Stem Cell Reports

Papers
(The median citation count of Stem Cell Reports is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-05-01 to 2026-05-01.)
ArticleCitations
MSCohi-O lenses for long-term retention of mesenchymal stem cells on ocular surface as a therapeutic approach for chronic ocular graft-versus-host disease109
Stem cells in your YouTube feed: The complex landscape and unexpected mediators of online information104
Hsp70-Bim interaction mediated mitophagy as a potential therapeutic target for CML stem cells98
USP7 inactivation suppresses APC-mutant intestinal hyperproliferation and tumor development83
Familial Alzheimer’s disease-associated PSEN1 mutations affect neurodevelopment through increased Notch signaling70
Effect of Notch1 signaling on muscle engraftment and maturation from pluripotent stem cells65
Dissecting the impact of differentiation stage, replicative history, and cell type composition on epigenetic clocks62
Pen-2 regulates glial homeostasis by coordinating self-renewal and transdifferentiation programs in oligodendrocyte precursor cells57
Ribosomal proteins regulate 2-cell-stage transcriptome in mouse embryonic stem cells54
Diversity of cortical progenitors directs neuronal layer formation and regional glial patterning51
A versatile in vivo platform for reversible control of transgene expression in adult tissues49
Differentiation success of reprogrammed cells is heterogeneous in vivo and modulated by somatic cell identity memory48
Human iPSC-Derived Hippocampal Spheroids: An Innovative Tool for Stratifying Alzheimer Disease Patient-Specific Cellular Phenotypes and Developing Therapies48
Single-cell characterization of neovascularization using hiPSC-derived endothelial cells in a 3D microenvironment47
Single-cell transcriptomics reveals correct developmental dynamics and high-quality midbrain cell types by improved hESC differentiation46
Anesthetic-induced neurodevelopmental changes with region-specific responses to propofol in forebrain organoids46
Discovery of kidney disease targets using multimodal human podocyte injury models46
Pluripotent stem cell lines available for use in clinical applications: A comprehensive overview45
Functionally redundant roles of ID family proteins in spermatogonial stem cells43
In and out: Benchmarking in vitro, in vivo, ex vivo, and xenografting approaches for an integrative brain disease modeling pipeline43
DOT1L regulates lung developmental epithelial cell fate and adult alveolar stem cell differentiation after acute injury42
Bone morphogenetic protein 4 induces hematopoietic stem cell development from murine hemogenic endothelial cells in culture41
Connie Eaves (1944–2024)41
Complex haploinsufficiency in pluripotent cells yields somatic cells with DNA methylation abnormalities and pluripotency induction defects40
H1FOO-DD promotes efficiency and uniformity in reprogramming to naive pluripotency40
Microbiota from young mice restore the function of aged ISCs40
Human iPSC-derived neural progenitor cells rescue motor function and brain pathology in symptomatic Canavan disease mice39
Human spinal GABA neurons survive and mature in the injured nonhuman primate spinal cord39
A novel paradigm for single-cell annotation in stem cell research38
Plasticity of ocular surface epithelia: Using a murine model of limbal stem cell deficiency to delineate metaplasia and transdifferentiation38
Stabilization of cell-cell adhesions prevents symmetry breaking and locks in pluripotency in 3D gastruloids38
Single-cell approaches define two groups of mammalian oligodendrocyte precursor cells and their evolution over developmental time37
Response to: SARS-CoV-2 and type I interferon signaling in brain endothelial cells: Blurring the lines between friend or foe36
Gains of 20q11.21 in human pluripotent stem cells: Insights from cancer research36
Discovery of NANOG enhancers and their essential roles in self-renewal and differentiation in human embryonic stem cells36
Searching for information about stem cells online in an age of artificial intelligence: How should the stem cell community respond?35
Aged human serum induces vascular changes in an isogenic co-culture venule model35
Benchmarking and optimizing Perturb-seq in differentiating human pluripotent stem cells34
Extracellular-vesicle-mediated transfer of let-7b/7c promotes the proliferation of transition-state spermatogonia in neonatal mouse testis34
Medium acidosis drives cardiac differentiation during mesendoderm cell fate specification from human pluripotent stem cells34
Human fetal tissue is critical for biomedical research33
Ependymal and neural stem cells are close relatives33
BRD9-containing non-canonical BAF complex maintains somatic cell transcriptome and acts as a barrier to human reprogramming33
Upregulation of β-catenin due to loss of miR-139 contributes to motor neuron death in amyotrophic lateral sclerosis33
Gene reactivation upon erosion of X chromosome inactivation in female hiPSCs is predictable yet variable and persists through differentiation32
MEF2C/p300-mediated epigenetic remodeling promotes the maturation of induced cardiomyocytes32
Lessons learnt, and still to learn, in first in human stem cell trials32
Selective Cav1.3 inhibition promotes survival of transplanted dopaminergic neurons via the CaMKII-p65-p53 pathway30
What does “appropriate scientific justification” mean for the review of human pluripotent stem cell, embryo, and related research?30
Messenger RNA delivery into Sertoli cells restores fertility to congenitally infertile male mice30
A humanized engineered heart tissue platform for cardiotoxicity assessment30
Public perceptions and expectations: Disentangling the hope and hype of organoid research29
The role of m6A RNA methylation in the maintenance of X chromosome inactivation and X-to-autosome dosage compensation in early embryonic lineages29
Neutrophils as regulators of macrophage-induced inflammation in a setting of allogeneic bone marrow transplantation29
Depletion of WFS1 compromises mitochondrial function in hiPSC-derived neuronal models of Wolfram syndrome29
Glutamine boosts intestinal stem cell-mediated small intestinal epithelial development during early weaning: Involvement of WNT signaling29
UHRF1 interacts with snRNAs and regulates alternative splicing in mouse spermatogonial stem cells29
Generation of highly pure pluripotent stem cell-derived myogenic progenitor cells and myotubes29
What we thought we knew about TNF—And what we now must re-learn28
Mechanical force-promoted osteoclastic differentiation via periodontal ligament stem cell exosomal protein ANXA328
Transplantation of human pluripotent stem cell-derived retinal sheet in a primate model of macular hole28
CD49b identifies functionally and epigenetically distinct subsets of lineage-biased hematopoietic stem cells28
A single cell-based computational platform to identify chemical compounds targeting desired sets of transcription factors for cellular conversion28
Granulin loss of function in human mature brain organoids implicates astrocytes in TDP-43 pathology27
Astrocytes modulate neurodegenerative phenotypes associated with glaucoma in OPTN(E50K) human stem cell-derived retinal ganglion cells27
Metabolic remodeling in hiPSC-derived myofibers carrying the m.3243A>G mutation27
Parallel use of human stem cell lung and heart models provide insights for SARS-CoV-2 treatment27
Inhibition of N-myristoyltransferase in pluripotent stem cells promotes the naive state in mice and elicits trophectoderm and primitive endoderm markers in humans27
Low fucosylation defines the glycocalyx of progenitor cells and melanocytes in the human limbal stem cell niche26
Non-canonical roles of CFH in retinal pigment epithelial cells revealed by dysfunctional rare CFH variants26
Leveraging CRISPR activation for rapid assessment of gene editing products in human pluripotent stem cells26
DeePhys: A machine learning–assisted platform for electrophysiological phenotyping of human neuronal networks26
Atypical cell cycle regulation over neural stem cell expansion26
Molecular profiling of stem cell-derived retinal pigment epithelial cell differentiation established for clinical translation26
Patient-specific and gene-corrected induced pluripotent stem cell-derived endothelial cells elucidate single-cell phenotype of pulmonary veno-occlusive disease25
Characterizing hypoxia-orchestrated post-stroke changes in oligodendrocyte precursor cells for optimized cell therapy25
Fractalkine enhances oligodendrocyte regeneration and remyelination in a demyelination mouse model25
Histone methyltransferase Setd8 preserves chromatin accessibility to safeguard retinal progenitor cell identity during development24
Aggregation of cryopreserved mid-hindgut endoderm for more reliable and reproducible hPSC-derived small intestinal organoid generation24
Taking the leap toward human-specific nonanimal methodologies: The need for harmonizing global policies for microphysiological systems24
Modeling sex differences in humans using isogenic induced pluripotent stem cells24
Induction of astrocyte reactivity promotes neurodegeneration in human pluripotent stem cell models23
Modeling in vivo induction of gastric insulin-secreting cells using transplanted human stomach organoids23
Titin-truncating variants in hiPSC cardiomyocytes induce pathogenic proteinopathy and sarcomere defects with preserved core contractile machinery23
Critical considerations for public engagement in stem cell-related research23
Elimination of tumorigenic pluripotent stem cells from their differentiated cell therapy products: An important step toward ensuring safe cell therapy23
Derivation of functional trophoblast stem cells from primed human pluripotent stem cells23
Mowat-Wilson syndrome factor ZEB2 controls early formation of human neural crest through BMP signaling modulation23
Involvement of LIN28A in Wnt-dependent regulation of hippocampal neurogenesis in the aging brain22
New legal category of ‘advanced regenerative medicine treatment’ in Korea’s amended regenerative medicine law: comparative lessons from Japan22
Generation of canine induced pluripotent stem cells under feeder-free conditions using Sendai virus vector encoding six canine reprogramming factors22
Prosaposin maintains adult neural stem cells in a state associated with deep quiescence22
The trophectoderm acts as a niche for the inner cell mass through C/EBPα-regulated IL-6 signaling22
Interspecies chimerism with human embryonic stem cells generates functional human dopamine neurons at low efficiency22
A year of engagement and growth: ISSCR’s year-end message from the president 2022–202321
The Wnt-dependent master regulator NKX1-2 controls mouse pre-implantation development21
Ebola virus infection induces a delayed type I IFN response in bystander cells and the shutdown of key liver genes in human iPSC-derived hepatocytes21
AAV-mediated gene augmentation therapy of CRB1 patient-derived retinal organoids restores the histological and transcriptional retinal phenotype21
Embryonic stem cell ERK, AKT, plus STAT3 response dynamics combinatorics are heterogeneous but NANOG state independent21
Toward standardized iPSC testing: Insights from a multi-year international Quality Assessment Round21
Small-molecule inhibitor cocktail promotes the proliferation of pre-existing liver progenitor cells21
Lineage Tracing Reveals the Bipotency of SOX9+ Hepatocytes during Liver Regeneration20
Toti: An integrated multi-omics database to decipher the epigenetic regulation of gene expression in totipotent stem cells20
Businesses marketing purported stem cell treatments and exosome therapies for COVID-19: An analysis of direct-to-consumer online advertising claims20
The novel tRF-23 promotes osteogenic differentiation of hBMSCs and protects against bone loss in ovariectomized mice20
MIXL1 activation in endoderm differentiation of human induced pluripotent stem cells20
Reconstituted ovaries self-assemble without an ovarian surface epithelium20
Scalable generation of sensory neurons from human pluripotent stem cells20
Fibroblast fate determination during cardiac reprogramming by remodeling of actin filaments20
Ribosome biogenesis controls cranial suture MSC fate via the complement pathway in mouse and human iPSC models20
Human primed and naïve PSCs are both able to differentiate into trophoblast stem cells19
Aberrant nucleosome organization in mouse SCNT embryos revealed by ULI-MNase-seq19
The global downregulation of protein synthesis observed during hepatogenic maturation is associated with a decrease in TOP mRNA translation19
Deep-supercooling preservation of stem cell spheroids for chondral defect repairment19
RBFOX2-dependent alternative splicing of Numb regulates Notch signaling during muscle stem cell activation19
Identification of glioblastoma stem cell-associated lncRNAs using single-cell RNA sequencing datasets19
ER stress and lipid imbalance drive diabetic embryonic cardiomyopathy in an organoid model of human heart development19
Perinuclear mitochondrial clustering for mesenchymal-to-epithelial transition in pluripotency induction19
Micro-patterned culture of iPSC-derived alveolar and airway cells distinguishes SARS-CoV-2 variants19
Exit from naive pluripotency proceeds with variable latency but without asymmetric division to generate population heterogeneity19
Dual inhibition of MAPK and PI3K/AKT pathways enhances maturation of human iPSC-derived cardiomyocytes19
Human CRX regulates photoreceptor cells development via bidirectional transcriptional control in retinal organoids18
Engineering human neuronal diversity: Morphogens and stem cell technologies for neurodevelopmental biology18
Differentiation of brain and retinal organoids from confluent cultures of pluripotent stem cells connected by nerve-like axonal projections of optic origin18
Cell-autonomous and non-cell-autonomous roles of NKCC1 in regulating neural stem cell quiescence in the hippocampal dentate gyrus18
Ins and outs of HSCs and VEGF-induced vascular remodeling: Toward improved HSC mobilization and engraftment18
Derivation and analysis of human somatic sensory neuron subtypes facilitated through fluorescent hPSC reporters18
A conserved function of EZH2-PRC2 in repression of primitive endoderm fate in mouse and human pluripotent cells18
Argonaute proteins regulate a specific network of genes through KLF4 in mouse embryonic stem cells17
Generating high-quality porcine iPSCs with the new medium cocktail LACID17
Purification of human iPSC-derived cells at large scale using microRNA switch and magnetic-activated cell sorting17
The KAP1 chromatin regulator and Paupar long non-coding RNA control subventricular zone neural stem cell maintenance and neurogenesis17
Human iPSC-derived neural progenitor cells secreting GDNF provide protection in rodent models of ALS and retinal degeneration17
Adult hippocampal neurogenesis: New avenues for treatment of brain disorders17
Long noncoding RNA Lnc530 localizes on R-loops and regulates R-loop formation and genomic stability in mouse embryonic stem cells17
Modeling glioma intratumoral heterogeneity with primary human neural stem and progenitor cells17
Zika virus induces FOXG1 nuclear displacement and downregulation in human neural progenitors17
Astrocytes originated from neural stem cells drive the regenerative remodeling of pathologic CSPGs in spinal cord injury17
Diversity-in-a-dish: A practical framework for hiPSC model development16
Prolonged generation of multi-lineage blood cells in wild-type animals from pluripotent stem cells16
Interleukin-1β induces trained innate immunity in human hematopoietic progenitor cells in vitro16
Oligodendrocytes in human induced pluripotent stem cell-derived cortical grafts remyelinate adult rat and human cortical neurons16
Neuroinflammation and EIF2 Signaling Persist despite Antiretroviral Treatment in an hiPSC Tri-culture Model of HIV Infection16
Generation, genomic characterization, and differentiation of triploid human embryonic stem cells16
Human microglial cells as a therapeutic target in a neurodevelopmental disease model16
Satellite glial contact enhances differentiation and maturation of human iPSC-derived sensory neurons16
Derivation of transplantable human thyroid follicular epithelial cells from induced pluripotent stem cells16
Chitinase-like protein 3: A novel niche factor for mouse neural stem cells16
MAC-1 marks a quiescent and functionally superior HSC subset during regeneration16
Graft-derived horizontal cells contribute to host-graft synapses in degenerated retinas after retinal organoid transplantation16
A Chemically Defined Feeder-free System for the Establishment and Maintenance of the Human Naive Pluripotent State16
An efficient, non-viral arrayed CRISPR screening platform for iPSC-derived myeloid and microglia models16
GSK3α negatively regulates GSK3β by decreasing its protein levels and enzymatic activity in mouse embryonic stem cells16
Accelerated mitochondrial dynamics promote spermatogonial differentiation15
Seamless and non-destructive monitoring of extracellular microRNAs during cardiac differentiation from human pluripotent stem cells15
Development of a high-efficiency induction system for embryonic oral epithelium from human pluripotent stem cells15
Patient-derived parathyroid organoids as a tracer and drug-screening application model15
Self-assembling 3D vessel-on-chip model with hiPSC-derived astrocytes15
APOE4 impacts cortical neurodevelopment and alters network formation in human brain organoids15
ERRγ agonist under mechanical stretching manifests hypertrophic cardiomyopathy phenotypes of engineered cardiac tissue through maturation15
Small-molecule screen reveals pathways that regulate C4 secretion in stem cell-derived astrocytes15
A defined roadmap of radial glia and astrocyte differentiation from human pluripotent stem cells15
Subventricular zone adult mouse neural stem cells require insulin receptor for self-renewal15
Activation of canonical Wnt signaling is required for efficient direct reprogramming into human hepatic progenitor cells15
Pluripotent cell states and unexpected fates15
Retinoic acid signaling guides the efficiency of inner ear organoid-genesis and governs sensory-nonsensory fate specification15
Spatial transcriptomics reveals molecular cues underlying the site specificity of the adult mouse oral mucosa and its stem cell niches15
Neuroblast migration along cellular substrates in the developing porcine brain15
SARS-CoV-2 infection of airway organoids reveals conserved use of Tetraspanin-8 by Ancestral, Delta, and Omicron variants15
Sleep deprivation induces corneal epithelial progenitor cell over-expansion through disruption of redox homeostasis in the tear film14
Transcription factor co-expression mediates lineage priming for embryonic and extra-embryonic differentiation14
METTL3 uncouples chromatin accessibility from transcription during retinal development14
Human iPSC-derived photoreceptor transplantation in the cone dominant 13-lined ground squirrel14
Screening of factors inducing alveolar type 1 epithelial cells using human pluripotent stem cells14
PI3Kβ-regulated β-catenin mediates EZH2 removal from promoters controlling primed human ESC stemness and primitive streak gene expression14
A critical role of retinoic acid concentration for the induction of a fully human-like atrial action potential phenotype in hiPSC-CM14
DOT1L interaction partner AF10 controls patterning of H3K79 methylation and RNA polymerase II to maintain cell identity14
Unraveling the impact of ZZZ3 on the mTOR/ribosome pathway in human embryonic stem cells homeostasis14
Swift induction of human spinal lower motor neurons and robust ALS cell screening via single-cell imaging14
SALL3 mediates the loss of neuroectodermal differentiation potential in human embryonic stem cells with chromosome 18q loss14
mTORC2-mediated cell-cell interactions promote BMP4-induced WNT activation and mesoderm differentiation14
SnapShot: Reporting practices for publishing results with human PSCs and tissue stem cells14
Proteomics-based receptor-ligand matching enhances differentiation maturity of human-stem-cell-derived neurons14
Generation of a TPH2-EGFP reporter cell line for purification and monitoring of human serotonin neurons in vitro and in vivo14
Safe CNV removal is crucial for successful hESC-RPE transplantation in wet age-related macular degeneration14
Genetic variation modulates susceptibility to aberrant DNA hypomethylation and imprint deregulation in naive pluripotent stem cells14
Development of a platform to investigate long-term potentiation in human iPSC-derived neuronal networks13
Human macula formation involves two waves of retinoic acid suppression via CYP26A1 that modulate cell cycle exit and cone subtype specification13
Rigor and reproducibility in human brain organoid research: Where we are and where we need to go13
The urgent need for clear and concise regulations on exosome-based interventions13
AT7867 promotes pancreatic progenitor differentiation of human iPSCs13
CD37 regulates the self-renewal of leukemic stem cells via integrin-mediated signaling in acute myeloid leukemia13
Cellular immunotherapy for COVID-19-induced acute respiratory distress syndrome: Results of the CIRCA-19 phase 1 safety and phase 2 randomized controlled trials13
Exercise promotes the functional integration of human stem cell-derived neural grafts in a rodent model of Parkinson’s disease13
Human iPSC-derived salivary gland cell sheets integrate with injured glands to form glandular structures13
Advances in intravital imaging of adult neurogenesis in mice13
Cell size regulates human endoderm specification through actomyosin-dependent AMOT-YAP signaling13
Telmisartan is neuroprotective in a hiPSC-derived spinal microtissue model for C9orf72 ALS via inhibition of neuroinflammation13
Identification of unapproved orthopedic regenerative medicine: Usefulness of the Act on Safety of Regenerative Medicine13
Auxilin regulates intestinal stem cell proliferation through EGFR12
Clonal lineage tracing and transcriptomics of cortical progenitor populations reveal maintenance of differentiation potential12
An expedition in the jungle of pluripotent stem cells of non-human primates12
The SARS-CoV-2 receptor ACE2 is expressed in mouse pericytes but not endothelial cells: Implications for COVID-19 vascular research12
The rise of neural stem cells: From development to disease12
Dynamic governance: A new era for consent for stem cell research12
Survivors of polymicrobial sepsis are refractory to G-CSF-induced emergency myelopoiesis and hematopoietic stem and progenitor cell mobilization12
Aging disrupts gene expression timing during muscle regeneration12
Autism NPCs from both idiopathic and CNV 16p11.2 deletion patients exhibit dysregulation of proliferation and mitogenic responses12
High-content phenotyping of Parkinson's disease patient stem cell-derived midbrain dopaminergic neurons using machine learning classification12
Human neuronal networks on micro-electrode arrays as a tool to assess genotype-phenotype correlation in CACNA1A-related disorders12
History and current status of clinical studies using human pluripotent stem cells12
Comparative lipidomics of iPSC-derived microglia protocols reveal lipid droplet and immune differences mediated by media composition12
Whole-genome CRISPR screening identifies genetic manipulations to reduce immune rejection of stem cell-derived islets12
The role of UBE3A in the autism and epilepsy-related Dup15q syndrome using patient-derived, CRISPR-corrected neurons12
Mutations in FUS lead to synaptic dysregulation in ALS-iPSC derived neurons11
Engineering human pluripotent stem cell lines to evade xenogeneic transplantation barriers11
Advances and challenges in modeling Charcot-Marie-Tooth type 2A using iPSC-derived models11
Message from the editor-in-chief11
O-GlcNAcase regulates pluripotency states of human embryonic stem cells11
Establishing mouse forebrain organoids as models of intrinsic cortical network assembly11
A semi-automated MEA spike sorting method for high-throughput assessment of cultured neurons11
Dynamic spatiotemporal activation of a pervasive neurogenic competence in striatal astrocytes supports continuous neurogenesis following injury11
Heparan sulfate regulates the fate decisions of human pluripotent stem cells11
Prepubertal androgen signaling is required to establish male fat distribution11
Transitioning from human primordial germ cells to embryonic germ cells11
BMP4-SMAD1/5/9-RUNX2 pathway activation inhibits neurogenesis and oligodendrogenesis in Alzheimer’s patients’ iPSCs in senescence-related conditions11
Disruption of normal stem cell function and transmission of myelodysplastic syndrome by self-renewal of committed myeloid lineage cells11
Modeling diabetic alpha cell dysfunction using stem cell-derived alpha cells11
Validation of non-destructive morphology-based selection of cerebral cortical organoids by paired morphological and single-cell RNA-seq analyses11
Optimized prime editing of the Alzheimer’s disease-associated APOE4 mutation11
Dual CRISPR-Cas3 system for inducing multi-exon skipping in DMD patient-derived iPSCs11
Human pluripotent stem cell-derived macrophages host Mycobacterium abscessus infection11
Molecular pathology of Usher 1B patient-derived retinal organoids at single cell resolution11
Restoration of fertility in nonablated recipient mice after spermatogonial stem cell transplantation11
Polycomb repressive complex 2 regulates basal cell fate during adult olfactory neurogenesis11
Myosin VB is critical for progenitor cell identity and function in the intestine11
Iron accumulation induces oxidative stress, while depressing inflammatory polarization in human iPSC-derived microglia11
Integrin β1 activity controls colony morphology during human pluripotent stem cell state transitions10
Dual inhibition of MAPK and PI3K/AKT pathways enhances maturation of human iPSC-derived cardiomyocytes10
Long-term calcium imaging reveals functional development in hiPSC-derived cultures comparable to human but not rat primary cultures10
ERK phosphorylates ESRRB to regulate the self-renewal and differentiation of mouse embryonic stem cells10
Single-cell analysis of human fetal epicardium reveals its cellular composition and identifies CRIP1 as a modulator of EMT10
CFIm-mediated alternative polyadenylation safeguards the development of mammalian pre-implantation embryos10
Stress-induced reversible cell-cycle arrest requires PRC2/PRC1-mediated control of mitophagy in Drosophila germline stem cells and human iPSCs10
Physiological calcium combined with electrical pacing accelerates maturation of human engineered heart tissue10
Notch1 signaling in keratocytes maintains corneal transparency by suppressing VEGF expression10
Stem cell-based embryo models: The 2021 ISSCR stem cell guidelines revisited10
Panning for gold: Purifying mesencephalic dopaminergic progenitors differentiated from human pluripotent stem cells10
Acute E2/P4 loss compromises the biology and function of neurogenic niches during a vulnerable female aging period10
Dose-resolved control of somatic reprogramming by Rora10
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