OOIR: Observatory of International Research

Papers

(The TQCC of Applications in Plant Sciences is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-08-01 to 2026-08-01.)

Article	Citations
	160
	59
A unified framework to investigate and interpret hybrid and allopolyploid biodiversity across biological scales	44
Astragalean819: An Astragalean clade‐specific bait set to resolve phylogenetic relationships in Astragalus	43
Making sense of complexity: Advances in bioinformatics for plant biology	40
Correction to Welcome to the big leaves: Best practices for improving genome annotation in non‐model plant genomes	33
Optimizing efficient PCR‐amplifiable DNA extraction from herbarium specimens	30
	29
Use of electrolyte leakage to assess floral damage after freezing	29
mvh: An R tool to assemble and organize virtual herbaria from openly available specimen images	26
Garryanalyzer: A morphometric workflow and open‐source ImageJ plug‐in for quantitative morphological analysis of Pacific Northwest Quercus leaves	25
Conservation Action Tracker: A tool to identify and monitor conservation actions for tree species	21
Charting the course for new discoveries in polyploid lineages	21
Correction to “A comparison of freezer‐stored DNA and herbarium tissue samples for chloroplast assembly and genome skimming”	20
Building capacity in the conservation of exceptional plant species	19
A practical and easy‐to‐scale protocol for removing chlorophylls from leaf extracts	18
The challenges of growing orchids from seeds for conservation: An assessment of asymbiotic techniques	17
Leveraging target enrichment and genome skimming (Hyb‐Seq) of herbarium collections to unlock timber DNA barcoding	17
Supporting long‐term sustainability of ex situ collections using a pedigree‐based population management approach	15
Applying a modified metabarcoding approach for the sequencing of macrofungal specimens from fungarium collections	15
SkelPy: A graphic user interface–based approach for skeletonizing fungal networks	14
	14
Enhancing plant morphological trait identification in herbarium collections through deep learning–based segmentation	13
Experimental methods for wind tunnel studies of seed dispersal by wind	13
Acknowledgment of Reviewers	13

Data‐centric species distribution modeling: Impacts of modeler decisions in a case study of invasive European frog‐bit	12
Expression‐based machine learning models for predicting plant tissue identity	12
A machine learning algorithm for the automatic classification of Phytophthora infestans genotypes into clonal lineages	12
An automated pipeline for supervised classification of petal color from citizen science photographs	12
Semi‐automated assessment for NatureServe subnational conservation status ranks for state floras	11
Non‐model plants: Challenges and solutions	11
Fully automatic extraction of morphological traits from the web: Utopia or reality?	11
	11
	11
Integrating machine learning, deep learning, and image analysis for seed species classification	11
Issue Information	10
Advances in analyzing and engineering plant metabolic diversity	10
A novel combination of in vitro propagation and hydroponic culture for hybrid cacao (Theobroma cacao) plants	10
A low‐cost protocol for the optical method of vulnerability curves to calculate P₅₀	9
Modified CTAB protocols for high‐molecular‐weight DNA extractions from ferns	9
Are they two seeds in a pod? Comparing seed rain recovery in grasslands using artificial grass carpets versus sticky traps	9
DNA release from plant tissue using focused ultrasound extraction (FUSE)	9
	9
Just add water: A simple floral bud injection method for stable Agrobacterium ‐mediated transformation in two ecotypes of Mimulus	9
Review of the cellulose acetate peel method and the physical and digital curation of coal balls	8
	8
Analysis of plant metabolomics data using identification‐free approaches	7
Issue Information	7
Multiple Leaf Sample Extraction System (MuLES): A tool to improve automated morphometric leaf studies	7
Detecting introgression from phylogenetic invariant site patterns using machine learning	7
Chromosome‐scale reference genome of Pectocarya recurvata , the species with the smallest reported genome size in Boraginaceae	7
Ethanol preservation and pretreatments facilitate quality DNA extractions in recalcitrant plant species	7
HapAsmbl: A reference‐aided pipeline for assembling haplotypes in Nanopore amplicon sequence data of polymorphic populations	7
Infrared spectroscopy for ploidy estimation: An example in two species of Veronica using fresh and herbarium specimens	7
An open‐source LED lamp for use with the LI‐6800 photosynthesis system	7
Hijacking a rapid and scalable metagenomic method reveals subgenome dynamics and evolution in polyploid plants	6
DNA assays for genetic discrimination of three Phragmites australis subspecies in the United States	6
A new spin on chemotaxonomy: Using non‐proteogenic amino acids as a test case	6
A comparison of freezer‐stored DNA and herbarium tissue samples for chloroplast assembly and genome skimming	6
A simple and affordable protocol to assess censer seed dispersal: First confirmation of the mechanism in the genus Solanum	6
PlantSAM: An object detection‐driven segmentation pipeline for herbarium specimens	6
Applying interpretable machine learning to assess intraspecific trait divergence under landscape‐scale population differentiation	6
InDelGT: An integrated pipeline for extracting indel genotypes for genetic mapping in a hybrid population using next‐generation sequencing data	6
Using large language models to extract plant functional traits from unstructured text	6
Animal‐mediated seed dispersal: A review of study methods	6
	6
Optogenetic control of transgene expression in Marchantia polymorpha	6