Structural Dynamics-US

Article	Citations
In crystallo observation of active site dynamics and transient metal ion binding within DNA polymerases	37
Photodiode-based time zero determination for ultrafast electron microscopy	23
Practicing FAIR research with SBGrid	22
Cryo-EM reveals a bi-copper cluster coordinating asymmetric electron transfer in the nitrogenase-like DPOR complex	19
SERCAT II - the next generation	18
Structural characterization of nucleic acid-loaded lipid nanoparticles leveraging a high-throughput small angle X-ray scattering platform	18
MicroED data: from microscope to archive	17
High Resolution Crystal Structure of SARS-CoV-2 Nucleocapsid Protein N-Terminal Domain with Part of Flexible N-Arm in complex with ssDNA	16
Molecular Interplay of VPS34 Inhibition by Novel Drug Targets: A Promising Approach for Tailored Cancer Therapeutics	15
Massive Compression for High Data Rate Macromolecular Crystallography (HDRMX): Impact on Diffraction Data and Subsequent Structural Analysis	13
Allosteric and Cooperative Networks in a Homodimeric Epoxide Hydrolase	13
The long and short of it: Combining X-ray Diffraction, PDF, Neutron PDF and EXAFS to elucidate both long-range and short- range defects in Magnesium Cathode Materials	12
Solving complex structures for Na-ion batteries from powder diffraction	12
Projection to extract the perpendicular component (PEPC) method for extracting kinetics from time-resolved data	11
Complex Crystallography in Modulated BiIr4Se8	11
Automated serial (rotation) electron diffraction for high-throughput structure determination and phase analysis of complex polycrystalline samples	11
Structure and dynamics of supercooled water in the hydration layer of poly(ethylene glycol)	10
Probing optically driven K3C60 thin films with an ultrafast voltmeter	9
State of the Art Instruments for Dynamics and Structure: APS-U Feature Beamlines 9-ID and 8-ID	8
Direct detection in CdTe enables high efficiency for short- and dual-wavelength instruments	8
A Light Source Role: Engaging students in crystallography and beyond	8
Practical considerations for the analysis of time-resolved x-ray data	8
Access and Experiments with MicroED at Yale University for Biomaterials Characterization	8
Square beams for optimal tiling in TEM	7
Peer Review for Beginners and Beyond	7

Long- and short-range structure in layered battery materials and magnetic materials	7
Intermediate states of nucleotide addition by HIV-1 Reverse Transcriptase	7
Pushed to extremes: distinct effects of high temperature vs. pressure on the structure of a phosphatase enzyme	6
XFEL and Electron Crystallography of Organic Compounds	6
Understanding alternative splicing regulation using yeast U1 snRNP	6
Developing Novel Ligands with Binding Affinity Using Machine Learning	6
Structural mechanisms of DNA priming by polymerase α–primase	6
Molecular basis of uphill energy transfer for photosynthesis in the Antarctic alga	5
Structural and Functional Analysis of Sporulation and Germination in Bacterial Endospores	5
Validation of 3D cryoEM single-particle reconstruction correctness and handedness with Ewald's sphere correction	5
The nature of dynamic local order in hybrid lead halide perovskites	5
New and Updated Features in Phenix for Macromolecular Structure Determination	5
How WYPT Aided in the Structure Solution of P1 from Pseudomonas aeruginosa	5
TELSAM-DARPin protein complexes may exhibit partial molecule exclusion when in complex with target proteins	5
Time-resolved cryogenic electron tomography using mix-and-inject microfluidic devices	5
Utilizing SacB Negative Selection in E. coli to Evaluate 10-23 DNAzyme Activity in Cellular Conditions	4
Dynamics retrieval from stochastically weighted incomplete data by low-pass spectral analysis	4
Crystallization dynamics of thin film ternary nitrides	4
A kiloelectron-volt ultrafast electron micro-diffraction apparatus using low emittance semiconductor photocathodes	4
Aminoacyl-tRNA synthetase urzymes optimized by deep learning behave as a quasispecies	4
Cryo-EM reveals the structural and functional role of prothrombin recognition by type-I anti-prothrombin antibody in Antiphospholipid Syndrome	4
Spatiotemporal determination of photoinduced strain in a Weyl semimetal	4
Electron population dynamics in resonant non-linear x-ray absorption in nickel at a free-electron laser	3
Oxos, Diamond Cores, and Oxides: A Look at Co-O	3
Quantitative mapping and visualizing of insulin hormone maturation	3
Quantum-based atomic model refinement becomes reality	3
Non-thermal structural transformation of diamond driven by x-rays	3
CrysFormer: Protein structure determination via Patterson maps, deep learning, and partial structure attention	3
Deep mining of the protein energy landscape	3
A Trp to a Cu binding site	3
Centering students and collaboration in science: humanizing the development of unnatural amino acids as tools to study protein structure	3
Conformational dynamics of adenylate kinase in crystals	3
Time-resolved structural dynamics of the out-of-equilibrium charge density wave phase transition in GdTe3	3
Structure Determination of Difficult to Grow Active Pharmaceutical Ingredients (APIs) using MicroED	3
Advancing Cryo-ET Sample Preparation: Integrated FLM for Cryo-FIB for targeted milling of challenging samples.	3
Using in situ X-ray diffraction to understand metathesis reactions towards ternary nitrides	3
Accelerating structural dynamics through integrated research informatics	3
Electron-counting for MicroED	2
Cryo-EM Structural Characterization of the FeFe-Hydrogenase Maturase Complex	2
Resolving structurally heterogeneous ribosomes in situ with tomoDRGN	2
Non-equilibrium states and interactions in the topological insulator and topological crystalline insulator phases of NaCd4As3	2
Sample Environments for Extreme Biology of Small-Angle Neutron Scattering at Oak Ridge National Laboratory	2
Probing the function and structure of SwrD, a potential flagellar motor power enhancer	2
Blue and red in the protein world: Photoactive yellow protein and phytochromes as revealed by time-resolved crystallography	2
Disentangling the evolution of electrons and holes in photoexcited ZnO nanoparticles	2
From crystallography to alt-ac drug discovery to NIH	2
New Opportunities to Study Metalloprotein Structure and Dynamics	2
Structural basis for inactivation of PRC2 by RNA	2
Statistically elucidated responses from low-signal contrast mechanisms in ultrafast electron microscopy	2
BioSAXS measurement and analysis system in Japanese synchrotron radiation facilities, Photon Factory and SPring-8	2

The Open Plunge Initiative: a modular and quality assessment platform for vitrification technology evaluation	1
The Single Particle CryoEM Structure of Bovine Liver Catalase from Lyophilized Powder	1
Post-COVID Extension of an Online Crystallography School	1
Exploring the Structure/Property Nexus in Perovskite and Pyrochlore Oxides	1
Determining the Mechanism of DJ-1 Using Mix-and-Inject Synchrotron Serial Crystallography	1
Structural characterization of a novel class of antibacterials that target the lipopolysaccharide transporter MsbA in multidrug-resistant Acinetobacter baumannii	1
Crystallographic Errors in Published Structures	1
And now some updates for SDY readers from the Editor….	1
Determining the Enzymatic Mechanism of DJ-1 Using a New Approach to Mix-and-Inject Synchrotron Serial Crystallography	1
Improved temporal resolution in ultrafast electron diffraction measurements through THz compression and time-stamping	1
Progress in Computational Methods for XFEL Single-Particle 3D Nanoscale Imaging	1
A new view of RNA folding using time-resolved WAXS at XFELs	1
From X-ray Synchrotrons to Storage Rings – Revolutionizing Determination of Biological Structure	1
Microsecond time-resolved X-ray scattering by utilizing MHz repetition rate at second-generation XFELs	1
Structure determination by NMR Crystallography, from microcrystalline powders to amorphous molecular solids	1
Structure-Property Relationship in the Kagomé Net Intermetallic Co3Ge2Sb	1
The structural and functional integrities of porcine myocardium are mostly preserved by cryopreservation	1
Development of Methods for the Stabilization of Cryo-EM samples	1
SAXS/SANS as a structural tool to study RNA:RNA complexes	1
High-pressure room-temperature crystallography reveals catalytic lid dynamics even in the absence of ligands	1
The D Gene in CDR H3 Determines a Public Class of Human Antibodies to SARS-CoV-2	1
APEX5 - Bridging the gap between X-ray - and Micro ED data	1
Designing CENTAUR, the SANS/WANS Diffractometer with high flux and inelastic scattering suppression capabilities at the Second Target Station of SNS	1
Cryo-EM Determines the Epitope of a 28 kD Viral Protease in Complex with an Antibody Fragment	1
Accelerating NLRP3 drug discovery by leveraging a multipronged structural biophysics strategy	1
Tunable Energy Synchrotron Diffraction Anomalous Fine Structure (DAFS) Reveals Unprecedented Insights into Copper Compounds	1
Discovery of a new zinc oxide semiconductor: 21R polytype	1
Coherent acoustic phonons in a coupled hexagonal boron nitride–graphite heterostructure	1
In-Situ Structural Studies of Eosinophil Granules	1
Challenges and Approaches in Visualizing 3D Protein Structures in Molecular Animations for All Audiences	1
Helicon: helical reconstruction from a single 2D image	0
Smarter targeting for screening and data collection in Leginon	0
Observation of intermolecular Coulombic decay and shake-up satellites in liquid ammonia	0
Preface to Special Topic: The Advent of Ultrafast X-Ray Absorption Spectroscopy	0
Chemical effects on the dynamics of organic molecules irradiated with high intensity x rays	0
Benchmarking tools to analyze conformational landscapes with cryo-EM	0
Observations on Laue diffraction within synchrotron radiation and neutron macromolecular crystallography research and developments	0
Characterization of the photoelectron circular dichroism of fixed-in-space molecules through an asymmetry of the ionic potential	0
Unveiling hidden wavepacket dynamics in time-resolved x-ray scattering data via singular spectrum analysis	0
Establishing a MicroED workflow at the Hauptman-Woodward Institute	0
Whither the protein landscape?	0
AI in Structural BiologyThe Good, The Bad, and The Ugly	0
3D-ED: The potential and the problems with a step change for small-molecule single crystal structure determination	0
High-repetition-rate ultrafast electron diffraction with direct electron detection	0
Simple techniques to improve particle distribution and data quality for dynamic protein-nucleic acid complexes	0
Getting started with the Gold Standard: NeXus in crystallography	0
Study of trioleoylglycerol two-layer and adiposome cross-section mimicking four-layer systems through atomic-level simulations	0
Quantitative matching of crystal structures to experimental powder diffractograms	0
Protein Data Bank: From Two Epidemics to the Global Pandemic to mRNA Vaccines and Paxlovid	0
Photon to Electron - Journey of a Forever Student!	0
MerlinEM, the universal detector for 4D STEM and microED	0
A periodic-like table of space groups	0
What is the best target protein density for TELSAM fusion crystallization	0
Benchmarking crystal structure refinement: A systematic study on Hirshfeld atom refinement	0
Metabolic Enzymes Moonlighting as RNA Binding Proteins	0
A setup for hard x-ray time-resolved resonant inelastic x-ray scattering at SwissFEL	0
The Upgrade of the Macromolecular Crystallography Beamline X06DA-PXIII at SLS 2.0	0
A new chapter for RCSB Protein Data Bank Molecule of the Month in 2025	0
Ultrafast lattice dynamics and electron–phonon coupling in platinum extracted with a global fitting approach for time-resolved polycrystalline diffraction data	0
Developing operando neutron total scattering for battery research	0
Visualization of Topological Lattice Similarities	0
Using the MATCH procedure in Oxford University’s Crystals for Windows software to search for phase transitions in twins	0
Spatial–temporal characterization of photoemission in a streak-mode dynamic transmission electron microscope	0
Imaging temperature and thickness of thin planar liquid water jets in vacuum	0
Absolute Structure Determination of a Guanitrypmycin Natural Product by Micro Electron Diffraction	0
Neutron Protein Crystallography at Oak Ridge National Laboratory	0
Teaching crystallography in virtual reality environments	0
Relativistic ultrafast electron diffraction at high repetition rates	0
Striving to Meet the Needs of the Structural Biology Community at the National Crystallization Center	0
The C5α-Methyl Substituted Carbapenem NA-1-157 Inhibits the Class A Carbapenemase GES-5	0
Structural insights into GrpEL1-mediated nucleotide and substrate release of mitochondrial Hsp70	0
A Race Against Time: Crystallography in the Outer Limits of the Periodic Table	0
Current and future strategies for end-to-end data analysis at LCLS	0
Current capabilities and new initiatives of the Advanced Crystallographic Program at NSF’s ChemMatCARS	0
Characterization of NMC cathodes and batteries via operando diffraction studies	0
A Structural Perspective on the Temperature-dependent Activity of Enzymes	0
KINNTREX: A Neural Network Unveils Protein Mechanism from Time Resolved X-ray Crystallography	0
Structural Studies of an F-plasmid Protein TraW	0
Porous protein microcrystals for delivery of nucleic acids	0
Appraising protein conformational changes by resampling time-resolved serial x-ray crystallography data	0

Combined Machine Learning and Exhaustive Symmetry Approach for Phase Transition Studies	0
Structural changes in Photosystem II using time-resolved X-ray free-electron (XFEL) crystallography and crystalline molecular dynamics.	0
RF acceleration of ultracold electron bunches	0
Element-specific ultrafast lattice dynamics in FePt nanoparticles	0
Applications of visualization technology in the structural sciences	0
SUBSTRATE BINDING FOR KETOHEXOKINASE-A REVEALS COOPERATIVITY IN THE INDUCED-FIT MECHANISM	0
Structural and Dynamic Regulation of Reactive Intermediates in Cytochrome P450s	0
Integrated edge-to-exascale workflow for real-time steering in neutron scattering experiments	0
Metalloproteins in emerging pathogens	0
Observing ice structure of micron-sized vapor-deposited ice with an x-ray free-electron laser	0
Kilohertz droplet-on-demand serial femtosecond crystallography at the European XFEL station FXE	0
Inhibition of prolyl endopeptidase through a noncatalytic active site residue	0
Defining Grading Tools for Complex Small Molecules to Enable Assessment of Quality and Appropriate Reuse of Data	0
The Cambridge Structural Database and structural dynamics	0
Cryo-EM structural analysis of wild-type and ALS-related mutant SOD1 amyloid filaments	0
Development of a Streamlined Cryo-EM Method to Solve Nucleic Acid Structures	0
Olex2.refine	0
Solution Scattering (SAXS) for identifying small molecule inhibitors	0
Cryo-EM Structures of Group II Intron Ribonucleoprotein Complexes	0
The PILATUS Story: The Rise of Hybrid Photon Counting Detectors for Efficient and Fast X-Ray Diffraction	0
Structural insights into RNA targeting with de novo small molecule	0
Toward the Open Science model: publish your raw diffraction data.	0
High energy electron diffraction instrument with tunable camera length	0
The Berkeley Center for Structural Biology at the Advanced Light Source	0
Quasi-elastic neutron scattering reveals the relationship between the dynamical behavior of phospholipid headgroups and hydration water	0
Leveraging SAXS for Biologics Formulation Development in the Pharmaceutical Industry	0
Accurate quantification of lattice temperature dynamics from ultrafast electron diffraction of single-crystal films using dynamical scattering simulations	0
Real-time Data Analysis with the LCLS-II Data System	0
#IAmRemarkable	0
High conservation doesn't always translate: A comparison of ATAD2 and ATAD2B structure and function	0
Molecular chameleons adaptability in target binding	0
Laser-induced electron diffraction: Imaging of a single gas-phase molecular structure with one of its own electrons	0
Development of Constructs and Crystal Forms of HSP47 to Support Structure-Based Drug Design	0
Resolving polymer flipping in TELSAM-facilitated protein crystals using magneto crystallography	0
Poorly Diffracting Samples: What is Weak Data and What is Noise?	0
Sensitive Detection of Structural Differences within a Statistical Framework for Comparative Crystallography	0
Sub-Atomic Resolution Imaging of Crystals by Electron Diffraction	0
Crystal Vision: A Virtual Reality Game for Learning Materials Crystallography	0
My academic career journey in structural science and engineering	0
Defining and controlling protein allostery and nucleic acid sculpting	0
Sample preparation for routine and advanced structural biology, including serial data collection and microED	0
Mode-selective ballistic pathway to a metastable electronic phase	0
Custom systems powered by MetalJet bringing synchrotron applications to the lab	0
Mapping allosteric rewiring across a family of dynamic tyrosine phosphatases	0
High-Throughput Crystallisation of Organic Molecules on the Nanoscale - Successes, Challenges and Future Directions	0
Is this publishable (please)? Quality in Crystallography	0
Local magnetic correlations in ferrimagnetic semiconductor Mn3Si2Te6	0
Crystallization and structural investigation of HIV-1 Rev Response Element (RRE)	0
Pink and blue materials with olivine solid solutions and pink diopside solid solutions: towards more sustainable pigments	0
Advanced glycation end product (AGE) crosslinking of a bacterial protein: Are AGE-modifications going undetected in our studies?	0
Sub-tomogram averaging of structural proteins from respiratory syncytial virus released from cells grown and infected on grids reveals molecular organization of filamentous virions	0
Porous Coordination Cages: Acceptable levels of structure completion	0
Sharing our excitement for structural science through mentorship	0
Integrated AI/ML and HPC Framework for Multidimensional Neutron Crystallography	0
Synthesis technique and electron beam damage study of nanometer-thin single-crystalline thymine	0
Predicting electrostatic and optoelectronic properties of biomolecules via group polarizability approach	0
Visualization of transient states and molecular motions in the catalytic cycle of the proline catabolic bifunctional enzyme Proline Utilization A from kinetic crystallography and molecular dynamics si	0
ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models	0
Characterization of reconstituted receptor-histidine kinase core signaling complexes	0
Ultrafast-induced coherent acoustic phonons in the two-dimensional magnet CrSBr	0
Gigahertz streaking and compression of low-energy electron pulses	0
Cryo-EM Protein Structure Without Purification	0
Quantum Crystallography combined with Neutron Study: Molecular Insights of Crystal Engineering for Carbon Capture Materials	0
Data retention for high-throughout XFEL chemical crystallography	0
Exploring Validation of PDB Experimental Structures and Computed Structure Models at RCSB.org	0
Instrumentation for Biological SAXS at SSRL BL4-2	0
Enabling Kilohertz Data Acquisition and Analysis for the Swiss Light Source 2.0	0
The 2024 challenges in structural biology summit	0
Wide-angle scattering studies of nucleic acids	0
What can we learn from MD simulations of biomolecular crystals?	0
High resolution powder diffraction at the ESRF	0
Impact of thermal annealing on magnetic properties in nano compositionally complex spinel cobaltite -(Mg0.2Mn0.2Fe0.2Cu0.2Zn0.2)Co2O4	0
Crystal Growth and Crystallography of a Complex Transition Metal Oxide	0
Dueling Robots: Concurrent, Robotic, AI-Driven SAXS and SANS to Solve Industrial Problems	0
Leveraging Advances in Cryo Electron Microscopy to Facilitate Drug Discovery	0
Cryo-EM and Molecular Dynamics Simulations Reveal Hidden Conformational Dynamics Controlling Ammonia Transport in Human Asparagine Synthetase	0
Structural dynamics at surfaces by ultrafast reflection high-energy electron diffraction	0
Simulations of x-ray absorption spectra for CO desorbing from Ru(0001) with transition-potential and time-dependent density functional theory approaches	0
Ultrafast energy-dispersive soft-x-ray diffraction in the water window with a laser-driven source	0
Towards structural determination of fluoride export proteins	0
Understanding the Molecular Mechanism of Redondovirus Rep in Rolling Circle Replication of the Redondoviral Genome	0
Biophysical Characterization of the Pseudomonas aeruginosa BqsR/BqsS Two-Component System	0
High throughput mutagenesis to promote oligomerization to access cryo EM: a case study for HSD17b13	0
The future of advanced automation at the NSLS-II AMX beamline	0
CRAFT (CENTER FOR THE RESEARCH AND ADVANCEMENT IN FRAGMENTS AND MOLECULAR TARGETS) : A BRAZILIAN CENTER FOR DRUG DISCOVERY	0
Diffraction-Guided Natural Product Discovery	0
Speeding up drug discovery with high-quality and high-reliability crystallography-based library screening	0
Using structure and informatics to probe the mechanism of enzymes in the flavin amine oxidase superfamily	0
Automated vitrification with self-wicking grids may limit potential preferred orientation of CRL5-PCMTD1, a putative cullin-RING ligase, during cryoEM sample preparation	0
NoSpherA2 in the Hands of a Synthetic Chemist: The Future is Now	0
Structure of saguaro cactus virus 3′ translational enhancer mimics 5′ cap for eIF4E binding	0
Spin dynamics in elemental Ni and Ni85Co15 thin films probed by high harmonic generated photons around the M2,3 edges	0
Distinguishing isotropic and anisotropic signals for X-ray scattering data using machine learning	0
Predicting protein structure and dynamics with deep learning and solution scattering	0
Unveiling the Inherent Beauty of Crystallography to Undergraduate Students	0