Biomedical Optics Express

Article	Citations
Multimodal analysis of traction forces and the temperature dynamics of living cells with a diamond-embedded substrate	106
Machine learning-based rapid diagnosis of human borderline ovarian cancer on second-harmonic generation images	61
Dynamic Light Scattering in Biomedical Applications: feature issue introduction	59
Blood metal analysis of plasmas from donors with and without SARS-CoV-2 using laser-induced breakdown spectroscopy and logistic regression	55
Depth-resolved extraction of optical attenuation for glaucoma assessment in clinical settings: a pilot study	54
Parametric comparison between sparsity-based and deep learning-based image reconstruction of super-resolution fluorescence microscopy	52
Hybrid deep learning and optimal graph search method for optical coherence tomography layer segmentation in diseases affecting the optic nerve	50
Evaluating the performance of OCT in assessing static and potential dynamic properties of the retinal ganglion cells and nerve fiber bundles in the living mouse eye	50
Noninvasive and early diagnosis of acquired brain injury using fluorescence imaging in the NIR-II window	48
Quantitative Jones matrix imaging using vectorial Fourier ptychography	47
Prediction of the postoperative prognosis in patients with non-muscle-invasive bladder cancer based on preoperative serum surface-enhanced Raman spectroscopy	44
Acoustomotive diffuse correlation spectroscopy for sensing mechanical stiffness in tissue-mimicking phantoms	43
Boosting few-shot confocal endomicroscopy image recognition with feature-level MixSiam	41
Fast and customizable image formation model for optical coherence tomography	40
Three-dimensional mechanical characterization of murine skeletal muscle using quantitative micro-elastography	39
3D stimulated Raman spectral imaging of water dynamics associated with pectin-glycocalyceal entanglement	38
Three-dimensional cerebral vasculature topological parameter extraction of transgenic zebrafish embryos with a filling-enhancement deep learning network	38
Real-time closed-loop tissue-specific laser osteotomy using deep-learning-assisted optical coherence tomography	36
Relevance and utility of the in-vivo and ex-vivo optical properties of the skin reported in the literature: a review [Invited]	35
Rapid 3D isotropic imaging of whole organ with double-ring light-sheet microscopy and self-learning side-lobe elimination	34
Modelling red blood cell optical trapping by machine learning improved geometrical optics calculations	34
Optical tomography in a single camera frame using fringe-encoded deep-learning full-field OCT	33
Raman spectromics method for fast and label-free genotype screening	33
Serum-based Raman spectroscopic diagnosis of blast-induced brain injury in a rat model	32
Enhanced functionalities of immune cells separated by a microfluidic lattice: assessment based on holotomography	32

Label-free multimodal imaging with simultaneous two-photon and three-photon microscopy and kernel-based nonlinear scaling denoising	32
Aberration compensation in Doppler holography of the human eye fundus by subaperture signal correlation	31
Longitudinal tracking of perfluorooctanoic acid exposure on mammary epithelial cell spheroids by dynamic optical coherence tomography	31
Label free optical transmission tomography for biosystems: intracellular structures and dynamics	31
Tailored approach to study Legionella infection using a lattice light sheet microscope (LLSM)	31
Functionalized optical fiber ball-shaped biosensor for label-free, low-limit detection of IL-8 protein	30
Optical memory effect of excised cataractous human crystalline lenses	30
Deep learning-based autofocus method enhances image quality in light-sheet fluorescence microscopy: publisher’s note	30
In-vitro study on the identification of gastrointestinal stromal tumor tissues using laser-induced breakdown spectroscopy with chemometric methods	29
Tandem aberration correction optics (TACO) in wide-field structured illumination microscopy	29
Thermal imaging-based core peripheral temperature difference measurement for neonatal monitoring in the NICU	29
ESDiff: a joint model for low-quality retinal image enhancement and vessel segmentation using a diffusion model	28
High-throughput and high-accuracy diagnosis of multiple myeloma with multi-object detection	28
Recording dynamic facial micro-expressions with a multi-focus camera array	28
Semi-supervised 3D retinal fluid segmentation via correlation mutual learning with global reasoning attention	28
Corneal endothelium assessment in specular microscopy images with Fuchs’ dystrophy via deep regression of signed distance maps	28
Unpaired intra-operative OCT (iOCT) video super-resolution with contrastive learning: erratum	28
Understanding the relationship between visual-angle and eye-angle for reliable determination of the field-of-view in ultra-wide field fundus photography	28
Near-infrared, wavelength, and illumination scanning holographic tomography	27
Photodynamic therapy reduces metastasis of breast cancer by minimizing circulating tumor cells	27
Optimized U-Net model for 3D light-sheet image segmentation of zebrafish trunk vessels	27
Systematic meta-analysis of computer-aided detection to detect early esophageal cancer using hyperspectral imaging	27
Rapid detection of hysteromyoma and cervical cancer based on serum surface-enhanced Raman spectroscopy and a support vector machine	26
Multiscale label-free imaging of myelin in human brain tissue with polarization-sensitive optical coherence tomography and birefringence microscopy	25
Large diameter electrically tunable lens for ophthalmic distance accommodation	25
Joint estimation of point spread function and molecule positions in SMLM informed from multiple planes	25
Long-term imaging of three-dimensional hyphal development using the ePetri dish	25
Direct Blood Flow Velocity Measurements of Zebrafish Cerebral Vessels with a Dual-mode Light-Sheet Microscope	25
Noncontact longitudinal shear wave imaging for the evaluation of heterogeneous porcine brain biomechanical properties using optical coherence elastography	25
Deep Learning for the Detection of Colon Polyps with Malignant Potential: Ex Vivo Classification Using Feature-Enhanced Optical Coherence Tomography (OCT) Images	25
Aberration measurement and correction on a large field of view in fluorescence microscopy	25
Method for nanoparticles uptake evaluation based on double labeled fluorescent cells scanned in enhanced darkfield microscopy	25
Modeling and optimization of galvanometric point-scanning temporal dynamics	25
Analytical optimization of the cutting efficiency for generic cavitation bubbles	25
Rapid and cost-effective screening of therapeutic targets for isoquercitrin in insulin resistance using virtual methods and fiber SPR biosensing	25
Optimal calibration of optical tweezers with arbitrary integration time and sampling frequencies: a general framework [Invited]	24
Deep learning and sub-band fluorescence imaging-based method for caries and calculus diagnosis embeddable on different smartphones	24
Adaptive optics scanning laser ophthalmoscopy and optical coherence tomography (AO-SLO-OCT) system for in vivo mouse retina imaging	24
Peripheral detection acuity for interference fringes and screen-based Gabor gratings	24
Deep learning segmentation of the tear fluid reservoir under the sclera lens in optical coherence tomography images	24
Automatic zoning for retinopathy of prematurity with semi-supervised feature calibration adversarial learning	23
Deep learning classification of cervical dysplasia using depth-resolved angular light scattering profiles	23
Mask-guided network for finger vein feature extraction and biometric identification	23
Structural changes in the crystalline lens as a function of the postmortem interval assessed with two-photon imaging microscopy	23
Microbubble dynamics and jetting near tissue-phantom biointerfaces	22
Probabilistic volumetric speckle suppression in OCT using deep learning	22
Comparison of fluorescence lifetime and multispectral imaging for quantitative multiplexing in biological tissue: erratum	22
Image stitching algorithm for super-resolution localization microscopy combined with fluorescence noise prior	22
Fast volumetric multifocus structured illumination microscopy of subcellular dynamics in living cells	22
Attenuation coefficient as a tool to detect changes in the white matter of the rat brain caused by different types of gliomas and irradiation	22

Single-shot quantitative phase microscopy: a multi-functional tool for cell analysis	22
Studying fluctuating trajectories of optically confined passive tracers inside cells provides familiar active forces	22
Regression-based neural network for improving image reconstruction in diffuse optical tomography	22
Three-dimensional image-guided topical photodynamic therapy system with light dosimetry dynamic planning and monitoring	22
In-situ, real-time monitoring of thermo-mechanical properties of biological tissues undergoing laser heating and ablation	21
Discriminating healthy from tumor tissue in breast lumpectomy specimens using deep learning-based hyperspectral imaging	21
A machine learning framework for the quantification of experimental uveitis in murine OCT	21
Motion-less depth-selective optogenetic probe using tapered fiber and an electrically tuneable liquid crystal steering element	21
PCIe-based FPGA-GPU heterogeneous computation for real-time multi-emitter fitting in super-resolution localization microscopy	21
An end-to-end network for segmenting the vasculature of three retinal capillary plexuses from OCT angiographic volumes	21
High-speed, long-range and wide-field OCT for in vivo 3D imaging of the oral cavity achieved by a 600 kHz swept source laser	21
Primary assessment of medicines for expected migrastatic potential with holographic incoherent quantitative phase imaging	21
Spatiotemporal defocus sensitivity function of the human visual system	21
Analysis of the key signaling pathway of baicalin that induces autophagy in papillary thyroid cancer via an optical resonator	21
Confocal reflectance microscopy for mapping collagen fiber organization in the vitreous gel of the eye	21
Blood pressure estimation by spatial pulse-wave dynamics in a facial video	21
Evaluation of Slowfade Diamond as a buffer for STORM microscopy	21
Automatic search for photoacoustic marker using automated transrectal ultrasound	20
Mueller polarimetric imaging as a tool for detecting the effect of non-thermal plasma treatment on the skin	20
Comprehensive advancement in endoscopy: optical design, algorithm enhancement, and clinical validation for merged WLI and CBI imaging	20
Enabling real-time reconstruction for large field-of-view single-molecule localization microscopy using discrete field-dependent point-spread function	20
Multiscale imaging of corneal endothelium damage and Rho-kinase inhibitor application in mouse models of acute ocular hypertension	20
Four-color fluorescence cross-correlation spectroscopy with one laser and one camera	20
Plasmon enhanced luminescence of Tb/Eu co-doped film by Au NRs-PVA nanocomposite film	20
Photoplethysmographic analysis of retinal videodata based on the Fourier domain approach	20
Recovering fetal signals transabdominally through interferometric near-infrared spectroscopy (iNIRS)	20
Localized transverse flow measurement with dynamic light scattering line-scan OCT	20
Polarization properties of retinal blood vessel walls measured with polarization sensitive optical coherence tomography	20
Microfluidic point-of-care testing device for multiplexed detection of liver function blood markers	20
Air-pulse optical coherence elastography: how excitation angle affects mechanical wave propagation	20
Axial scanning of dual focus to improve light sheet microscopy	19
Fiber-laser platform for precision brain surgery	19
Evaluation of a liquid membrane-based tunable lens and a solid-state LIDAR camera feedback system for presbyopia	19
Compact and low-cost deep-ultraviolet microscope system for label-free molecular imaging and point-of-care hematological analysis	19
Attention mechanism-based locally connected network for accurate and stable reconstruction in Cerenkov luminescence tomography	19
Feasibility of the soft attention-based models for automatic segmentation of OCT kidney images	19
Hemodynamics of the sternocleidomastoid measured with frequency domain near-infrared spectroscopy towards non-invasive monitoring during mechanical ventilation	19
Remote laser-speckle sensing of heart sounds for health assessment and biometric identification	19
Deep-learning-based automated measurement of outer retinal layer thickness for use in the assessment of age-related macular degeneration, applicable to both swept-source and spectral-domain OCT imagin	19
Extended focal depth Fourier domain optical coherence microscopy with a Bessel-beam – LP02 mode – from a higher order mode fiber	19
Specific detection of glucose by an optical weak measurement sensor	19
Characterizing the aggressiveness of prostate cancer using an all-optical needle photoacoustic sensing probe: feasibility study	18
Real-time data processing in colorimetry camera-based single-molecule localization microscopy via CPU-GPU-FPGA heterogeneous computation	18
Ultrafast laser bone ablation towards high surgical speeds and clinically relevant operation times for spine surgeries	18
Biocompatible spider silk-based metal-dielectric fiber optic sugar sensor	18
Dynamic optical coherence tomography for cell analysis [Invited]	18
Lock-in functional near-infrared spectroscopy for measurement of the haemodynamic brain response	18
Compression OCT-elastography combined with speckle-contrast analysis as an approach to the morphological assessment of breast cancer tissue	18
Dynamic inverse SNR-decorrelation OCT angiography with GPU acceleration	18
Noninvasive measurement of the vital signs of cancer patients with a dual-path microbend fiber sensor	18
In vivo endoscopic optical coherence elastography based on a miniature probe	18
Characteristics of frontal activity relevant to cognitive function in bipolar depression: an fNIRS study	18
Breath analysis test (TERABio®) for detection of SARS-CoV-2 infection by analysis of volatile organic compounds based on Terahertz technology	18
Preprocessing methods for quantitative phase image stitching	18
Minimizing OCT quantification error via a surface-tracking imaging probe	18
Pressure stimulus study on acupuncture points with multi-channel multimode-fiber diffuse speckle contrast analysis (MMF-DSCA)	18
Method to improve the localization accuracy and contrast recovery of lesions in separately acquired X-ray and diffuse optical tomographic breast imaging	18
Imaging of vitreous cortex hyalocyte dynamics using non-confocal quadrant-detection adaptive optics scanning light ophthalmoscopy in human subjects	18
Nanozyme-active Au@Pt NRs array SERS platform based on a recognition competition strategy for convenient and ultrasensitive detection of miR-106a-5p associated with cerebral infarction	18
Deep learning for denoising in a Mueller matrix microscope	18
Diffuse reflectance spectroscopy sensor to differentiate between glial tumor and healthy brain tissue: a proof-of-concept study	17
Automated microscope-independent fluorescence-guided micropipette	17
Retinal magnification factors at the fixation locus derived from schematic eyes with four individualized surfaces	17
Rapid pseudo-H&E imaging using a fluorescence-inbuilt optical coherence microscopic imaging system	17
Simultaneous measurements of foveal and peripheral aberrations with accommodation in myopic and emmetropic eyes	17
Self-calibrated 3D differential phase contrast microscopy with optimized illumination	17
Study of cerebrovascular reactivity to hypercapnia by imaging photoplethysmography to develop a method for intraoperative assessment of the brain functional reserve	17
Hyper-brain independent component analysis (HB-ICA): an approach for detecting inter-brain networks from fNIRS-hyperscanning data	17
Changes to the shape, orientation and packing of red cells as a function of retinal capillary size	17
Study on the detection method of biological characteristics of hepatoma cells based on terahertz time-domain spectroscopy	17
Fabrication and performance evaluation of a design for an extended depth-of-focus intraocular lens based on an improved sinusoidal profile	17
Multicolor two-photon light-patterning microscope exploiting the spatio-temporal properties of a fiber bundle	17
Non-contact confocal calcium imaging of in vivo murine corneal nerves	17
Ultra-low-cost and high-fidelity NIR-II confocal laser scanning microscope with Bessel beam excitation and SiPM detection	17
In vivo ultrasound modulated optical tomography with a persistent spectral hole burning filter	17
Asymmetric parameter enhancement in the split-ring cavity array for virus-like particle sensing	17
Fiber-optic large-depth 3D chromatic confocal endomicroscopy	17
Multi-modality imaging technologies and machine learning for non-invasive, precise assessment of rabbit endometrium	17
MXene-based SERS spectroscopic analysis of exosomes for lung cancer differential diagnosis with deep learning	17
Out-of-focus signal rejection for in vivo pO2 measurements using two-photon phosphorescence lifetime microscopy	17

Adaptive optics in an oblique plane microscope	17
Robustness of diffuse reflectance spectra analysis by inverse adding doubling algorithm	16
CGAN-rIRN: a data-augmented deep learning approach to accurate classification of mental tasks for a fNIRS-based brain-computer interface	16
DIRECT, a low-cost system for high-speed, low-noise imaging of fluorescent bio-samples	16
Performance assessment of laser sources for time-domain diffuse correlation spectroscopy	16
Application of fluorescence lifetime imaging microscopy to monitor glucose metabolism in pancreatic islets in vivo	16
Rapid clearing and imaging of Mohs and melanoma surgical margins using a low-cost tissue processor	16
In situ measurement of the stiffness increase in the posterior sclera after UV-riboflavin crosslinking by optical coherence elastography	16
Optical design and performance of a trifocal sinusoidal diffractive intraocular lens	16
Femtosecond laser oocyte enucleation as a low-invasive and effective method of recipient cytoplast preparation	16
Portable optical fiber biosensors integrated with smartphone: technologies, applications, and challenges [Invited]	16
Motion-tracking Brillouin microscopy for in-vivo corneal biomechanics mapping	16
Polarization effects on the fluorescence emission of zebrafish neurons using light-sheet microscopy	16
Elimination of stripe artifacts in light sheet fluorescence microscopy using an attention-based residual neural network	16
Retinal reconstruction from peripheral biometry	16
Chirp excitation for natural frequency optical coherence elastography	16
Biometry study of foveal isoplanatic patch variation for adaptive optics retinal imaging	16
Accelerating whole-sample polarization-resolved second harmonic generation imaging in mammary gland tissue via generative adversarial networks	16
Neural-network based high-speed volumetric dynamic optical coherence tomography	16
Rapid, non-invasive measurement of gastric emptying rate using transcutaneous fluorescence spectroscopy	16
Introduction to the Biophotonics Congress 2024 feature issue	16
Recent breakthroughs in digital holography, 2D/3D imaging, and holographic optical elements: introduction	16
Effects of tactile feedback in post-stroke hand rehabilitation on functional connectivity and cortical activation: an fNIRS study	16
Laser pulse train parameters determine the brightness of a two-photon stimulus	16
Embedded CPU-GPU pupil tracking	16
Investigation of the scattering and attenuation properties of cataracts formed in mouse eyes with 1060-nm and 1310-nm swept-source optical coherence tomography	16
Segmentation of anatomical layers and imaging artifacts in intravascular polarization sensitive optical coherence tomography using attending physician and boundary cardinality losses	16
Three-compartment-breast (3CB) prior-guided diffuse optical tomography based on dual-energy digital breast tomosynthesis (DBT)	16
Spectroscopic thermo-elastic optical coherence tomography for tissue characterization: publisher’s note	15
Introduction to the Optics and the Brain 2023 feature issue	15
Dome-APIC illumination design for high space-bandwidth product analytic imaging	15
Realtime and noninvasive assessment of endotracheal tube displacement using near-infrared and visible cameras	15
Non-invasive glucose extraction by a single polarization rotator system in patients with diabetes: erratum	15
Validation of an automated method for studying retinal capillary blood flow	15
Quantitative comparison of spinning disk geometries for PAINT based super-resolution microscopy	15
Imaging and component analysis of pumpkin stem tissue with simultaneous SF-CARS and TPEF microscopy	15
Multimodal illumination platform for 3D single-molecule super-resolution imaging throughout mammalian cells	15
High-performance surface-enhanced Raman spectroscopy chip integrated with a micro-optical system for the rapid detection of creatinine in serum	15
Laser induced forward transfer isolating complex-shaped cell by beam shaping	15
Post-operative monitoring of tissue perfusion in murine skin flaps using enhanced thermal imaging	15
Automated image processing pipeline for adaptive optics scanning light ophthalmoscopy	15
Orbital angular momentum mode fiber force sensing technology based on intensity interrogation	15
Retinal adaptive optics imaging with a pyramid wavefront sensor	15
Assessing depth sensitivity in laser interferometry speckle visibility spectroscopy (iSVS) through source-to-detector distance variation and cerebral blood flow monitoring in humans and rabbits	15
Towards noninvasive white blood cell count	15
Weakly supervised identification of microscopic human breast cancer-related optical signatures from normal-appearing breast tissue	15
Optical neural stimulation using the thermoplasmonic effect of gold nano-hexagon	15
Perceptual cost and benefit of presbyopia-correcting intraocular lenses: effect of energy balance, addition, and adaptation	15
Spatial-temporal correlations in the speckle pattern for the characterization of cellular motion within a 3D object	15
Diffuse correlation tomography: a technique to characterize tissue blood flow abnormalities in benign and malignant breast lesions	15
Identification of late-life depression and mild cognitive impairment via serum surface-enhanced Raman spectroscopy and multivariate statistical analysis	15
Single-input polarization-sensitive optical coherence tomography through a catheter	15
Controlling the optical pathlength in continuous-wave reflectance spectroscopy using polarization	15
Introduction to the feature issue: Advances in Optical Biosensors for Biomedical Applications	15
Computational refocusing of Jones matrix polarization-sensitive optical coherence tomography and investigation of defocus-induced polarization artifacts	15
Clarification on the understanding of contrast theory in relation to the article “ON and OFF receptive field processing in the presence of optical scattering”: comment	15
Investigation of multiple scattering in space and spatial-frequency domains: with application to the analysis of aberration-diverse optical coherence tomography	14
Multi-step deep neural network for identifying subfascial vessels in a dorsal skinfold window chamber model	14
Space curvature-inspired nanoplasmonic sensor for breast cancer extracellular vesicle fingerprinting and machine learning classification	14
Experimental and modeling analysis of lenses with concentric cylindrical annular refractive elements: impact on peripheral imaging	14
Estimation of core body temperature by near-infrared imaging of vein diameter change in the dorsal hand	14
Silver mean sequence in extended depth of focus intraocular lenses: a comparative study of kinoform and stepwise designs	14
Visualization of blood-brain barrier disruption with dual-wavelength high-resolution photoacoustic microscopy	14
Plug-and-play DPC-based quantitative phase microscope	14
Retinal optical coherence tomography image analysis by a restricted Boltzmann machine	14
Diffuse reflectance spectroscopy for accurate margin assessment in breast-conserving surgeries: importance of an optimal number of fibers	14
Simultaneous detection of circulating tumor DNAs using a SERS-based lateral flow assay biosensor for point-of-care diagnostics of head and neck cancer	14
Widefield optical coherence tomography by electro-optical modulation	14
Performance of focus-tunable presbyopia correction lenses operated using gaze-tracking and LIDAR	14
Digital histological staining of tissue slide images from optical coherence microscopy	14
Reconstruction based on adaptive group least angle regression for fluorescence molecular tomography	14
Probing diffusive media through speckle differencing	14
Feature matching for texture-less endoscopy images via superpixel vector field consistency	14
Fast digital refocusing and depth of field extended Fourier ptychography microscopy	14
Portable, smartphone-linked, and miniaturized photonic resonator absorption microscope (PRAM Mini) for point-of-care diagnostics	14
Dual-channel air-pulse optical coherence elastography for frequency-response analysis	14
Individualized modeling for the peripheral optics of the human myopic eye	14
Picosecond laser capture microdissection based on edge catapulting combined with dielectrophoretic force	14
Label-free enzymatic reaction monitoring in water-in-oil microdroplets using ultra-broadband multiplex coherent anti-Stokes Raman scattering spectroscopy	13
UV surface disinfection in a wearable drug delivery device	13
Gastric cancer multicellular spheroid analysis by two-photon microscopy	13
Quantifying UV-induced photodamage for longitudinal live-cell imaging applications of deep-UV microscopy	13
Multi-kernel driven 3D convolutional neural network for automated detection of lung nodules in chest CT scans	13
Robotics and optical coherence tomography: current works and future perspectives [Invited]	13
Soft elastomeric optical fibers for oxygen change measurements of blood and living tissues: a thermoplastic polyurethane assessment	13
A compact photonic resonator absorption microscope for point of care digital resolution nucleic acid molecular diagnostics: publisher’s note	13
Method to determine the centration of a lenticule of tissue extracted from a cornea	13
Chromatic cues for the sign of defocus in the peripheral retina	13
Design and characterization of a time-domain optical tomography platform for mesoscopic lifetime imaging	13
Automated fast label-free quantification of cardiomyocyte dynamics with raw holograms for cardiotoxicity screening	13
Introduction to the Feature Issue on Adaptive Optics for Biomedical Applications	13
Variation of optical properties of mouse brain using an optical clearing agent: experimental and simulation approaches	13
Numerical calibration method for a multiple spectrometer-based OCT system	13
Compact breast shape acquisition system for improving diffuse optical tomography image reconstructions	13
MRI/fluorescence dual-mode probe: its simple preparation method and imaging application in vitro	13