OOIR: Observatory of International Research

Papers

(The H4-Index of npj Systems Biology and Applications is 18. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-04-01 to 2024-04-01.)

Article	Citations
Identifying inhibitors of epithelial–mesenchymal plasticity using a network topology-based approach	68
Gene co-expression in the interactome: moving from correlation toward causation via an integrated approach to disease module discovery	64
Mitigating the risk of cytokine release syndrome in a Phase I trial of CD20/CD3 bispecific antibody mosunetuzumab in NHL: impact of translational system modeling	61
ROS networks: designs, aging, Parkinson’s disease and precision therapies	53
Metabolic modelling reveals broad changes in gut microbial metabolism in inflammatory bowel disease patients with dysbiosis	45
Stratification and prediction of drug synergy based on target functional similarity	33
Comparative transcriptome analysis reveals key epigenetic targets in SARS-CoV-2 infection	32
Sparsely-connected autoencoder (SCA) for single cell RNAseq data mining	32
Nobel Turing Challenge: creating the engine for scientific discovery	32
Adaptive coding for DNA storage with high storage density and low coverage	27
High-throughput toxicogenomic screening of chemicals in the environment using metabolically competent hepatic cell cultures	27
3D convolutional neural networks-based segmentation to acquire quantitative criteria of the nucleus during mouse embryogenesis	25
Cell morphology-based machine learning models for human cell state classification	25
Crosstalk between Plk1, p53, cell cycle, and G2/M DNA damage checkpoint regulation in cancer: computational modeling and analysis	23
Supervised learning of gene-regulatory networks based on graph distance profiles of transcriptomics data	22
Signatures of co-deregulated genes and their transcriptional regulators in colorectal cancer	19
Linking metabolic phenotypes to pathogenic traits among “Candidatus Liberibacter asiaticus” and its hosts	19
An expanded whole-cell model of E. coli links cellular physiology with mechanisms of growth rate control	18
Integrative computational approach identifies drug targets in CD4+ T-cell-mediated immune disorders	18
Dynamic resource allocation drives growth under nitrogen starvation in eukaryotes	18
The in vitro micronucleus assay using imaging flow cytometry and deep learning	18
A global network for network medicine	18