Stem Cell Reports

Papers
(The TQCC of Stem Cell Reports is 15. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-04-01 to 2025-04-01.)
ArticleCitations
Astrocyte-derived PTN alleviates deficits in hippocampal neurogenesis and cognition in models of multiple sclerosis193
A versatile in vivo platform for reversible control of transgene expression in adult tissues192
Capture primed pluripotency in guinea pig185
Investigating the feasibility and ethical implications of phenotypic screening using stem cell-derived tissue models to detect and manage disease157
Troy/Tnfrsf19 marks epidermal cells that govern interfollicular epidermal renewal and cornification90
Robust generation of photoreceptor-dominant retinal organoids from porcine induced pluripotent stem cells89
Salt-inducible kinases transduce mechanical forces into the specification of the pancreatic endocrine lineage88
100 plus years of stem cell research—20 years of ISSCR87
Donor perspectives on informed consent and use of biospecimens for brain organoid research80
YAP signaling in horizontal basal cells promotes the regeneration of olfactory epithelium after injury79
Cell transplantation-based regenerative medicine in liver diseases78
Fractalkine signaling regulates oligodendroglial cell genesis from SVZ precursor cells77
Competency of iPSC-derived retinas in MHC-mismatched transplantation in non-human primates75
Deriving waveform parameters from calcium transients in human iPSC-derived cardiomyocytes to predict cardiac activity with machine learning67
MAC-1 marks a quiescent and functionally superior HSC subset during regeneration67
DDX41 is needed for pre- and postnatal hematopoietic stem cell differentiation in mice66
Transparency in controversial research: A review of human embryo research publication ethical disclosure statements65
USP7 inactivation suppresses APC-mutant intestinal hyperproliferation and tumor development64
Zika virus induces FOXG1 nuclear displacement and downregulation in human neural progenitors63
Characterization of perivascular alveolar epithelial stem cells and their niche in lung homeostasis and cancer54
ERK5 promotes autocrine expression to sustain mitogenic balance for cell fate specification in human pluripotent stem cells53
Astrocytes originated from neural stem cells drive the regenerative remodeling of pathologic CSPGs in spinal cord injury52
Automatic identification of small molecules that promote cell conversion and reprogramming51
Reconciling Flux Experiments for Quantitative Modeling of Normal and Malignant Hematopoietic Stem/Progenitor Dynamics51
Modulation of APLNR Signaling Is Required during the Development and Maintenance of the Hematopoietic System48
A regulatory role for CHD4 in maintenance of the spermatogonial stem cell pool48
From embryos to embryoids: How external signals and self-organization drive embryonic development46
Reprogramming epiblast stem cells into pre-implantation blastocyst cell-like cells45
A BMP4-p38 MAPK signaling axis controls ISL1 protein stability and activity during cardiogenesis44
Uncoupling key determinants of hematopoietic stem cell engraftment through cell-specific and temporally controlled recipient conditioning44
Reflection on the enactment and impact of safety laws for regenerative medicine in Japan44
Lesch-Nyhan disease causes impaired energy metabolism and reduced developmental potential in midbrain dopaminergic cells43
Reconstruction of dynamic regulatory networks reveals signaling-induced topology changes associated with germ layer specification41
Patients' perspectives on the derivation and use of organoids41
SETD4 cells contribute to brain development and maintain adult stem cell reservoir for neurogenesis40
Insertion/deletion and microsatellite alteration profiles in induced pluripotent stem cells40
A eutherian-specific microRNA controls the translation of Satb2 in a model of cortical differentiation40
Rag2−/− accelerates lipofuscin accumulation in the brain: Implications for human stem cell brain transplantation studies40
Minichromosome maintenance protein 10 (mcm10) regulates hematopoietic stem cell emergence in the zebrafish embryo39
Prolonged generation of multi-lineage blood cells in wild-type animals from pluripotent stem cells39
Long noncoding RNA Lnc530 localizes on R-loops and regulates R-loop formation and genomic stability in mouse embryonic stem cells39
What has single-cell transcriptomics taught us about long non-coding RNAs in the ventricular-subventricular zone?38
A pluripotent developmental state confers a low fidelity of chromosome segregation38
The LRRK2 kinase substrates RAB8a and RAB10 contribute complementary but distinct disease-relevant phenotypes in human neurons37
Deciphering the differential impact of thrombopoietin/MPL signaling on hematopoietic stem/progenitor cell function in bone marrow and spleen35
A functional crosstalk between the H3K9 methylation writers and their reader HP1 in safeguarding embryonic stem cell identity35
Reduction of H3K9 methylation by G9a inhibitors improves the development of mouse SCNT embryos35
Argonaute proteins regulate a specific network of genes through KLF4 in mouse embryonic stem cells34
Retinal transplant immunology and advancements34
Generation, genomic characterization, and differentiation of triploid human embryonic stem cells33
Genetic and epigenetic determinants of reactivation of Mecp2 and the inactive X chromosome in neural stem cells33
Agarose microgel culture delineates lumenogenesis in naive and primed human pluripotent stem cells33
Increased tissue stiffness triggers contractile dysfunction and telomere shortening in dystrophic cardiomyocytes33
Subcellular RNA distribution and its change during human embryonic stem cell differentiation33
NK cell content does not seem to influence engraftment in ex vivo T cell depleted haploidentical stem cell transplantation33
ER stress and lipid imbalance drive diabetic embryonic cardiomyopathy in an organoid model of human heart development32
Single-cell mapping of regenerative and fibrotic healing responses after musculoskeletal injury32
Autism- and intellectual disability-associated MYT1L mutation alters human cortical interneuron differentiation, maturation, and physiology32
Generation of innervated cochlear organoid recapitulates early development of auditory unit32
Exclusive generation of rat spermatozoa in sterile mice utilizing blastocyst complementation with pluripotent stem cells32
PCSK9 regulates the NODAL signaling pathway and cellular proliferation in hiPSCs32
LOTUS overexpression via ex vivo gene transduction further promotes recovery of motor function following human iPSC-NS/PC transplantation for contusive spinal cord injury31
Inducing human retinal pigment epithelium-like cells from somatic tissue31
Thymic stromal lymphopoietin controls hair growth31
Proinflammatory phenotype of iPS cell-derived JAK2 V617F megakaryocytes induces fibrosis in 3D in vitro bone marrow niche31
Silencing of p53 and CDKN1A establishes sustainable immortalized megakaryocyte progenitor cells from human iPSCs31
Serine Racemase mediates subventricular zone neurogenesis via fatty acid metabolism31
CHD4 ensures stem cell lineage fidelity during skeletal muscle regeneration30
The impact of consanguinity on the design of iPSC banks30
Efficient transgenesis and homology-directed gene targeting in monolayers of primary human small intestinal and colonic epithelial stem cells30
The global downregulation of protein synthesis observed during hepatogenic maturation is associated with a decrease in TOP mRNA translation29
Tissue origin of cytotoxic natural killer cells dictates their differential roles in mouse digit tip regeneration and progenitor cell survival29
Genome-wide analyses reveal the detrimental impacts of SARS-CoV-2 viral gene Orf9c on human pluripotent stem cell-derived cardiomyocytes29
Characterization of N-terminal RYR2 variants outside CPVT1 hotspot regions using patient iPSCs reveal pathogenesis and therapeutic potential29
IRX5 promotes DNA damage repair and activation of hair follicle stem cells29
Selective elimination of pluripotent stem cells by PIKfyve specific inhibitors29
Characterization of the epidermal-dermal junction in hiPSC-derived skin organoids28
A phenotypic screen of Marfan syndrome iPSC-derived vascular smooth muscle cells uncovers GSK3β as a new target28
Re-generation of cytotoxic γδT cells with distinctive signatures from human γδT-derived iPSCs28
Plating human iPSC lines on micropatterned substrates reveals role for ITGB1 nsSNV in endoderm formation28
Ribosomal proteins regulate 2-cell-stage transcriptome in mouse embryonic stem cells28
Recognizing the ethical implications of stem cell research: A call for broadening the scope28
mTORC1 mediates the expansion of hematopoietic stem and progenitor cells through ribosome biogenesis protein Urb2 in zebrafish28
Human retinal organoids harboring IMPG2 mutations exhibit a photoreceptor outer segment phenotype that models advanced retinitis pigmentosa28
Modulation by DREADD reveals the therapeutic effect of human iPSC-derived neuronal activity on functional recovery after spinal cord injury27
Human iPSC-Derived Hippocampal Spheroids: An Innovative Tool for Stratifying Alzheimer Disease Patient-Specific Cellular Phenotypes and Developing Therapies27
Human iPSC-derived neural progenitor cells secreting GDNF provide protection in rodent models of ALS and retinal degeneration26
Putting Science into Standards workshop on standards for organ-on-chip26
FOXO4-SP6 axis controls surface epithelium commitment by mediating epigenomic remodeling26
Cardiomyocytes recruit monocytes upon SARS-CoV-2 infection by secreting CCL226
Age-related pathological impairments in directly reprogrammed dopaminergic neurons derived from patients with idiopathic Parkinson’s disease25
RYBP modulates embryonic neurogenesis involving the Notch signaling pathway in a PRC1-independent pattern25
Cell-autonomous and non-cell-autonomous roles of NKCC1 in regulating neural stem cell quiescence in the hippocampal dentate gyrus25
Familial Alzheimer’s disease-associated PSEN1 mutations affect neurodevelopment through increased Notch signaling25
Attrition of X Chromosome Inactivation in Aged Hematopoietic Stem Cells25
PAX6-positive microglia evolve locally in hiPSC-derived ocular organoids25
Effect of Notch1 signaling on muscle engraftment and maturation from pluripotent stem cells25
The relevance of mitochondrial DNA variants fluctuation during reprogramming and neuronal differentiation of human iPSCs25
Human iPSC-based neurodevelopmental models of globoid cell leukodystrophy uncover patient- and cell type-specific disease phenotypes25
Autophagy is essential for human myelopoiesis25
Exploiting O-GlcNAc dyshomeostasis to screen O-GlcNAc transferase intellectual disability variants25
CRISPR/Cas9/AAV9-mediated in vivo editing identifies MYC regulation of 3D genome in skeletal muscle stem cell24
Ranolazine rescues the heart failure phenotype of PLN-deficient human pluripotent stem cell-derived cardiomyocytes23
A human pluripotent stem cell-based model of SARS-CoV-2 infection reveals an ACE2-independent inflammatory activation of vascular endothelial cells through TLR423
Purification of human iPSC-derived cells at large scale using microRNA switch and magnetic-activated cell sorting23
Acquisition of NOTCH dependence is a hallmark of human intestinal stem cell maturation23
Retention of ERK in the cytoplasm mediates the pluripotency of embryonic stem cells23
PINK1 deficiency alters muscle stem cell fate decision and muscle regenerative capacity22
Improved hematopoietic stem cell transplantation upon inhibition of natural killer cell-derived interferon-gamma22
Generation of functionally competent hepatic stellate cells from human stem cells to model liver fibrosis in vitro22
Fibroblast growth factor 6 regulates sizing of the muscle stem cell pool22
Human Pluripotent Stem Cell-Derived Intestinal Organoids Model SARS-CoV-2 Infection Revealing a Common Epithelial Inflammatory Response21
MSCohi-O lenses for long-term retention of mesenchymal stem cells on ocular surface as a therapeutic approach for chronic ocular graft-versus-host disease21
Differentiation of brain and retinal organoids from confluent cultures of pluripotent stem cells connected by nerve-like axonal projections of optic origin21
A dual-color PAX7 and MYF5 in vivo reporter to investigate muscle stem cell heterogeneity in regeneration and aging21
The chromatin accessibility landscape reveals distinct transcriptional regulation in the induction of human primordial germ cell-like cells from pluripotent stem cells21
Eyes open on stem cells21
Human microglial cells as a therapeutic target in a neurodevelopmental disease model21
ALS-related p97 R155H mutation disrupts lysophagy in iPSC-derived motor neurons21
Dissecting the impact of differentiation stage, replicative history, and cell type composition on epigenetic clocks21
Expanding homogeneous culture of human primordial germ cell-like cells maintaining germline features without serum or feeder layers21
Inclusivity and diversity: Integrating international perspectives on stem cell challenges and potential20
Making neurons, made easy: The use of Neurogenin-2 in neuronal differentiation20
Laminin111-based defined culture promoting self-renewing human pluripotent stem cells with properties of the early post-implantation epiblast20
Erythroid precursors and progenitors suppress adaptive immunity and get invaded by SARS-CoV-220
Survival of an HLA-mismatched, bioengineered RPE implant in dry age-related macular degeneration19
Differentiation success of reprogrammed cells is heterogeneous in vivo and modulated by somatic cell identity memory19
Organoids are not organs: Sources of variation and misinformation in organoid biology19
Auxin-degron system identifies immediate mechanisms of OCT419
Programming of neural progenitors of the adult subependymal zone towards a glutamatergic neuron lineage by neurogenin 219
High-dose radiation preferentially induces the clonal expansion of hematopoietic progenitor cells over mature T and B cells in mouse bone marrow19
A Chemically Defined Feeder-free System for the Establishment and Maintenance of the Human Naive Pluripotent State19
Assessing patient perception of risk in ocular stem cell therapies19
In and out: Benchmarking in vitro, in vivo, ex vivo, and xenografting approaches for an integrative brain disease modeling pipeline19
Cardiac differentiation roadmap for analysis of plasticity and balanced lineage commitment19
An efficient, non-viral arrayed CRISPR screening platform for iPSC-derived myeloid and microglia models19
Chemically defined and dynamic click hydrogels support hair cell differentiation in human inner ear organoids19
Neuronal silence as a prosurvival factor for adult-born olfactory bulb interneurons19
From development toward therapeutics, a collaborative effort on blood progenitors18
Esrrb is a cell-cycle-dependent associated factor balancing pluripotency and XEN differentiation18
Generation of pancreatic progenitors from human pluripotent stem cells by small molecules18
TGFβ superfamily signaling regulates the state of human stem cell pluripotency and capacity to create well-structured telencephalic organoids18
Developmental thyroid disruption permanently affects the neuroglial output in the murine subventricular zone18
Single-cell spatiotemporal analysis reveals cell fates and functions of transplanted mesenchymal stromal cells during bone repair18
SARS-CoV-2 infection of airway organoids reveals conserved use of Tetraspanin-8 by Ancestral, Delta, and Omicron variants18
Homozygous ALS-linked FUS P525L mutations cell- autonomously perturb transcriptome profile and chemoreceptor signaling in human iPSC microglia18
The histone H3.3 chaperone HIRA restrains erythroid-biased differentiation of adult hematopoietic stem cells18
Functional mouse hepatocytes derived from interspecies chimeric livers effectively mitigate chronic liver fibrosis18
Remodeling of H3K9me3 during the pluripotent to totipotent-like state transition18
Genome-wide screening reveals essential roles for HOX genes and imprinted genes during caudal neurogenesis of human embryonic stem cells18
Patient-derived parathyroid organoids as a tracer and drug-screening application model18
Integrated transcriptome-proteome analyses of human stem cells reveal source-dependent differences in their regenerative signature18
Single-cell characterization of neovascularization using hiPSC-derived endothelial cells in a 3D microenvironment18
From responsibility to responsibilization in stem cell research: An ethical framework18
Differentiation of uniparental human embryonic stem cells into granulosa cells reveals a paternal contribution to gonadal development18
Connie Eaves (1944–2024)18
Protein-encapsulated doxorubicin reduces cardiotoxicity in hiPSC-cardiomyocytes and cardiac spheroids while maintaining anticancer efficacy18
Guidelines for managing and using the digital phenotypes of pluripotent stem cell lines18
ISSCR’s Guidelines for Stem Cell Research and Clinical Translation: Supporting development of safe and efficacious stem cell-based interventions18
Patient-specific iPSC-derived endothelial cells reveal aberrant p38 MAPK signaling in atypical hemolytic uremic syndrome18
Organoid models of breathing disorders reveal patterning defect of hindbrain neurons caused by PHOX2B-PARMs18
High-throughput screening on cochlear organoids identifies VEGFR-MEK-TGFB1 signaling promoting hair cell reprogramming17
How to promote the accessibility of technology in the era of hESC patents—A comparative analysis of the systems of the US and China17
Unproven cell interventions in Poland and the exploitation of European Union law on advanced therapy medicinal products17
Single-cell transcriptomics reveals correct developmental dynamics and high-quality midbrain cell types by improved hESC differentiation17
Rescuing human fetal tissue research in the United States: A call for additional regulatory reform17
Evidence for in vitro extensive proliferation of adult hepatocytes and biliary epithelial cells17
A functional hiPSC-cortical neuron differentiation and maturation model and its application to neurological disorders17
Chitinase-like protein 3: A novel niche factor for mouse neural stem cells17
Weighing up the evidence used by direct-to-consumer stem cell businesses17
Enrichment of stem cell-derived pancreatic beta-like cells and controlled graft size through pharmacological removal of proliferating cells17
DOT1L regulates lung developmental epithelial cell fate and adult alveolar stem cell differentiation after acute injury17
An acidic residue within the OCT4 dimerization interface of SOX17 is necessary and sufficient to overcome its pluripotency-inducing activity17
Growth/differentiation factor 15 controls ependymal and stem cell number in the V-SVZ17
Single-cell transcriptomics identifies master regulators of neurodegeneration in SOD1 ALS iPSC-derived motor neurons17
Derivation of feeder-free human extended pluripotent stem cells17
Differentiation of human induced pluripotent stem cells to authentic macrophages using a defined, serum-free, open-source medium17
Small-molecule screen reveals pathways that regulate C4 secretion in stem cell-derived astrocytes16
Low Immunogenicity and Immunosuppressive Properties of Human ESC- and iPSC-Derived Retinas16
Progesterone receptor-DNA methylation crosstalk regulates depletion of uterine leiomyoma stem cells: A potential therapeutic target16
Biomanufacturing in low Earth orbit for regenerative medicine16
Embryo size regulates the timing and mechanism of pluripotent tissue morphogenesis16
Characterization of hiPSC-Derived Muscle Progenitors Reveals Distinctive Markers for Myogenic Cell Purification Toward Cell Therapy16
Dysregulated ECM remodeling proteins lead to aberrant osteogenesis of Costello syndrome iPSCs16
Upregulation of the JAK-STAT pathway promotes maturation of human embryonic stem cell-derived cardiomyocytes16
Non-viral Induction of Transgene-free iPSCs from Somatic Fibroblasts of Multiple Mammalian Species16
Loss of TBX3 enhances pancreatic progenitor generation from human pluripotent stem cells16
A library of induced pluripotent stem cells from clinically well-characterized, diverse healthy human individuals16
Physical exercise promotes integration of grafted cells and functional recovery in an acute stroke rat model16
Survey of Japanese researchers and the public regarding the culture of human embryos in vitro beyond 14 days15
Complex haploinsufficiency in pluripotent cells yields somatic cells with DNA methylation abnormalities and pluripotency induction defects15
PIM3-AMPK-HDAC4/5 axis restricts MuERVL-marked 2-cell-like state in embryonic stem cells15
IL-18R-mediated HSC quiescence and MLKL-dependent cell death limit hematopoiesis during infection-induced shock15
Allogeneic offspring produced by induction of PD-L1 in spermatogonial stem cells via self-renewal stimulation15
Activated mesenchymal stem/stromal cells promote myeloid cell differentiation via CCL2/CCR2 signaling15
Patient engagement and satisfaction with early phase cell therapy clinical trials at a tertiary inflammatory bowel disease center15
Subventricular zone adult mouse neural stem cells require insulin receptor for self-renewal15
Pluripotent cell states and unexpected fates15
Maternal Western-style diet remodels the transcriptional landscape of fetal hematopoietic stem and progenitor cells in rhesus macaques15
SinCMat: A single-cell-based method for predicting functional maturation transcription factors15
Conclusive demonstration of iatrogenic Alzheimer’s disease transmission in a model of stem cell transplantation15
Neuroblast migration along cellular substrates in the developing porcine brain15
Directly induced human retinal ganglion cells mimic fetal RGCs and are neuroprotective after transplantation in vivo15
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