OOIR: Observatory of International Research

Papers

(The H4-Index of G3-Genes Genomes Genetics is 30. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-03-01 to 2024-03-01.)

Article	Citations
BlobToolKit – Interactive Quality Assessment of Genome Assemblies	849
AlphaSimR: an R package for breeding program simulations	97
CeMbio - TheCaenorhabditis elegansMicrobiome Resource	85
LongQC: A Quality Control Tool for Third Generation Sequencing Long Read Data	76
Polygenic Scores for Height in Admixed Populations	74
Measuring Genome Sizes Using Read-Depth, k-mers, and Flow Cytometry: Methodological Comparisons in Beetles (Coleoptera)	72
A Reference Genome Sequence for Giant Sequoia	66
Genomic Prediction Enhanced Sparse Testing for Multi-environment Trials	65
Multi-trait Genomic Prediction Model Increased the Predictive Ability for Agronomic and Malting Quality Traits in Barley (Hordeum vulgare L.)	63
A Genome Assembly of the Barley ‘Transformation Reference’ Cultivar Golden Promise	57
Revisiting the genome-wide significance threshold for common variant GWAS	53
The importance of dominance and genotype-by-environment interactions on grain yield variation in a large-scale public cooperative maize experiment	51
EnvRtype: a software to interplay enviromics and quantitative genomics in agriculture	50
Cas9-Mediated Gene-Editing in the Malaria Mosquito Anopheles stephensi by ReMOT Control	49
Visualizing population structure with variational autoencoders	47
A Comprehensive, Flexible Collection of SARS-CoV-2 Coding Regions	44
A telomere-to-telomere assembly of Oscheius tipulae and the evolution of rhabditid nematode chromosomes	42
Chromonomer: A Tool Set for Repairing and Enhancing Assembled Genomes Through Integration of Genetic Maps and Conserved Synteny	41
Solyntus, the New Highly Contiguous Reference Genome for Potato (Solanum tuberosum)	41
MoBPS - Modular Breeding Program Simulator	40
A long reads-based de-novo assembly of the genome of the Arlee homozygous line reveals chromosomal rearrangements in rainbow trout	38
Meta-analysis of Diets Used inDrosophilaMicrobiome Research and Introduction of theDrosophilaDietary Composition Calculator (DDCC)	36
A high-quality, chromosome-level genome assembly of the Black Soldier Fly (Hermetia illucens L.)	35
Reference Genome for the Highly Transformable Setaria viridis ME034V	34
Diploid chromosome-scale assembly of theMuscadinia rotundifoliagenome supports chromosome fusion and disease resistance gene expansion duringVitisandMuscadiniadivergence	33

Assessing Diversity in theCamelinaGenus Provides Insights into the Genome Structure ofCamelina sativa	32
The Gossypium longicalyx Genome as a Resource for Cotton Breeding and Evolution	32
The Gene scb-1 Underlies Variation in Caenorhabditis elegans Chemotherapeutic Responses	31
Insights from the first genome assembly of Onion (Allium cepa)	30
A homing suppression gene drive with multiplexed gRNAs maintains high drive conversion efficiency and avoids functional resistance alleles	30
Improved contiguity of the threespine stickleback genome using long-read sequencing	30
Genetic Underpinnings of Host Manipulation by Ophiocordyceps as Revealed by Comparative Transcriptomics	30
Evaluation of STAR and Kallisto on Single Cell RNA-Seq Data Alignment	30