Crop Journal

Papers
(The median citation count of Crop Journal is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-08-01 to 2025-08-01.)
ArticleCitations
The Magnaporthe oryzae effector Avr-PikD suppresses rice immunity by inhibiting an LSD1-like transcriptional activator214
MePHD1.2 affects the synthesis of cyanogenic glycosides by regulating transcription of MeCYP79D2 in cassava187
Mutations in the WUSCHEL-related homeobox1 gene cause an increased leaflet number in soybean118
QTL mapping for grain number per spikelet in wheat using a high-density genetic map94
Development of mutants with varying flowering times by targeted editing of multiple SVP gene copies in Brassica napus L.84
Unraveling the regulatory network of flower coloration in soybean: Insights into roles of GmMYBA3 and GmMYBR181
A natural allele of TAW1 contributes to high grain number and grain yield in rice72
Constructing the maize inflorescence regulatory network by using efficient tsCUT&Tag assay72
GmNLP7a inhibits soybean nodulation by interacting with GmNIN1a67
The rice OsCBL3-OsCIPK31 module regulates root development via abscisic acid and auxin signaling pathways66
The continuous wavelet projections algorithm: A practical spectral-feature-mining approach for crop detection63
QTL mapping and transcriptome analysis identify candidate genes influencing water–nitrogen interaction in maize57
Sustainable transition for cereal-based agri-food systems in China: Prospective advantages of whole-grain adoption56
Haploids can be induced in knockout mutants of OsPLA1, but not OsDMP3 or OsDMP6, in rice55
Modulation of rice grain shape and appearance by the GS10-encoded long coiled-coil protein54
Artificial intelligence redefines agricultural genetics by unlocking the enigma of genomic complexity51
Single-cell nuclear transcriptomics reveal root tip adaptations to nitrogen scarcity in wheat48
Detection of new candidate genes controlling seed weight by integrating gene coexpression analysis and QTL mapping in Brassica napus L.48
MIR1868 negatively regulates rice cold tolerance at both the seedling and booting stages47
Wheat MADS-box gene TaSEP3-D1 negatively regulates heading date47
Quantifying the effects of stripe rust disease on wheat canopy spectrum based on eliminating non-physiological stresses47
The soybean GmPUB21-interacting protein GmDi19-5 responds to drought and salinity stresses via an ABA-dependent pathway46
Single-cell transcriptome sequencing reveals the mechanism regulating rice plumule development45
A polygalacturonase gene OsPG1 modulates water homeostasis in rice45
Mutation of the PHYTOENE DESATURASE 3 gene causes yellowish-white petals in Brassica napus45
Mapping of powdery mildew resistance genes transferred to common wheat from wild emmer wheat revealed three functional Pm60 haplotypes45
Regulation of tiller angle by gravity-sensing genes in rice43
Chromosome 5P of Agropyron cristatum induces chromosomal translocation by disturbing homologous chromosome pairing in a common wheat background42
Decoding the inconsistency of six cropland maps in China42
Field estimation of maize plant height at jointing stage using an RGB-D camera41
Maize response to nitrogen and phosphorus starter fertilisation in mineral-fertilised or manured systems41
Isolating QTL controlling sugarcane leaf blight resistance using a two-way pseudo-testcross strategy40
Co-overexpression of genes for nitrogen transport, assimilation, and utilization boosts rice grain yield and nitrogen use efficiency39
SsdchA is a novel secretory cellobiohydrolase driving pathogenicity in Sclerotinia sclerotiorum39
Identification of no pollen 1 provides a candidate gene for heterosis utilization in foxtail millet (Setaria italica L.)39
TaIAA10-6D orchestrates processing quality and grain yield by modulating glutenin/gliadin ratio and plant morphogenesis in wheat39
Flowering-time regulation by the circadian clock: From Arabidopsis to crops39
Optimizing maize growth and N dynamics in Northeast China by combining dairy cattle slurry and synthetic fertilizer38
Estimation of spectral responses and chlorophyll based on growth stage effects explored by machine learning methods37
Straw mulch-based no-tillage improves tillering capability of dryland wheat by reducing asymmetric competition between main stem and tillers37
OsADR3 increases drought stress tolerance by inducing antioxidant defense mechanisms and regulating OsGPX1 in rice (Oryza sativa L.)37
Editorial Board36
Genome-wide prediction for hybrids between parents with distinguished difference on exotic introgressions in Brassica napus36
Past and recent advances in sugarcane cytogenetics35
Towards cultivar-oriented gene discovery for better crops35
Vitamin and zeatin treatments promote colchicine-induced haploid chromosome doubling in maize35
Reduction of uncertainties in rice yield response to elevated CO2 by experiment-model integration: A case study in East China35
GmSTF accumulation mediated by DELLA protein GmRGAs contributes to coordinating light and gibberellin signaling to reduce plant height in soybean35
ZmMs33 promotes anther elongation via modulating cell elongation regulators, metabolic homeostasis, and cell wall remodeling in maize35
Editorial Board35
A single-nucleus transcriptomic atlas of peanut seedlings unveils gene regulatory dynamics governing hypocotyl development34
BEAR1, a bHLH transcription factor, controls seedling growth by regulating gibberellins biosynthesis in rice34
Integrated multi-omics reveals contrasting epigenetic patterns in leaf and root morphogenesis in Aegilops speltoides33
Natural and artificial evolution of acetolactate synthase for crop breeding33
Barley FASCIATED EAR genes determine inflorescence meristem size and yield traits33
Comparative DNA-methylome and transcriptome analysis reveals heterosis- and polyploidy-associated epigenetic changes in rice33
ABA-activated subclass III SnRK2s control kernel maturation in maize33
Calmodulins and calmodulin-like proteins-mediated plant organellar calcium signaling networks under abiotic stress32
Enemies at peace: Recent progress in Agrobacterium-mediated cereal transformation32
Fine-mapping and candidate gene identification for QPtn.sau-4B showing potential in increasing productive tiller number and yield in wheat32
The regulatory network behind maize seed germination: Effects of temperature, water, phytohormones, and nutrients32
Genetic gains with genomic versus phenotypic selection for drought and waterlogging tolerance in tropical maize (Zea mays L.)31
The prevalence of deleterious mutations during the domestication and improvement of soybean31
Rice transcription factors OsLBD37/38/39 regulate nitrate uptake by repressing OsNRT2.1/2.2/2.3 under high-nitrogen conditions31
Fine mapping and validation of a stable QTL for thousand-kernel weight in wheat (Triticum aestivum L.)31
J-family genes redundantly regulate flowering time and increase yield in soybean30
Cloning of a new allele of ZmAMP1 and evaluation of its breeding value in hybrid maize29
Profiling seed soluble sugar compositions in 1164 Chinese soybean accessions from major growing ecoregions29
Long-term straw incorporation increases rice yield stability under high fertilization level conditions in the rice–wheat system29
Calcium/calmodulin modulates salt responses by binding a novel interacting protein SAMS1 in peanut (Arachis hypogaea L.)28
Genetic dissection and validation of a new dominant QTL associated with chlorophyll content and its regulatory networks analysis in soybean28
A high-resolution 20K SNP array for comprehensive genotyping and genetic mapping in Nicotiana tabacum L.28
Identification of a locus associated with genic male sterility in maize via EMS mutagenesis and bulked-segregant RNA-seq28
OsNPF3.1, a member of the NRT1/PTR family, increases nitrogen use efficiency and biomass production in rice28
Haplotype variation and KASP markers for SiPSY1 – A key gene controlling yellow kernel pigmentation in foxtail millet28
Development of a target capture sequencing SNP genotyping platform for genetic analysis and genomic breeding in rapeseed27
Assembly and phylogenomic analysis of cotton mitochondrial genomes provide insights into the history of cotton evolution27
A gain-of-function mutation of OsMAPK6 leads to long grain in rice27
The cotton mitochondrial chimeric gene orf610a causes male sterility by disturbing the dynamic balance of ATP synthesis and ROS burst26
Bn.YCO affects chloroplast development in Brassica napus L.26
Elite, transformable haploid inducers in maize26
Effects of dense planting patterns on photosynthetic traits of different vertical layers and yield of wheat under different nitrogen rates26
Chloride-dependent plasma membrane hyperpolarization confers superior salinity tissue tolerance in wild rice Oryza coarctata26
Genomic prediction of yield performance among single-cross maize hybrids using a partial diallel cross design26
Molecular cytogenetic analyses of two new wheat-rye 6RL translocation lines with resistance to wheat powdery mildew25
Development and identification of wheat–Psathyrostachys huashanica 7NsS small segment translocation lines with early heading date gene Ehd-7Ns25
Dynamic patterns of the translatome in a hybrid triplet show translational fractionation of the maize subgenomes25
TaMADS2-3D, a MADS transcription factor gene, regulates phosphate starvation responses in plants25
Efficient genetic transformation and gene editing in Erigeron breviscapus using developmental regulators25
Remote sensing of quality traits in cereal and arable production systems: A review25
Ectopic expression of OsNF-YA8, an endosperm-specific nuclear factor Y transcription-factor gene, causes vegetative and reproductive development defects in rice25
Editorial Board25
Rice Glucose 6-Phosphate/Phosphate Translocator 1 is required for tapetum function and pollen development24
Host-induced gene silencing of multiple pathogenic factors of Sclerotinia sclerotiorum confers resistance to Sclerotinia rot in Brassica napus24
Leveraging the potential of big genomic and phenotypic data for genome-wide association mapping in wheat24
Editorial Board24
Research progress on the divergence and genetic basis of agronomic traits in xian and geng rice24
Synergistic effects of planting density and nitrogen fertilization on chlorophyll degradation and leaf senescence after silking in maize24
Camellia sinensis CsMYB4a participates in regulation of stamen growth by interaction with auxin signaling transduction repressor CsAUX/IAA424
Inheritance of marsh spot disease resistance in cranberry common bean (Phaseolus vulgaris L.)23
Fine mapping and candidate gene analysis of qHD1b, a QTL that promotes flowering in common wild rice (Oryza rufipogon) by up-regulating Ehd123
The plasmodesmata-associated β-1,3-glucanase gene GhPdBG regulates fiber development in cotton23
OsSPL10 controls trichome development by interacting with OsWOX3B at both transcription and protein levels in rice (Oryza sativa L.)23
Influence of seven levels of chemical/biostimulator protection on amino acid profile and yield traits in wheat23
Effects of water deficit and high N fertilization on wheat storage protein synthesis, gluten secondary structure, and breadmaking quality23
Development of diagnostic markers for a wheat leaf rust resistance gene Lr42 using RNA-sequencing23
Pm67, a new powdery mildew resistance gene transferred from Dasypyrum villosum chromosome 1V to common wheat (Triticum aestivum L.)23
Editorial Board23
A 9.5-kb deletion in the 1st intron of OsMADS51 enhances temperature sensitivity in rice23
Rice AGL1 determines grain size and sterile lemma identity23
Genome-wide analysis of soybean DnaJA-family genes and functional characterization of GmDnaJA6 responses to saline and alkaline stress23
Transcription factor BnaA1.WRKY53 is involved in regulation of auxin-induced leaf curling under boron deficiency in Brassica napus23
Editorial Board23
Development of a wheat material with improved bread-making quality by overexpressing HMW-GS 1Sx2.3* from Aegilops longissima22
Integrated linkage mapping and genome-wide association study to dissect the genetic basis of zinc deficiency tolerance in maize at seedling stage22
Editorial Board22
Changes in the epigenome and transcriptome of rice in response to Magnaporthe oryzae infection22
The transcriptional landscape of the developmental switch from regular pollen maturation towards microspore-derived plant regeneration in barley22
Editorial Board22
Genetic basis of the mucilage secretion ability associated with nitrogen fixation from aerial roots of maize inbred lines under low nitrogen conditions22
The BEL1-like transcription factor GhBLH5-A05 participates in cotton response to drought stress22
Natural variation of ClCCT promoter promotes flowering and dwarfing in adlay (Coix lacryma-jobi L.)21
Improving maize growth and development simulation by integrating temperature compensatory effect under plastic film mulching into the AquaCrop model21
Two types of cinnamoyl-CoA reductase function divergently in accumulation of lignins, flavonoids and glucosinolates and enhance lodging resistance in Brassica napus21
Genetic dissection of yield-related traits in response to drought stress in common bean21
Establishment of a novel engineering breeding technology for cytoplasmic male sterility21
Seedling defoliation of cereal crops increases peanut growth and yield in an intercropping system21
PDIL2-3 encoding a protein disulfide isomerase-like enzyme is essential for grain yield and appearance quality in rice (Oryza sativa L.)21
Genome-wide investigation of defensin genes in peanut (Arachis hypogaea L.) reveals AhDef2.2 conferring resistance to bacterial wilt21
Arginine promotes seed energy metabolism, increasing wheat seed germination at low temperature21
Synthetic metabolic engineering of functional crops: Boosting nutrition and human health21
Origin of the presence/absence variation of the LTIA1/LTIA2 mini-ribonuclease III genes required for low-temperature growth in rice20
R3-MYB proteins OsTCL1 and OsTCL2 modulate seed germination via dual pathways in rice20
Plant aquaporins: Their roles beyond water transport20
CRISPR–Cas9-mediated promoter editing of FERONIA-Like receptor 13 increases plant growth and disease resistance in rice20
qLTS5/OsALA4 encodes a P4-ATPase that positively regulates cold tolerance in rice seedlings20
Glucosylceramides containing very long-acyl-chain fatty acid are critical for cotton fiber elongation by influencing brassinosteroid synthesis and signaling20
Genes controlling grain chalkiness in rice20
The dual role of casein kinase 1, DTG1, in regulating tillering and grain size in rice19
DCL2-dependent regulation of sRNA biogenesis and translocation in soybean19
A differentially methylated region of the ZmCCT10 promoter affects flowering time in hybrid maize19
Fiber-specific increase of carotenoid content promotes cotton fiber elongation by increasing abscisic acid and ethylene biosynthesis19
Micro-ridge-furrow planting increases rapeseed yield and resource utilization efficiency through optimizing field microenvironment and light-nitrogen matching19
Integrated genomic and transcriptomic analysis reveals genes associated with plant height of foxtail millet19
A new strategy of molecular breeding for optimal heading date and grain yield in rice by modulating elite allelic combinations of Ghd7, Hd3a, RFT1 and Gn1a19
Rice melatonin deficiency causes premature leaf senescence via DNA methylation regulation19
Contrasting patterns of accumulation, partitioning, and remobilization of biomass and phosphorus in a maize cultivar19
OsDA1 positively regulates grain width in rice19
Corrigendum to “GmTOC1b negatively regulates resistance to Soybean mosaic virus”. [Crop J. 11 (2023) 1762–1773]19
Copy number variation of B1 controls awn length in wheat19
Comparative transcriptome analyses reveal that the MsNST1 gene affects lignin synthesis in alfalfa (Medicago sativa L.)19
RNAi technologies for insect control in crop protection19
Identification of candidate genes for aphid resistance in upland cotton by QTL mapping and expression analysis18
A growth-regulating factor 7 (GRF7)-mediated gene regulatory network promotes leaf growth and expansion in sugarcane18
Estimating wheat spike-leaf composite indicator (SLI) dynamics by coupling spectral indices and machine learning18
Development of a high-density SSR genetic linkage map in sweet potato18
Omics big data for crop improvement: Opportunities and challenges18
DaMYB75 and DaMYB56 antagonistically regulate anthocyanin biosynthesis by binding to the DaANS promoter in Dioscorea alata18
Low N apparent surplus with higher rice yield under long-term fertilizer postponing in the rice–wheat cropping system18
Editorial Board18
Three co-located resistance genes confer resistance to leaf rust and stripe rust in wheat variety Borlaug 10018
A novel genomic prediction method combining randomized Haseman-Elston regression with a modified algorithm for Proven and Young for large genomic data18
Functional characterization of the effects of gene TaPLT8 on iron distribution in different wheat organs18
Advances in deciphering salt tolerance mechanism in maize18
CNGC20 plays dual roles in regulating plant growth and immunity in Brassica napus18
Phosphorylation regulation of nitrogen, phosphorus, and potassium uptake systems in plants18
Genetic dissection of drought resistance for trait improvement in crops18
Phytoene synthase gene GbDYA modulates carotenoids accumulation and confers yellow anther and pollen antioxidant activity in cotton18
The pentatricopeptide repeat protein AL5 modulates early chloroplast development in rice17
Fine mapping of a major QTL qHYF_B06 for peanut yield17
Multi-omics analysis reveals the pivotal role of phytohormone homeostasis in regulating maize grain water content17
Time-resolved multiomics analysis of the genetic regulation of maize kernel moisture17
Evapotranspiration partitioning and crop water productivity under varying planting densities of maize in north China17
New transcriptomic insights in two RNAi wheat lines with the gliadins strongly down-regulated by two endosperm specific promoters17
Key genes and mechanisms underlying natural variation of silique length in oilseed rape (Brassica napus L.) germplasm17
Poor development of spike differentiation triggered by lower photosynthesis and carbon partitioning reduces summer maize yield after waterlogging17
Development of a single transcript CRISPR/Cas9 toolkit for efficient genome editing in autotetraploid alfalfa17
TaARPC5 is required for wheat defense signaling in response to infection by the stripe rust fungus17
Disruption of LEAF LESION MIMIC 4 affects ABA synthesis and ROS accumulation in rice17
Cob color, an indicator of grain dehydration and agronomic traits in maize hybrids17
Rice3K56 is a high-quality SNP array for genome-based genetic studies and breeding in rice (Oryza sativa L.)17
ABA biosynthesis rather than ABA catabolism is induced by low temperature and inhibits seed germination by activating OsTPP316
A rare natural variation in TaFT-D2 underlies QTss.cas-3D associated with increased total spikelet number per spike in wheat16
Dynamic and adaptive membrane lipid remodeling in leaves of sorghum under salt stress16
Integration of meta-QTL discovery with omics: Towards a molecular breeding platform for improving wheat resistance to Fusarium head blight16
The rice miR171b–SCL6-IIs module controls blast resistance, grain yield, and flowering16
Recent omics progress in nanobiotechnology for plant abiotic stress tolerance improvement16
Genetic improvement of legume roots for adaption to acid soils16
LociScan, a tool for screening genetic marker combinations for plant variety discrimination16
Production, characterization, and potential utility of a newly synthesized allohexaploid wheat Triticum kiharae16
Nitrogen sources and sinks – Understanding the fate of nitrogen fertiliser when applied at various times and quantifying internally remobilised nitrogen in cotton16
CRISPR/Cas9-engineered mutation to identify the roles of phytochromes in regulating photomorphogenesis and flowering time in soybean16
Mechanisms of autophagy function and regulation in plant growth, development, and response to abiotic stress16
Male sterility in crops: Application of human intelligence to natural variation16
Development of plant cytosine base editors with the Cas12a system16
Characterization of adult plant leaf rust resistance loci in an international wheat collection using a re-sequencing genotyping system16
The ABA synthesis enzyme allele OsNCED2 promotes dryland adaptation in upland rice16
Increasing Fusarium verticillioides resistance in maize by genomics-assisted breeding: Methods, progress, and prospects16
Exploiting phKL-mediated homoeologous recombinants to map stripe rust resistance gene YrAev from Aegilops variabilis15
Filtering for SNPs with high selective constraint augments mid-parent heterosis predictions in wheat (Triticum aestivum L.)15
Chalcone isomerase gene (OsCHI3) increases rice drought tolerance by scavenging ROS via flavonoid and ABA metabolic pathways15
Interplay of light and nitrogen for plant growth and development15
High-throughput phenotyping of plant leaf morphological, physiological, and biochemical traits on multiple scales using optical sensing15
Editorial Board15
Late spring cold reduces grain number at various spike positions by regulating spike growth and assimilate distribution in winter wheat15
Rice ONAC005-OsMADS50-OsMADS56 interaction downregulates OsLFL1 in promoting long-day-dependent flowering15
Functional conservation and divergence of miR156 and miR529 during rice development15
Differing responses of root morphology and physiology to nitrogen application rates and their relationships with grain yield in rice15
Effects of nitrogen fertilizer on protein synthesis, accumulation, and physicochemical properties in common buckwheat15
Dissection of environmental and physiological effects on the temperature difference between superior and inferior spikelets within a rice panicle15
Detecting winter canola (Brassica napus) phenological stages using an improved shape-model method based on time-series UAV spectral data15
Genetic architecture of embryo size and related traits in maize14
QTG-LGBM: A method of prioritizing causal genes in quantitative trait loci in maize14
Identification of new cotton fiber-quality QTL by multiple genomic analyses and development of markers for genomic breeding14
The R2R3-MYB transcription factor GaPC controls petal coloration in cotton14
Genome-wide association mapping and genomic prediction of stalk rot in two mid-altitude tropical maize populations14
Far-red light: A regulator of plant morphology and photosynthetic capacity14
Introgression of chromosome 6PL terminal segment from Agropyron cristatum to increase both grain number and grain weight in wheat14
Multiple omics datasets reveal significant physical and physiological dormancy in alfalfa hard seeds identified by multispectral imaging analysis14
Increased sugar content impairs pollen fertility and reduces seed-setting in high-photosynthetic-efficiency rice14
PlantGaussian: Exploring 3D Gaussian splatting for cross-time, cross-scene, and realistic 3D plant visualization and beyond13
MORF1 regulates the editing of orf224 transcript to modulate fertility in the polima cytoplasmic male sterility system of Brassica napus L.13
Characterization and distribution of novel alleles of the vernalization gene Vrn-A1 in Chinese wheat (Triticum aestivum L.) cultivars13
BnbHLH92a negatively regulates anthocyanin and proanthocyanidin biosynthesis in Brassica napus13
Advances in the functional study of glutamine synthetase in plant abiotic stress tolerance response13
Fine mapping of two recessive genes TaFLA1 and TaSPL8 controlling flag leaf angle in bread wheat13
Selenium–nitrogen-co-doped carbon dots increase rice seedling growth and salt resistance13
Revisiting the role of delta-1-pyrroline-5-carboxylate synthetase in drought-tolerant crop breeding13
Genetic architecture of quantitative trait loci (QTL) for FHB resistance and agronomic traits in a hard winter wheat population13
In silico curation of QTL-rich clusters and candidate gene identification for plant height of bread wheat13
Genome-wide recombination variation in biparental segregating and reciprocal backcross populations provides information for introgression breeding in Brassica napus13
Development and identification of two novel wheat-rye 6R derivative lines with adult-plant resistance to powdery mildew and high-yielding potential13
Harnessing metabolomics for enhanced crop drought tolerance13
SPM-IS: An auto-algorithm to acquire a mature soybean phenotype based on instance segmentation13
Multi-environment BSA-seq using large F3 populations is able to achieve reliable QTL mapping with high power and resolution: An experimental demonstration in rice13
BnaC03.BIN2 regulates plant height by affecting the main inflorescence length and first effective branch height in Brassica napus L.13
Safener-mediated increase in yield components of common buckwheat13
Genetic analysis of GEFs and GDIs in rice reveals the roles of OsGEF5, OsGDI1, and OsGEF3 in the regulation of grain size and plant height13
Multiplex CRISPR/Cas9-mediated knockout of soybean LNK2 advances flowering time13
High-throughput phenotyping discovers new stable loci controlling senescence rate in bread wheat13
Ethylene accelerates maize leaf senescence in response to nitrogen deficiency by regulating chlorophyll metabolism and autophagy13
How to select favorable and promising alleles and genotypes for breeding: A case study of rice blast resistance genes in Southern and Northeastern China13
One-time application of controlled-release blended fertilizer increases rice yield and nitrogen utilization by optimizing root morphological trait distribution and nitrogen uptake12
Fine-mapping and characterisation of genes on barley (Hordeum vulgare) chromosome 2H for salinity stress tolerance during germination12
GhIQD10 interacts with GhCaM7 to control cotton fiber elongation via calcium signaling12
Co-planted barnyardgrass reduces rice yield by inhibiting plant above- and belowground-growth during post-heading stages12
Effects of increasing panicle-stage N on yield and N use efficiency of indica rice and its relationship with soil fertility12
Comparative microRNA profiling reveals microRNAs involved in rice resistant response to bacterial blight12
OsMYB84, a transcriptional regulator of OsCOPT2 and OsHMA5, modulates copper uptake and transport and yield production in rice12
Pyramiding of multiple genes generates rapeseed introgression lines with clubroot and herbicide resistance, high oleic acid content, and early maturity12
0.074388980865479