Biomedical Optics Express

Article	Citations
Optical Characterization of a Laser Speckle Contrast Imaging System for Intraoperative Blood Flow Monitoring	94
Direct blood flow velocity measurements of zebrafish cerebral vessels with a dual-mode light-sheet microscope	84
Method for nanoparticles uptake evaluation based on double labeled fluorescent cells scanned in enhanced darkfield microscopy	79
Large diameter electrically tunable lens for ophthalmic distance accommodation	68
High-throughput and high-accuracy diagnosis of multiple myeloma with multi-object detection	68
Semi-supervised 3D retinal fluid segmentation via correlation mutual learning with global reasoning attention	60
Optimization of femtosecond laser spot coverage: analytical modeling of spatial frequencies, anisotropy, and saturation boundaries	55
Near-infrared, wavelength, and illumination scanning holographic tomography	53
Functionalized optical fiber ball-shaped biosensor for label-free, low-limit detection of IL-8 protein	51
Image formation theory of optical coherence tomography with optical aberrations and its application to computational aberration correction	49
Optical tomography in a single camera frame using fringe-encoded deep-learning full-field OCT	45
Evaluating the performance of OCT in assessing static and potential dynamic properties of the retinal ganglion cells and nerve fiber bundles in the living mouse eye	44
Aberration compensation in Doppler holography of the human eye fundus by subaperture signal correlation	43
Unpaired intra-operative OCT (iOCT) video super-resolution with contrastive learning: erratum	43
Reconfigurable hardware-accelerated, multi-channel, adaptive temperature control platform of VCSELs for high-density fNIRS/DOT	42
Tandem aberration correction optics (TACO) in wide-field structured illumination microscopy	42
Modelling red blood cell optical trapping by machine learning improved geometrical optics calculations	41
Systematic meta-analysis of computer-aided detection to detect early esophageal cancer using hyperspectral imaging	41
Multimodal analysis of traction forces and the temperature dynamics of living cells with a diamond-embedded substrate	40
Enhanced functionalities of immune cells separated by a microfluidic lattice: assessment based on holotomography	38
Label-free multimodal imaging with simultaneous two-photon and three-photon microscopy and kernel-based nonlinear scaling denoising	36
Blood metal analysis of plasmas from donors with and without SARS-CoV-2 using laser-induced breakdown spectroscopy and logistic regression	34
Noncontact longitudinal shear wave imaging for the evaluation of heterogeneous porcine brain biomechanical properties using optical coherence elastography	34
Raman spectromics method for fast and label-free genotype screening	34
Three-dimensional cerebral vasculature topological parameter extraction of transgenic zebrafish embryos with a filling-enhancement deep learning network	33

Fast and customizable image formation model for optical coherence tomography	33
ESDiff: a joint model for low-quality retinal image enhancement and vessel segmentation using a diffusion model	33
Recording dynamic facial micro-expressions with a multi-focus camera array	32
Scaling method for efficient Monte Carlo simulation of fluorescence spectra from multi-layered turbid media with oblique illumination and collection geometry	32
Rapid 3D isotropic imaging of whole organ with double-ring light-sheet microscopy and self-learning side-lobe elimination	32
Optical memory effect of excised cataractous human crystalline lenses	32
Thermal imaging-based core peripheral temperature difference measurement for neonatal monitoring in the NICU	30
High-speed, wide-field, fiber-based PS-OCT system with real-time surface Stokes feedback for circular input polarization	30
Hybrid deep learning and optimal graph search method for optical coherence tomography layer segmentation in diseases affecting the optic nerve	30
Serum-based Raman spectroscopic diagnosis of blast-induced brain injury in a rat model	29
Physiological chromatic model eyes for IOL characterization	29
Longitudinal tracking of perfluorooctanoic acid exposure on mammary epithelial cell spheroids by dynamic optical coherence tomography	29
Portable in vivo confocal ophthalmoscope for non-contact imaging of the cornea and anterior segment of the eye	28
Three-dimensional mechanical characterization of murine skeletal muscle using quantitative micro-elastography	28
Boosting few-shot confocal endomicroscopy image recognition with feature-level MixSiam	28
3D stimulated Raman spectral imaging of water dynamics associated with pectin-glycocalyceal entanglement	28
ENDOSWIR clinical proof of concept: a reflectance-based multispectral imaging device for head and neck cancer detection	27
Dynamic Light Scattering in Biomedical Applications: feature issue introduction	27
Real-time closed-loop tissue-specific laser osteotomy using deep-learning-assisted optical coherence tomography	27
Acoustomotive diffuse correlation spectroscopy for sensing mechanical stiffness in tissue-mimicking phantoms	27
Automatic search for photoacoustic marker using automated transrectal ultrasound	26
Relevance and utility of the in-vivo and ex-vivo optical properties of the skin reported in the literature: a review [Invited]	26
Corneal endothelium assessment in specular microscopy images with Fuchs’ dystrophy via deep regression of signed distance maps	26
fNIRS reveals comparable reductions in cortical hyperconnectivity following once-daily and twice-daily rTMS in poststroke aphasia	26
Multiscale label-free imaging of myelin in human brain tissue with polarization-sensitive optical coherence tomography and birefringence microscopy	26
Clinical Feasibility of Low-Magnification Fluorescence Imaging for Breast Cancer Margin Detection Using Texture Analysis and Deep Learning	25
Confocal reflectance microscopy for mapping collagen fiber organization in the vitreous gel of the eye	25
Rapid and cost-effective screening of therapeutic targets for isoquercitrin in insulin resistance using virtual methods and fiber SPR biosensing	25
Comparison of fluorescence lifetime and multispectral imaging for quantitative multiplexing in biological tissue: erratum	25
Evaluation of a liquid membrane-based tunable lens and a solid-state LIDAR camera feedback system for presbyopia	24
Three-dimensional image-guided topical photodynamic therapy system with light dosimetry dynamic planning and monitoring	24
Adaptive optics scanning laser ophthalmoscopy and optical coherence tomography (AO-SLO-OCT) system for in vivo mouse retina imaging	24
Bessel beam side lobe suppression via non-degenerate two-photon excitation	24
Deep learning segmentation of the tear fluid reservoir under the sclera lens in optical coherence tomography images	23
Speckle tweezers near water-oil and water-air interfaces	23
Deep learning and sub-band fluorescence imaging-based method for caries and calculus diagnosis embeddable on different smartphones	23
High-speed, long-range and wide-field OCT for in vivo 3D imaging of the oral cavity achieved by a 600 kHz swept source laser	23
Peripheral detection acuity for interference fringes and screen-based Gabor gratings	23
Recovering fetal signals transabdominally through interferometric near-infrared spectroscopy (iNIRS)	23
1064 nm-absorbing semiconducting polymer nanoparticles for multimodal photoacoustic and fluorescence imaging	22
Mueller polarimetric imaging as a tool for detecting the effect of non-thermal plasma treatment on the skin	22
Four-color fluorescence cross-correlation spectroscopy with one laser and one camera	22
Air-pulse optical coherence elastography: how excitation angle affects mechanical wave propagation	22
Deep learning for the detection of colon polyps with malignant potential: ex vivo classification using feature-enhanced optical coherence tomography (OCT) images	22
Cardiac pulse transfer along the cerebral microvascular network captured by laser speckle contrast imaging	22
Motion-less depth-selective optogenetic probe using tapered fiber and an electrically tuneable liquid crystal steering element	22
Spatiotemporal defocus sensitivity function of the human visual system	22
Attenuation coefficient as a tool to detect changes in the white matter of the rat brain caused by different types of gliomas and irradiation	21
Magnetic resonance and X-ray contrast agents in the optical clearing of dermis – insights from ex vivo confocal Raman micro-spectroscopy	21
Light scattering in human dentin	21

In-situ, real-time monitoring of thermo-mechanical properties of biological tissues undergoing laser heating and ablation	21
Probabilistic volumetric speckle suppression in OCT using deep learning	21
Two-dimensional nonlinear structured illumination microscopy with rsEGFP2	21
Analysis of the key signaling pathway of baicalin that induces autophagy in papillary thyroid cancer via an optical resonator	21
Long-term imaging of three-dimensional hyphal development using the ePetri dish	20
Enabling real-time reconstruction for large field-of-view single-molecule localization microscopy using discrete field-dependent point-spread function	20
Mask-guided network for finger vein feature extraction and biometric identification	20
ISOSNet: a unified framework for cone photoreceptor detection and inner segment and outer segment length measurement from AO-OCT B-scans	20
Studying fluctuating trajectories of optically confined passive tracers inside cells provides familiar active forces	20
Primary assessment of medicines for expected migrastatic potential with holographic incoherent quantitative phase imaging	20
Image stitching algorithm for super-resolution localization microscopy combined with fluorescence noise prior	20
Seedling fibroid characterization using optical coherence tomography	20
Microfluidic point-of-care testing device for multiplexed detection of liver function blood markers	20
Comprehensive advancement in endoscopy: optical design, algorithm enhancement, and clinical validation for merged WLI and CBI imaging	20
Deep-learning-based automated measurement of outer retinal layer thickness for use in the assessment of age-related macular degeneration, applicable to both swept-source and spectral-domain OCT imagin	20
Single-shot quantitative phase microscopy: a multi-functional tool for cell analysis	20
Localized transverse flow measurement with dynamic light scattering line-scan OCT	20
Joint estimation of point spread function and molecule positions in SMLM informed from multiple planes	20
Metabolic imaging of Fragilariopsis cylindrus in polar night conditions using full-field optical transmission tomography (FFOTT)	20
Fast volumetric multifocus structured illumination microscopy of subcellular dynamics in living cells	20
Optimal calibration of optical tweezers with arbitrary integration time and sampling frequencies: a general framework [Invited]	20
Compact and low-cost deep-ultraviolet microscope system for label-free molecular imaging and point-of-care hematological analysis	20
Polarization effects on the fluorescence emission of zebrafish neurons using light-sheet microscopy	19
Real-time data processing in colorimetry camera-based single-molecule localization microscopy via CPU-GPU-FPGA heterogeneous computation	19
AI-aided segmentation of four types of drusen in volumetric OCT	19
Evaluation of Slowfade Diamond as a buffer for STORM microscopy	19
Plasmon enhanced luminescence of Tb/Eu co-doped film by Au NRs-PVA nanocomposite film	19
Multiscale imaging of corneal endothelium damage and Rho-kinase inhibitor application in mouse models of acute ocular hypertension	19
Recent breakthroughs in digital holography, 2D/3D imaging, and holographic optical elements: introduction	19
MXene-based SERS spectroscopic analysis of exosomes for lung cancer differential diagnosis with deep learning	19
Ultra-low-cost and high-fidelity NIR-II confocal laser scanning microscope with Bessel beam excitation and SiPM detection	19
Structural changes in the crystalline lens as a function of the postmortem interval assessed with two-photon imaging microscopy	19
Blood pressure estimation by spatial pulse-wave dynamics in a facial video	19
3D transformer-enhanced multi-scale global co-attention network for precise diabetic macular edema segmentation in OCT volumes	19
Non-contact confocal calcium imaging of in vivo murine corneal nerves	19
In vivo ultrasound modulated optical tomography with a persistent spectral hole burning filter	19
Axial scanning of dual focus to improve light sheet microscopy	19
A machine learning framework for the quantification of experimental uveitis in murine OCT	19
Diffuse reflectance spectroscopy sensor to differentiate between glial tumor and healthy brain tissue: a proof-of-concept study	18
Multicolor two-photon light-patterning microscope exploiting the spatio-temporal properties of a fiber bundle	18
MEMS-based large-field-of-view optical coherence tomography endoscopy for gastric ulcer imaging in mice	18
Chronic two-photon microscopy reveals neuronal activity patterns in the cerebral cortex of an Alzheimer’s disease mouse model	18
Double Stokes polarimetry of birefringent structures	18
Hyperspectral coherent anti-Stokes Raman scattering volumetric projection microscopy for assessing drug–cell interaction	18
Multi-modality imaging technologies and machine learning for non-invasive, precise assessment of rabbit endometrium	18
Noninvasive estimation of superficial layer thickness using multi-channel diffuse correlation spectroscopy	18
Second harmonic generation of myofibrils exhibits a polarization-resolved “gradient” effect	18
Rapid spectral shaping for time domain and swept source full field OCT	18
Development of a multiparameter phantom system for multispectral imaging	18
Portable optical fiber biosensors integrated with smartphone: technologies, applications, and challenges [Invited]	18
Biocompatible spider silk-based metal-dielectric fiber optic sugar sensor	18
In vivo endoscopic optical coherence elastography based on a miniature probe	18
Effects of tactile feedback in post-stroke hand rehabilitation on functional connectivity and cortical activation: an fNIRS study	18
Sinogram to image: direct reconstruction of photoacoustic tomography image using a hybrid deep learning approach	18
Adaptive optics in an oblique plane microscope	18
Out-of-focus signal rejection for in vivo pO 2 measurements using two-photon phosphorescence lifetime	18
Application of quantum imaging in biology	18
Method to improve the localization accuracy and contrast recovery of lesions in separately acquired X-ray and diffuse optical tomographic breast imaging	17
DIRECT, a low-cost system for high-speed, low-noise imaging of fluorescent bio-samples	17
Two-lens telecentric model eyes for image distortion measurement in adaptive optics ophthalmoscopes	17
Wavelength-tunable depletion expands fluorophore compatibility in two-photon STED nanoscopy	17
Asymmetric parameter enhancement in the split-ring cavity array for virus-like particle sensing	17
Introduction to the Biophotonics Congress 2024 feature issue	17
Study on the detection method of biological characteristics of hepatoma cells based on terahertz time-domain spectroscopy	17
Nanozyme-active Au@Pt NRs array SERS platform based on a recognition competition strategy for convenient and ultrasensitive detection of miR-106a-5p associated with cerebral infarction	17
Generalized plaque digitization framework for multi-dimensional mesoscopic images	17
CGAN-rIRN: a data-augmented deep learning approach to accurate classification of mental tasks for a fNIRS-based brain-computer interface	17
FPM2Stain Net: physics-guided super-resolution and multi-modal virtual staining for digital histopathology	17
First-order field autocorrelation function analysis-based dynamic OCT for tissue viability assessment	17
Ultrafast laser bone ablation towards high surgical speeds and clinically relevant operation times for spine surgeries	17
Fabrication and performance evaluation of a design for an extended depth-of-focus intraocular lens based on an improved sinusoidal profile	17
Spatial-temporal correlations in the speckle pattern for the characterization of cellular motion within a 3D object	16
Pressure stimulus study on acupuncture points with multi-channel multimode-fiber diffuse speckle contrast analysis (MMF-DSCA)	16
Sub-50-femtosecond gain-managed amplified pulses enhance nonlinear ablation efficiency	16
Super-resolution imaging using fluorescence-lifetime emission-difference	16
Multimodal illumination platform for 3D single-molecule super-resolution imaging throughout mammalian cells	16
Perceptual cost and benefit of presbyopia-correcting intraocular lenses: effect of energy balance, addition, and adaptation	16
Clarification on the understanding of contrast theory in relation to the article “ON and OFF receptive field processing in the presence of optical scattering”: comment	16
Dynamic optical coherence tomography for cell analysis [Invited]	16
Motion-tracking Brillouin microscopy for in-vivo corneal biomechanics mapping	16

Compression OCT-elastography combined with speckle-contrast analysis as an approach to the morphological assessment of breast cancer tissue	16
Assessing depth sensitivity in laser interferometry speckle visibility spectroscopy (iSVS) through source-to-detector distance variation and cerebral blood flow monitoring in humans and rabbits	16
Introduction to the feature issue: Advances in Optical Biosensors for Biomedical Applications	16
Chirp excitation for natural frequency optical coherence elastography	16
In situ measurement of the stiffness increase in the posterior sclera after UV-riboflavin crosslinking by optical coherence elastography	16
Changes to the shape, orientation and packing of red cells as a function of retinal capillary size	16
Retinal reconstruction from peripheral biometry	16
Hyper-brain independent component analysis (HB-ICA): an approach for detecting inter-brain networks from fNIRS-hyperscanning data	16
Single-input polarization-sensitive optical coherence tomography through a catheter	16
Realtime and noninvasive assessment of endotracheal tube displacement using near-infrared and visible cameras	16
Ultra-fast line-field swept source scanning optical coherence elastography	16
Weakly supervised identification of microscopic human breast cancer-related optical signatures from normal-appearing breast tissue	15
Thermal lensing effects in two-photon light-sheet microscopy	15
Diffuse correlation tomography: a technique to characterize tissue blood flow abnormalities in benign and malignant breast lesions	15
PSB-DSN: a two-stage unsupervised denoising enhancement network for OCT images based on pixel shuffle and blind spot masking	15
Application of fluorescence lifetime imaging microscopy to monitor glucose metabolism in pancreatic islets in vivo	15
Automated lipid detection in spectroscopic optical coherence tomography using a weakly supervised deep learning network	15
On the physiological processes underlying optoretinography [Invited]	15
Embedded CPU-GPU pupil tracking	15
Three-dimensional dynamic optical coherence tomography for breast tumor margin assessment	15
Non-invasive glucose extraction by a single polarization rotator system in patients with diabetes: erratum	15
Towards point-of-care tests for protein detection at the attomolar level via disposable pollen-based nanoplasmonic probes grafted with polymer-based receptors	15
Dome-APIC illumination design for high space-bandwidth product analytic imaging	15
Ring-segment piezopolymer sensor optimized for cylindrical-wave detection in optical-resolution optoacoustic angiography with extended imaging depth	15
Portable, smartphone-linked, and miniaturized photonic resonator absorption microscope (PRAM Mini) for point-of-care diagnostics	15
Validation of an automated method for studying retinal capillary blood flow	15
Rapid clearing and imaging of Mohs and melanoma surgical margins using a low-cost tissue processor	15
Orbital angular momentum mode fiber force sensing technology based on intensity interrogation	15
Identification of late-life depression and mild cognitive impairment via serum surface-enhanced Raman spectroscopy and multivariate statistical analysis	15
Towards noninvasive white blood cell count	15
Accelerating whole-sample polarization-resolved second harmonic generation imaging in mammary gland tissue via generative adversarial networks	15
Dynamic multimode fiber specklegram sensor with automated training data generation for bed-exit prediction	15
Single-shot, depth-encoded multiplexed OCT for multi-spot tracking of induced transient corneal dynamics	15
Dual-channel air-pulse optical coherence elastography for frequency-response analysis	15
Biometry study of foveal isoplanatic patch variation for adaptive optics retinal imaging	15
Segmentation of anatomical layers and imaging artifacts in intravascular polarization sensitive optical coherence tomography using attending physician and boundary cardinality losses	15
Imaging and component analysis of pumpkin stem tissue with simultaneous SF-CARS and TPEF microscopy	15
Research on a rapid and accurate diagnosis platform for liver fibrosis based on machine learning-assisted SERS technology	15
Post-operative monitoring of tissue perfusion in murine skin flaps using enhanced thermal imaging	15
Neural-network based high-speed volumetric dynamic optical coherence tomography	15
Introduction to the Optics and the Brain 2023 feature issue	15
Experimental and modeling analysis of lenses with concentric cylindrical annular refractive elements: impact on peripheral imaging	14
Retinal optical coherence tomography image analysis by a restricted Boltzmann machine	14
Automated animal gimbal steering for retinal imaging and stimulation	14
Design and characterization of a time-domain optical tomography platform for mesoscopic lifetime imaging	14
Cost-effective Mueller matrix microscopy for label-free differentiation of melanoma from normal skin and common skin cancer types	14
Review of shortwave infrared imaging and spectroscopy in tissue [Invited]	14
Quantifying UV-induced photodamage for longitudinal live-cell imaging applications of deep-UV microscopy	14
Dynamic-OCT simulation framework based on mathematical models of intratissue dynamics, image formation, and measurement noise	14
MulitDeepsurv: Survival analysis of gastric cancer based on deep learning multimodal fusion models	14
Method to determine the centration of a lenticule of tissue extracted from a cornea	14
Biological Cells as Natural Biophotonic Devices: Fundamental and Applications–introduction to the feature issue	14
Deep convolutional neural networks-based scatterer density and resolution estimators in optical coherence tomography: erratum	14
Application of gradient-consensus Richardson–Lucy deconvolution to noisy undersampled brightfield microscopy data	14
Non-contact measurement of neck pulses achieved by imaging micro-motions in the neck skin	14
qtOCT: quantitative transmission optical coherence tomography	14
Dynamic full-field swept-source optical coherence tomography for high-resolution, long-depth, and intratissue-activity imaging	14
Assessing preterm risk via label-free, multiparametric imaging of collagen fiber remodeling in the cervix	14
LED array microscopy system correction method with comprehensive error parameters optimized by phase smoothing criterion	14
Integrated fixation and stimulus channel for adaptive optics ophthalmoscopy	14
Plug-and-play DPC-based quantitative phase microscope	14
Laser pulse train parameters determine the brightness of a two-photon stimulus	14
Chromatic cues for the sign of defocus in the peripheral retina	14
Interferometric image denoising network SEVReNet	14
Wavenumber-space wavefront sensorless adaptive-optics for optical coherence tomography: publisher’s note	14
Voltage imaging with periodic structured illumination	14
Performance of focus-tunable presbyopia correction lenses operated using gaze-tracking and LIDAR	14
Label-free candidate dOCM biomarkers associated with blastocyst quality using total cell count as a proxy	14
Multi-kernel driven 3D convolutional neural network for automated detection of lung nodules in chest CT scans	14
Picosecond laser capture microdissection based on edge catapulting combined with dielectrophoretic force	14
Alternating projection combined with fast gradient projection (FGP-AP) method for intensity-only measurement optical diffraction tomography in LED array microscopy	14
Challenging the skin pigmentation bias in tissue oximetry via time-domain near-infrared spectroscopy	14
Three-dimensional oxygen concentration monitoring in hydrogels using low-cost phosphorescence lifetime imaging for tissue engineering	14
Sodium alginate-based tissue-mimicking phantom with tunable optical properties for laser thermotherapy	14
Compact breast shape acquisition system for improving diffuse optical tomography image reconstructions	14
Silver mean sequence in extended depth of focus intraocular lenses: a comparative study of kinoform and stepwise designs	13
Diffuse reflectance spectroscopy for accurate margin assessment in breast-conserving surgeries: importance of an optimal number of fibers	13
Comparative study of OCTA algorithms with a high-sensitivity multi-contrast Jones matrix OCT system for human skin imaging	13
Quantification of oxidized and reduced cytochrome-c-oxidase by combining discrete-wavelength time-resolved and broadband continuous-wave near-infrared spectroscopy	13
Entropy and distance-guided super self-ensembling for optic disc and cup segmentation	13
Introduction to the feature Issue “Improving Vision through Intraocular Lenses”: a tribute to Jim Schwiegerling	13
Relative peripheral refraction with accommodation in 6- to 11-year-olds: baseline findings from the Stockholm Myopia Study	13
Automated fast label-free quantification of cardiomyocyte dynamics with raw holograms for cardiotoxicity screening	13
Analysis of SARS-CoV-2 spike RBD binding to ACE2 and its inhibition by fungal cohaerin C using surface enhanced Raman spectroscopy	13
Laser speckle simulation tool based on stochastic differential equations for bio imaging applications	13
ConNeCT: weakly supervised corneal confocal microscopy image inpainting network based on a diffusion model	13
Microfluidics-based automatic immunofluorescence staining for single-molecule localization microscopy	13
On the utility of virtual staining for downstream applications as it relates to task network capacity	13
Probing diffusive media through speckle differencing	13
Soft elastomeric optical fibers for oxygen change measurements of blood and living tissues: a thermoplastic polyurethane assessment	13
All-fiber passively Q-switched Tm-doped laser with a mode field area mismatched Tm-doped saturable absorber	13
Anterior and posterior imaging with hyperparallel OCT	13
Evaluating differences in optical properties of indolent and aggressive murine breast tumors using quantitative diffuse reflectance spectroscopy	13
Proof of concept validation of bioresorbable optical fibers for diffuse correlation spectroscopy	13
NIR autofluorescence allows for pituitary gland detection during surgery: evidence from microscopic studies and in vivo measurements	13