Stem Cell Reports

Papers
(The TQCC of Stem Cell Reports is 14. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-06-01 to 2026-06-01.)
ArticleCitations
MSCohi-O lenses for long-term retention of mesenchymal stem cells on ocular surface as a therapeutic approach for chronic ocular graft-versus-host disease109
Stem cells in your YouTube feed: The complex landscape and unexpected mediators of online information109
USP7 inactivation suppresses APC-mutant intestinal hyperproliferation and tumor development101
Familial Alzheimer’s disease-associated PSEN1 mutations affect neurodevelopment through increased Notch signaling87
Dissecting the impact of differentiation stage, replicative history, and cell type composition on epigenetic clocks66
Human iPSC-Derived Hippocampal Spheroids: An Innovative Tool for Stratifying Alzheimer Disease Patient-Specific Cellular Phenotypes and Developing Therapies64
Ribosomal proteins regulate 2-cell-stage transcriptome in mouse embryonic stem cells61
Pen-2 regulates glial homeostasis by coordinating self-renewal and transdifferentiation programs in oligodendrocyte precursor cells60
Therapeutic reactivation of hippocampal progenitors reverse cognition decline in mice with progressive brain demyelination53
Diversity of cortical progenitors directs neuronal layer formation and regional glial patterning50
Hsp70-Bim interaction mediated mitophagy as a potential therapeutic target for CML stem cells50
Effect of Notch1 signaling on muscle engraftment and maturation from pluripotent stem cells50
A versatile in vivo platform for reversible control of transgene expression in adult tissues49
Functionally redundant roles of ID family proteins in spermatogonial stem cells48
Single-cell characterization of neovascularization using hiPSC-derived endothelial cells in a 3D microenvironment48
Discovery of kidney disease targets using multimodal human podocyte injury models47
Single-cell approaches define two groups of mammalian oligodendrocyte precursor cells and their evolution over developmental time47
Anesthetic-induced neurodevelopmental changes with region-specific responses to propofol in forebrain organoids46
Bone morphogenetic protein 4 induces hematopoietic stem cell development from murine hemogenic endothelial cells in culture44
Connie Eaves (1944–2024)44
Gains of 20q11.21 in human pluripotent stem cells: Insights from cancer research43
In and out: Benchmarking in vitro, in vivo, ex vivo, and xenografting approaches for an integrative brain disease modeling pipeline43
Differentiation success of reprogrammed cells is heterogeneous in vivo and modulated by somatic cell identity memory41
Stabilization of cell-cell adhesions prevents symmetry breaking and locks in pluripotency in 3D gastruloids41
Discovery of NANOG enhancers and their essential roles in self-renewal and differentiation in human embryonic stem cells39
Complex haploinsufficiency in pluripotent cells yields somatic cells with DNA methylation abnormalities and pluripotency induction defects39
A novel paradigm for single-cell annotation in stem cell research39
Plasticity of ocular surface epithelia: Using a murine model of limbal stem cell deficiency to delineate metaplasia and transdifferentiation39
Pluripotent stem cell lines available for use in clinical applications: A comprehensive overview38
DOT1L regulates lung developmental epithelial cell fate and adult alveolar stem cell differentiation after acute injury37
Human iPSC-derived neural progenitor cells rescue motor function and brain pathology in symptomatic Canavan disease mice37
Human spinal GABA neurons survive and mature in the injured nonhuman primate spinal cord37
Single-cell transcriptomics reveals correct developmental dynamics and high-quality midbrain cell types by improved hESC differentiation37
H1FOO-DD promotes efficiency and uniformity in reprogramming to naive pluripotency37
Microbiota from young mice restore the function of aged ISCs36
Glutamine boosts intestinal stem cell-mediated small intestinal epithelial development during early weaning: Involvement of WNT signaling35
Lessons learnt, and still to learn, in first in human stem cell trials35
What does “appropriate scientific justification” mean for the review of human pluripotent stem cell, embryo, and related research?35
Neutrophils as regulators of macrophage-induced inflammation in a setting of allogeneic bone marrow transplantation35
Benchmarking and optimizing Perturb-seq in differentiating human pluripotent stem cells34
Searching for information about stem cells online in an age of artificial intelligence: How should the stem cell community respond?34
Extracellular-vesicle-mediated transfer of let-7b/7c promotes the proliferation of transition-state spermatogonia in neonatal mouse testis33
Mechanical force-promoted osteoclastic differentiation via periodontal ligament stem cell exosomal protein ANXA333
Upregulation of β-catenin due to loss of miR-139 contributes to motor neuron death in amyotrophic lateral sclerosis33
Public perceptions and expectations: Disentangling the hope and hype of organoid research32
Generation of highly pure pluripotent stem cell-derived myogenic progenitor cells and myotubes32
Human fetal tissue is critical for biomedical research31
Ependymal and neural stem cells are close relatives31
MEF2C/p300-mediated epigenetic remodeling promotes the maturation of induced cardiomyocytes30
Medium acidosis drives cardiac differentiation during mesendoderm cell fate specification from human pluripotent stem cells30
Messenger RNA delivery into Sertoli cells restores fertility to congenitally infertile male mice30
Depletion of WFS1 compromises mitochondrial function in hiPSC-derived neuronal models of Wolfram syndrome29
BRD9-containing non-canonical BAF complex maintains somatic cell transcriptome and acts as a barrier to human reprogramming29
The role of m6A RNA methylation in the maintenance of X chromosome inactivation and X-to-autosome dosage compensation in early embryonic lineages29
Selective Cav1.3 inhibition promotes survival of transplanted dopaminergic neurons via the CaMKII-p65-p53 pathway29
A humanized engineered heart tissue platform for cardiotoxicity assessment29
Gene reactivation upon erosion of X chromosome inactivation in female hiPSCs is predictable yet variable and persists through differentiation29
Aged human serum induces vascular changes in an isogenic co-culture venule model29
UHRF1 interacts with snRNAs and regulates alternative splicing in mouse spermatogonial stem cells29
CD49b identifies functionally and epigenetically distinct subsets of lineage-biased hematopoietic stem cells28
Atypical cell cycle regulation over neural stem cell expansion28
Astrocytes modulate neurodegenerative phenotypes associated with glaucoma in OPTN(E50K) human stem cell-derived retinal ganglion cells28
Low fucosylation defines the glycocalyx of progenitor cells and melanocytes in the human limbal stem cell niche28
Inhibition of N-myristoyltransferase in pluripotent stem cells promotes the naive state in mice and elicits trophectoderm and primitive endoderm markers in humans27
DeePhys: A machine learning–assisted platform for electrophysiological phenotyping of human neuronal networks27
Non-canonical roles of CFH in retinal pigment epithelial cells revealed by dysfunctional rare CFH variants27
Parallel use of human stem cell lung and heart models provide insights for SARS-CoV-2 treatment27
Leveraging CRISPR activation for rapid assessment of gene editing products in human pluripotent stem cells27
What we thought we knew about TNF—And what we now must re-learn26
Transplantation of human pluripotent stem cell-derived retinal sheet in a primate model of macular hole26
Molecular profiling of stem cell-derived retinal pigment epithelial cell differentiation established for clinical translation26
Metabolic remodeling in hiPSC-derived myofibers carrying the m.3243A>G mutation26
A single cell-based computational platform to identify chemical compounds targeting desired sets of transcription factors for cellular conversion26
Granulin loss of function in human mature brain organoids implicates astrocytes in TDP-43 pathology26
Patient-specific and gene-corrected induced pluripotent stem cell-derived endothelial cells elucidate single-cell phenotype of pulmonary veno-occlusive disease25
Histone methyltransferase Setd8 preserves chromatin accessibility to safeguard retinal progenitor cell identity during development25
Characterizing hypoxia-orchestrated post-stroke changes in oligodendrocyte precursor cells for optimized cell therapy25
Modeling in vivo induction of gastric insulin-secreting cells using transplanted human stomach organoids24
Critical considerations for public engagement in stem cell-related research24
New legal category of ‘advanced regenerative medicine treatment’ in Korea’s amended regenerative medicine law: comparative lessons from Japan24
Interspecies chimerism with human embryonic stem cells generates functional human dopamine neurons at low efficiency24
Toward standardized iPSC testing: Insights from a multi-year international Quality Assessment Round24
The trophectoderm acts as a niche for the inner cell mass through C/EBPα-regulated IL-6 signaling23
Modeling sex differences in humans using isogenic induced pluripotent stem cells23
AAV-mediated gene augmentation therapy of CRB1 patient-derived retinal organoids restores the histological and transcriptional retinal phenotype23
Mowat-Wilson syndrome factor ZEB2 controls early formation of human neural crest through BMP signaling modulation23
Ebola virus infection induces a delayed type I IFN response in bystander cells and the shutdown of key liver genes in human iPSC-derived hepatocytes23
Taking the leap toward human-specific nonanimal methodologies: The need for harmonizing global policies for microphysiological systems22
Fractalkine enhances oligodendrocyte regeneration and remyelination in a demyelination mouse model22
Aggregation of cryopreserved mid-hindgut endoderm for more reliable and reproducible hPSC-derived small intestinal organoid generation22
Titin-truncating variants in hiPSC cardiomyocytes induce pathogenic proteinopathy and sarcomere defects with preserved core contractile machinery22
Elimination of tumorigenic pluripotent stem cells from their differentiated cell therapy products: An important step toward ensuring safe cell therapy22
Derivation of functional trophoblast stem cells from primed human pluripotent stem cells22
Involvement of LIN28A in Wnt-dependent regulation of hippocampal neurogenesis in the aging brain22
Prosaposin maintains adult neural stem cells in a state associated with deep quiescence22
Generation of canine induced pluripotent stem cells under feeder-free conditions using Sendai virus vector encoding six canine reprogramming factors22
Induction of astrocyte reactivity promotes neurodegeneration in human pluripotent stem cell models21
Small-molecule inhibitor cocktail promotes the proliferation of pre-existing liver progenitor cells21
Fibroblast fate determination during cardiac reprogramming by remodeling of actin filaments21
A year of engagement and growth: ISSCR’s year-end message from the president 2022–202321
Toti: An integrated multi-omics database to decipher the epigenetic regulation of gene expression in totipotent stem cells21
The Wnt-dependent master regulator NKX1-2 controls mouse pre-implantation development21
Ribosome biogenesis controls cranial suture MSC fate via the complement pathway in mouse and human iPSC models21
Exit from naive pluripotency proceeds with variable latency but without asymmetric division to generate population heterogeneity20
Lineage Tracing Reveals the Bipotency of SOX9+ Hepatocytes during Liver Regeneration20
Micro-patterned culture of iPSC-derived alveolar and airway cells distinguishes SARS-CoV-2 variants20
MIXL1 activation in endoderm differentiation of human induced pluripotent stem cells20
Dual inhibition of MAPK and PI3K/AKT pathways enhances maturation of human iPSC-derived cardiomyocytes20
Human primed and naïve PSCs are both able to differentiate into trophoblast stem cells19
Businesses marketing purported stem cell treatments and exosome therapies for COVID-19: An analysis of direct-to-consumer online advertising claims19
Deep-supercooling preservation of stem cell spheroids for chondral defect repairment19
Identification of glioblastoma stem cell-associated lncRNAs using single-cell RNA sequencing datasets19
Reconstituted ovaries self-assemble without an ovarian surface epithelium19
RBFOX2-dependent alternative splicing of Numb regulates Notch signaling during muscle stem cell activation19
The novel tRF-23 promotes osteogenic differentiation of hBMSCs and protects against bone loss in ovariectomized mice19
Embryonic stem cell ERK, AKT, plus STAT3 response dynamics combinatorics are heterogeneous but NANOG state independent19
Scalable generation of sensory neurons from human pluripotent stem cells19
Aberrant nucleosome organization in mouse SCNT embryos revealed by ULI-MNase-seq19
Perinuclear mitochondrial clustering for mesenchymal-to-epithelial transition in pluripotency induction19
The global downregulation of protein synthesis observed during hepatogenic maturation is associated with a decrease in TOP mRNA translation19
Human CRX regulates photoreceptor cells development via bidirectional transcriptional control in retinal organoids18
ER stress and lipid imbalance drive diabetic embryonic cardiomyopathy in an organoid model of human heart development18
Generating high-quality porcine iPSCs with the new medium cocktail LACID18
Cell-autonomous and non-cell-autonomous roles of NKCC1 in regulating neural stem cell quiescence in the hippocampal dentate gyrus18
Derivation and analysis of human somatic sensory neuron subtypes facilitated through fluorescent hPSC reporters18
Spatially resolved transcriptomics identifies intercellular signaling post-ischemic stroke that controls neural stem cell proliferation17
MAC-1 marks a quiescent and functionally superior HSC subset during regeneration17
Diversity-in-a-dish: A practical framework for hiPSC model development17
Differentiation of brain and retinal organoids from confluent cultures of pluripotent stem cells connected by nerve-like axonal projections of optic origin17
Zika virus induces FOXG1 nuclear displacement and downregulation in human neural progenitors17
A conserved function of EZH2-PRC2 in repression of primitive endoderm fate in mouse and human pluripotent cells17
Mitochondrial toxins cause widespread downregulation of pathways in X-linked dystonia-parkinsonism patient-derived neurons17
The KAP1 chromatin regulator and Paupar long non-coding RNA control subventricular zone neural stem cell maintenance and neurogenesis17
Human microglial cells as a therapeutic target in a neurodevelopmental disease model17
Prolonged generation of multi-lineage blood cells in wild-type animals from pluripotent stem cells17
Engineering human neuronal diversity: Morphogens and stem cell technologies for neurodevelopmental biology17
Purification of human iPSC-derived cells at large scale using microRNA switch and magnetic-activated cell sorting17
Graft-derived horizontal cells contribute to host-graft synapses in degenerated retinas after retinal organoid transplantation17
Satellite glial contact enhances differentiation and maturation of human iPSC-derived sensory neurons17
Modeling glioma intratumoral heterogeneity with primary human neural stem and progenitor cells17
Generation, genomic characterization, and differentiation of triploid human embryonic stem cells17
Human iPSC-derived neural progenitor cells secreting GDNF provide protection in rodent models of ALS and retinal degeneration17
Astrocytes originated from neural stem cells drive the regenerative remodeling of pathologic CSPGs in spinal cord injury17
Ins and outs of HSCs and VEGF-induced vascular remodeling: Toward improved HSC mobilization and engraftment17
Human organoids: Fit for drug discovery?17
Long noncoding RNA Lnc530 localizes on R-loops and regulates R-loop formation and genomic stability in mouse embryonic stem cells16
Subventricular zone adult mouse neural stem cells require insulin receptor for self-renewal16
Pluripotent cell states and unexpected fates16
Retinoic acid signaling guides the efficiency of inner ear organoid-genesis and governs sensory-nonsensory fate specification16
Adult hippocampal neurogenesis: New avenues for treatment of brain disorders16
An efficient, non-viral arrayed CRISPR screening platform for iPSC-derived myeloid and microglia models16
A defined roadmap of radial glia and astrocyte differentiation from human pluripotent stem cells16
Chitinase-like protein 3: A novel niche factor for mouse neural stem cells16
Derivation of transplantable human thyroid follicular epithelial cells from induced pluripotent stem cells16
A Chemically Defined Feeder-free System for the Establishment and Maintenance of the Human Naive Pluripotent State16
Seamless and non-destructive monitoring of extracellular microRNAs during cardiac differentiation from human pluripotent stem cells15
Neuroinflammation and EIF2 Signaling Persist despite Antiretroviral Treatment in an hiPSC Tri-culture Model of HIV Infection15
Self-assembling 3D vessel-on-chip model with hiPSC-derived astrocytes15
METTL3 uncouples chromatin accessibility from transcription during retinal development15
Small-molecule screen reveals pathways that regulate C4 secretion in stem cell-derived astrocytes15
GSK3α negatively regulates GSK3β by decreasing its protein levels and enzymatic activity in mouse embryonic stem cells15
Interleukin-1β induces trained innate immunity in human hematopoietic progenitor cells in vitro15
Neuroblast migration along cellular substrates in the developing porcine brain15
Spatial transcriptomics reveals molecular cues underlying the site specificity of the adult mouse oral mucosa and its stem cell niches15
PI3Kβ-regulated β-catenin mediates EZH2 removal from promoters controlling primed human ESC stemness and primitive streak gene expression15
Oligodendrocytes in human induced pluripotent stem cell-derived cortical grafts remyelinate adult rat and human cortical neurons15
ERRγ agonist under mechanical stretching manifests hypertrophic cardiomyopathy phenotypes of engineered cardiac tissue through maturation15
Patient-derived parathyroid organoids as a tracer and drug-screening application model15
Accelerated mitochondrial dynamics promote spermatogonial differentiation15
APOE4 impacts cortical neurodevelopment and alters network formation in human brain organoids15
SARS-CoV-2 infection of airway organoids reveals conserved use of Tetraspanin-8 by Ancestral, Delta, and Omicron variants15
Development of a high-efficiency induction system for embryonic oral epithelium from human pluripotent stem cells15
SnapShot: Reporting practices for publishing results with human PSCs and tissue stem cells14
Cell size regulates human endoderm specification through actomyosin-dependent AMOT-YAP signaling14
Proteomics-based receptor-ligand matching enhances differentiation maturity of human-stem-cell-derived neurons14
Sleep deprivation induces corneal epithelial progenitor cell over-expansion through disruption of redox homeostasis in the tear film14
Generation of a TPH2-EGFP reporter cell line for purification and monitoring of human serotonin neurons in vitro and in vivo14
The urgent need for clear and concise regulations on exosome-based interventions14
DOT1L interaction partner AF10 controls patterning of H3K79 methylation and RNA polymerase II to maintain cell identity14
AT7867 promotes pancreatic progenitor differentiation of human iPSCs14
A critical role of retinoic acid concentration for the induction of a fully human-like atrial action potential phenotype in hiPSC-CM14
Advances in intravital imaging of adult neurogenesis in mice14
Unraveling the impact of ZZZ3 on the mTOR/ribosome pathway in human embryonic stem cells homeostasis14
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