OOIR: Observatory of International Research

Papers

(The TQCC of Neurophotonics is 7. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-08-01 to 2025-08-01.)

Article	Citations
Special Section Guest Editorial: Imaging Neuroimmune, Neuroglial, and Neurovascular Interfaces	101
Taking the lid off ambitions for optical imaging of the human brain: a conversation with Clare Elwell	74
The Ten Commandments of Everyday Leadership	53
Important role of the right hemisphere in post-stroke cognitive impairment: a functional near-infrared spectroscopy study	47
Advances in computer-generated holography for targeted neuronal modulation	44
Computing hemodynamic response functions from concurrent spectral fiber-photometry and fMRI data	42
Observation of cortical state–based learning in infants in a functional near-infrared spectroscopy paradigm	41
Assessment of residual awareness in patients with disorders of consciousness using functional near-infrared spectroscopy–based connectivity: a pilot study	35
Spiral laser scanning photoacoustic microscopy for functional brain imaging in rats	34
Evaluation of cerebral microcirculation in a mouse model of systemic inflammation	32
Early screening model for mild cognitive impairment based on resting-state functional connectivity: a functional near-infrared spectroscopy study	31
Review of cocaine-induced brain vascular and cellular function changes measured in vivo with optical imaging	27
Dynamic infrared imaging of cerebrospinal fluid tracer influx into the brain	24
Investigation of effect of modulation frequency on high-density diffuse optical tomography image quality	23
Portable six-channel laser speckle system for simultaneous measurement of cerebral blood flow and volume with potential applications in characterization of brain injury	22
Site-specific effects of 800- and 850-nm forehead transcranial photobiomodulation on prefrontal bilateral connectivity and unilateral coupling in young adults	22
Shedding light on functional near-infrared spectroscopy and open science practices	22
Förster resonance energy transfer efficiency of the vinculin tension sensor in cultured primary cortical neuronal growth cones	21
Altered functional connectivity after pilocarpine-induced seizures revealed by intrinsic optical signals imaging in awake mice	21
Systematic review of fNIRS studies reveals inconsistent chromophore data reporting practices	21
Special Section Guest Editorial: Frontiers in Neurophotonics	20
Detectability of hemodynamic oscillations in cerebral cortex through functional near-infrared spectroscopy: a simulation study	19
Explainable fNIRS-based pain decoding under pharmacological conditions via deep transfer learning approach	19
Special Section Guest Editorial: Hybrid Photonic/X Neurointerfaces	19
In vivo volumetric analysis of retinal vascular hemodynamics in mice with spatio-temporal optical coherence tomography	19

Imaging the brain in action: a motorized optical rotary joint for wide field fibroscopy in freely moving animals	19
Advances in studying whole mouse brain vasculature using high-resolution 3D light microscopy imaging	19
Zika virus encephalitis causes transient reduction of functional cortical connectivity	16
Implantable photonic nano-modulators open perspectives for advanced optical interfaces with deep brain areas	16
Dual-slope imaging of cerebral hemodynamics with frequency-domain near-infrared spectroscopy	15
Quantitative simulation of near-infrared light treatment for Alzheimer’s disease using patient-individualized optical-parametric phantoms	15
Imaging of post-synaptic membrane trafficking in neuronal dendrites: progress, limitations, and new developments	15
ninjaCap: a fully customizable and 3D printable headgear for functional near-infrared spectroscopy and electroencephalography brain imaging	15
Comprehensive software suite for functional analysis and synaptic input mapping of dendritic spines imaged in vivo	15
Controlling the familywise error rate in widefield optical neuroimaging of functional connectivity in mice	14
Contribution of optical resolution to the spatial precision of two-photon optogenetic photostimulation in vivo	14
Semiautomated analysis of an optical ATP indicator in neurons	14
Acute hypoxia elicits prefrontal oxygenation asymmetry in young adults	14
Unbiased analysis of mouse brain endothelial networks from two- or three-dimensional fluorescence images	13
Chasing cortical behavior: designing multiphoton microscopes for imaging neuronal populations in freely moving rodents	13
Implantable acousto-optic window for monitoring ultrasound-mediated neuromodulation in vivo	12
All-optical observation on activity-dependent nanoscale dynamics of myelinated axons	12
Pulsatile microvascular cerebral blood flow waveforms change with intracranial compliance and age	12
Preictal neuronal and vascular activity precedes the onset of childhood absence seizure: direct current potential shifts and their correlation with hemodynamic activity	12
2023 List of Reviewers	12
Precision of time-resolved near-infrared spectroscopy-based measurements of cerebral oxygenation in preterm infants	12
Reproducibility of infant fNIRS studies: a meta-analytic approach (Erratum)	12
Chronic co-implantation of ultraflexible neural electrodes and a cranial window	12
Introduction to the shared near infrared spectroscopy format	12
Machines, mathematics, and modules: the potential to provide real-time metrics for pain under anesthesia	11
Light, questions, probes: Valentina Emiliani on combining disciplines for neurophotonics	11
Characterizing vascular function in mouse models of Alzheimer’s disease, atherosclerosis, and mixed Alzheimer’s and atherosclerosis	11
Characterization of Mayer-wave oscillations in functional near-infrared spectroscopy using a physiologically informed model of the neural power spectra	10
Erratum: Transcranial optical monitoring for detecting intracranial pressure alterations in children with benign external hydrocephalus: a proof-of-concept study	10
Comparing synthetic refocusing to deconvolution for the extraction of neuronal calcium transients from light fields	10
Using spectral derivatives to remove the influence of hair on optical images of the static absorbing properties of tissue-like turbid media	10
Optical attenuation coefficient decorrelation-based optical coherence tomography angiography for microvascular evaluation of Alzheimer’s disease on mice	10
Diversity is our Strength	9
Ecological functional near-infrared spectroscopy in mobile children: using short separation channels to correct for systemic contamination during naturalistic neuroimaging	9
Behavioral modeling and neuroimaging of impaired risky decision making in patients with chronic musculoskeletal pain	9
Taste for discovery: a conversation with neuroscientist Serge Charpak	9
Consistency of children’s hemodynamic responses during spontaneous speech	9
GRINtrode: a neural implant for simultaneous two-photon imaging and extracellular electrophysiology in freely moving animals	9
Warriors of Science: Ukraine’s Academic Endeavors	9
DDeep3M+: adaptive enhancement powered weakly supervised learning for neuron segmentation	9
Brain imaging across scales: an interview with Prof. Mark Schnitzer	9
Fiber photometry-based investigation of brain function and dysfunction	8
Diffuse correlation spectroscopy: current status and future outlook	8
Wide-field fluorescence navigation system for efficient miniature multiphoton imaging in freely behaving animals	8
Zebrafish brain atlases: a collective effort for a tiny vertebrate brain	8
Deep learning in fNIRS: a review	8
Visible-light optical coherence tomography and its applications	8
How the heterogeneity of the severely injured brain affects hybrid diffuse optical signals: case examples and guidelines	8
Comparison of optical measurements of critical closing pressure acquired before and during induced ventricular arrhythmia in adults	8
Recent advances in bioluminescent probes for neurobiology	8

Continuous blood flow visualization with laser speckle contrast imaging during neurovascular surgery	8
Neurophotonics beyond the surface: unmasking the brain’s complexity exploiting optical scattering	7
Recent advances and challenges in the use of CRISPR/Cas9 genome editing for understanding neuronal cell biology	7
2024 List of Reviewers	7
Computer vision–guided open-source active commutator for neural imaging in freely behaving animals	7
Repeated transcranial photobiomodulation improves working memory of healthy older adults: behavioral outcomes of poststimulation including a three-week follow-up	7
Microprisms enable enhanced throughput and resolution for longitudinal tracking of neuronal ensembles in deep brain structures	7
Neurovascular coupling over cortical brain areas and resting state network connectivity with and without rigidified carotid artery	7
In vivo characterization of cerebrovascular impairment induced by amyloid β peptide overload in glymphatic clearance system using swept-source optical coherence tomography	7
Mid-infrared photoacoustic brain imaging enabled by cascaded gas-filled hollow-core fiber lasers	7
Systemic physiology augmented functional near-infrared spectroscopy: a powerful approach to study the embodied human brain	7
Systemic physiology augmented functional near-infrared spectroscopy hyperscanning: a first evaluation investigating entrainment of spontaneous activity of brain and body physiology between subjects	7
Exploring the impact of pre-anastomosis cerebral microcirculation on cerebral hyperperfusion syndrome in superficial temporal artery-middle cerebral artery bypass surgery of moyamoya disease	7
Foundry-fabricated dual-color nanophotonic neural probes for photostimulation and electrophysiological recording	7
Assaying activity-dependent arteriole and capillary responses in brain slices	7