-UV Light-Emitting Diode Rapidly Inactivates SARS-CoV-2 Aerosols	13
Human Papillomavirus 16 (HPV16) E2 Repression of TWIST1 Transcription Is a Potential Mediator of HPV16 Cancer Outcomes	13
Molecular Evolution of Human Coronavirus 229E in Hong Kong and a Fatal COVID-19 Case Involving Coinfection with a Novel Human Coronavirus 229E Genogroup	13
The Human Gut Resistome up to Extreme Longevity	13
Membrane Integrity Contributes to Resistance of Cryptococcus neoformans to the Cell Wall Inhibitor Caspofungin	13
High-Throughput Screen for Inhibitors of the Type IV Pilus Assembly ATPase PilB	13
Gut Microbiome and Serum Metabolome Alterations Associated with Isolated Dystonia	13
Profiling of RNA Viruses in Biting Midges ( Ceratopogonidae ) and Related Diptera from Kenya Using Metagenomics and Metabarcoding Analysis	12
Clinical and Molecular Epidemiology of an Emerging Panton-Valentine Leukocidin-Positive ST5 Methicillin-Resistant Staphylococcus aureus Clone in Northern Australia	12
Fecal Microbiota Transplantation Increases Colonic IL-25 and Dampens Tissue Inflammation in Patients with Recurrent Clostridioides difficile	12
Broadly Reactive H2 Hemagglutinin Vaccines Elicit Cross-Reactive Antibodies in Ferrets Preimmune to Seasonal Influenza A Viruses	12
Light Capture, Skeletal Morphology, and the Biomass of Corals’ Boring Endoliths	12
The higBA- Type Toxin-Antitoxin System in IncC Plasmids Is a Mobilizable Ciprofloxacin-Inducible System	12
Temporal Kinetics of RNAemia and Associated Systemic Cytokines in Hospitalized COVID-19 Patients	12
Waste not, want not: revisiting the analysis that called into question the practice of rarefaction	12
The Majority of Typhoid Toxin-Positive Salmonella Serovars Encode ArtB, an Alternate Binding Subunit	12
Characterization of a 2016-2017 Human Seasonal H3 Influenza A Virus Spillover Now Endemic to U.S. Swine	12
An Osmotic Laxative Renders Mice Susceptible to Prolonged Clostridioides difficile Colonization and Hinders Clearance	12
Dissecting Individual Interactions between Pathogenic and Commensal Bacteria within a Multispecies Gut Microbial Community	12
The pH-Responsive Transcription Factors YlRim101 and Mhy1 Regulate Alkaline pH-Induced Filamentation in the Dimorphic Yeast Yarrowia lipolytica	12
Optogenetic Tools for Control of Public Goods in Saccharomyces cerevisiae	12
Association of Zinc Finger Antiviral Protein Binding to Viral Genomic RNA with Attenuation of Replication of Echovirus 7	12
Case Study of the Response of N 6 -Methyladenine DNA Modification to Environmental Stressors in the Unicellular Eukaryote Tetrahymena thermophila	12
The Putative APSES Transcription Factor RgdA Governs Growth, Development, Toxigenesis, and Virulence in Aspergillus fumigatus	12
Coexistence of Communicating and Noncommunicating Cells in the Filamentous Cyanobacterium Anabaena	12
Clostridioides difficile Phosphoproteomics Shows an Expansion of Phosphorylated Proteins in Stationary Growth Phase	11
CyTOF Profiling of Zika and Dengue Virus-Infected Human Peripheral Blood Mononuclear Cells Identifies Phenotypic Signatures of Monotype Subsets and Upregulation of the Interferon-Inducible Protein CD1	11
An APOBEC3 Mutational Signature in the Genomes of Human-Infecting Orthopoxviruses	11
Mitochondrial Reactive Oxygen Species Enhance Alveolar Macrophage Activity against Aspergillus fumigatus but Are Dispensable for Host Protection	11
High SARS-CoV-2 Seroprevalence in Rural Peru, 2021: a Cross-Sectional Population-Based Study	11
Lipid A Structural Divergence in Rickettsia Pathogens	11
Temporal Changes of Virus-Like Particle Abundance and Metagenomic Comparison of Viral Communities in Cropland and Prairie Soils	11
Molecular Mechanisms of Resistance to Ceftazidime/Avibactam in Clinical Isolates of Enterobacterales and Pseudomonas aeruginosa in Latin American Hospitals	11
A Unique Dual-Readout High-Throughput Screening Assay To Identify Antifungal Compounds with Aspergillus fumigatus	11
Biotransformation of Doxorubicin Promotes Resilience in Simplified Intestinal Microbial Communities	11
Vibrio cholerae Sialidase-Specific Immune Responses Are Associated with Protection against Cholera	11
Mitochondrial Contact Site and Cristae Organization System and F 1 F O -ATP Synthase Crosstalk Is a Fundamental Property of Mitoch	11
Glucose-6-Phosphate Acts as an Extracellular Signal of SagS To Modulate Pseudomonas aeruginosa c-di-GMP Levels, Attachment, and Biofilm Formation	11
Body Mass Index (BMI) Impacts Soil Chemical and Microbial Response to Human Decomposition	11
Development of the intestinal microbiome in cystic fibrosis in early life	11
Deciphering Multidrug-Resistant Acinetobacter baumannii from a Pediatric Cancer Hospital in Egypt	11
Identification of Nasal Gammaproteobacteria with Potent Activity against Staphylococcus aureus: Novel Insights into the “Noncarrier” State	11
Shigella -Specific Immune Profiles Induced after Parenteral Immunization or Oral Challenge with Either Shigella flexneri 2a or Shigella sonnei	11
Genetic Modification of Sodalis Species by DNA Transduction	11
Absence of KpsM (Slr0977) Impairs the Secretion of Extracellular Polymeric Substances (EPS) and Impacts Carbon Fluxes in Synechocystis sp. PCC 6803	11
miR-451a Regulates Neuronal Apoptosis by Modulating 14-3-3ζ-JNK Axis upon Flaviviral Infection	11
Aspergillus fumigatus Strain-Specific Conidia Lung Persistence Causes an Allergic Broncho-Pulmonary Aspergillosis-Like Disease Phenotype	11
Detection of Minority Variants and Mixed Infections in Mycobacterium tuberculosis by Direct Whole-Genome Sequencing on Noncultured Specimens Using a Specific-DNA Capture Strategy	11
Genomic Epidemiology of CC30 Methicillin-Resistant Staphylococcus aureus Strains from Argentina Reveals Four Major Clades with Distinctive Genetic Features	11
Acquisition of Host Cytosolic Protein by Toxoplasma gondii Bradyzoites	11
Tropodithietic Acid, a Multifunctional Antimicrobial, Facilitates Adaption and Colonization of the Producer, Phaeobacter piscinae	11
Development of a Dual-Fluorescent-Reporter System in Clostridioides difficile Reveals a Division of Labor between Virulence and Transmission Gene Expression	11
Mouse-Adapted SARS-CoV-2 MA10 Strain Displays Differential Pulmonary Tropism and Accelerated Viral Replication, Neurodissemination, and Pulmonary Host Responses in K18-hACE2 Mice	11
The Vancomycin Resistance-Associated Regulatory System VraSR Modulates Biofilm Formation of Staphylococcus epidermidis in an ica -Dependent Manner	11
Staphylococcal TSST-1 Association with Eczema Herpeticum in Humans	11
Genetic and Antigenic Characterization of an Expanding H3 Influenza A Virus Clade in U.S. Swine Visualized by Nextstrain	11
Evolutionary and Functional Analysis of Coagulase Positivity among the Staphylococci	11