Journal of Pathology Clinical Research

Papers
(The median citation count of Journal of Pathology Clinical Research is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-04-01 to 2025-04-01.)
ArticleCitations
Contribution of tumour and immune cells to PD‐L1 expression as a predictive biomarker in metastatic triple‐negative breast cancer: exploratory analysis from KEYNOTE‐11939
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NTRK gene aberrations in triple‐negative breast cancer: detection challenges using IHC, FISH, RT‐PCR, and NGS30
A novel telomere biology disease‐associated gastritis identified through a whole exome sequencing‐driven approach30
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Tumor‐associated macrophages and risk of recurrence in stage III colorectal cancer23
PRR11 unveiled as a top candidate biomarker within the RBM3‐regulated transcriptome in pancreatic cancer23
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CRLF2 and IKZF1 abnormalities in Mexican children with acute lymphoblastic leukemia and recurrent gene fusions: exploring surrogate markers of signaling pathways18
Assessment of clinical trial protocols for pathology content using the SPIRIT‐Path guidelines highlights areas for improvement18
The activation of EP300 by F11R leads to EMT and acts as a prognostic factor in triple‐negative breast cancers17
Digital image analysis allows objective stratification of patients with silent PIT1‐lineage pituitary neuroendocrine tumors17
Quick Annotator: an open‐source digital pathology based rapid image annotation tool17
Characterizing the tumor microenvironment in rare renal cancer histological types16
Immune checkpoint CD161/LLT1‐associated immunological landscape and diagnostic value in oral squamous cell carcinoma15
Exosome‐derived ANXA9 functions as an oncogene in breast cancer15
More than just acral melanoma: the controversies of defining the disease15
Clinicopathological features and cancer transcriptomic profiling of poorly cohesive gastric carcinoma subtypes14
Correlation of PD‐L1 expression with CD8+ T cells and oxidative stress‐related molecules NRF2 and NQO1 in esophageal squamous cell carcinoma13
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Association between individual Warburg‐related proteins and prognosis in colorectal cancer12
Tumor‐associated lymphocytes and macrophages are related to stromal elastosis and vascular invasion in breast cancer12
Large language models as a diagnostic support tool in neuropathology12
Do explainable AI (XAI) methods improve the acceptance of AI in clinical practice? An evaluation of XAI methods on Gleason grading12
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Preoperative systemic chemotherapy alters the histopathological growth patterns of colorectal liver metastases11
VEGFA gene variants are associated with breast cancer progression11
Deep learning‐based analysis of EGFR mutation prevalence in lung adenocarcinoma H&E whole slide images11
Breast cancer survival prediction using an automated mitosis detection pipeline11
Exploring prognostic biomarkers in pathological images of colorectal cancer patients via deep learning11
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Identification and validation of NFIA as a novel prognostic marker in renal cell carcinoma10
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Translational practice of fluorescence in situ hybridisation to identify neuroblastic tumours with TERT rearrangements9
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Quantitative proteomics identifies biomarkers to distinguish pulmonary from head and neck squamous cell carcinomas by immunohistochemistry9
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First proficiency testing for NGS‐based and combined NGS‐ and FISH‐based detection of FGFR2 fusions in intrahepatic cholangiocarcinoma8
Transcription start site‐level expression of thyroid transcription factor 1 isoforms in lung adenocarcinoma and its clinicopathological significance8
Optimization of deep learning models for the prediction of gene mutations using unsupervised clustering8
Radiotherapy biobanking: current landscape, opportunities, challenges, and future aspirations8
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A robust model training strategy using hard negative mining in a weakly labeled dataset for lymphatic invasion in gastric cancer8
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DecreasedCD11c‐positive dendritic cells in the tumor microenvironment predict double‐hit/triple‐hit genotype and survival in diffuse large B‐cell lymphoma7
Paediatric BCOR‐associated sarcomas with a novel long spliced internal tandem duplication of BCOR exon 157
Somatic mutations in four novel genes contribute to homologous recombination deficiency in breast cancer: a real‐world clinical tumor sequencing study7
The prostate tissue‐based telomere biomarker as a prognostic tool for metastasis and death from prostate cancer after prostatectomy7
Macrophage migration inhibitory factor (MIF) predicts survival in patients with clear cell renal cell carcinoma7
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A combination of stromal PD‐L1 and tumoral nuclear β‐catenin expression as an indicator of colorectal carcinoma progression and resistance to chemoradiotherapy in locally advanced rectal ca6
High cyclin E1 protein, but not gene amplification, is prognostic for basal‐like breast cancer6
Papillary thyroid carcinoma tall cell variant shares accumulation of mitochondria, mitochondrial DNA mutations, and loss of oxidative phosphorylation complex I integrity with oncocytic tumors6
Histopathological tumour microenvironment score independently predicts outcome in primary operable colorectal cancer6
KRT81 and HNF1A expression in pancreatic ductal adenocarcinoma: investigation of predictive and prognostic value of immunohistochemistry‐based subtyping6
The prognostic marker elastin correlates with epithelial–mesenchymal transition and vimentin‐positive fibroblasts in gastric cancer6
Gastric cancer immune microenvironment score predicts neoadjuvant chemotherapy efficacy and prognosis5
Genome‐wide analysis of mRNA and microRNA expression in colorectal cancer and adjacent normal mucosa5
High tumor cell platelet‐derived growth factor receptor beta expression is associated with shorter survival in malignant pleural epithelioid mesothelioma5
KLF2 inhibits colorectal cancer progression and metastasis by inducing ferroptosis via the PI3K/AKT signaling pathway5
Identification and therapeutic evaluation of ALK rearrangements in non‐small‐cell lung cancer4
Homologous recombination deficiency score is an independent prognostic factor in esophageal squamous cell carcinoma4
Aberrant PRDM2 methylation as an early event in serrated lesions destined to evolve into microsatellite‐instable colorectal cancers4
Genomic heterogeneity at baseline is associated with T790M resistance mutations in EGFR‐mutated lung cancer treated with the first‐/second‐generation tyrosine kinase inhibitors4
Post‐neoadjuvant assessment of tumour budding according to ITBCC subgroups delivers stage‐ and regression‐grade independent prognostic information in intestinal‐type gastric aden4
MMR deficiency is frequent in colorectal carcinomas with diffuse SLFN11 immunostaining: clinicopathologic and molecular study of 31 cases identified among 3,300 tumors4
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Follow‐up of intraocular retinoblastoma through the quantitative analysis of conserved nuclear DNA sequences in aqueous humor from patients4
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PD‐L1 expression in megakaryocytes and its clinicopathological features in primary myelofibrosis patients4
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Large multimodal model‐based standardisation of pathology reports with confidence and its prognostic significance4
Spatial analysis of tumor‐infiltrating lymphocytes in histological sections using deep learning techniques predicts survival in colorectal carcinoma4
Understanding the ethical and legal considerations of Digital Pathology4
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AI‐based intra‐tumor heterogeneity score of Ki67 expression as a prognostic marker for early‐stage ER+/HER2− breast cancer4
Cancer‐associated fibroblast expression of glutamine fructose‐6‐phosphate aminotransferase 2 (GFPT2) is a prognostic marker in gastric cancer3
Pattern of placental alkaline phosphatase (PLAP) expression in human tumors: a tissue microarray study on 12,381 tumors3
Validation of the prognostic value of CD3 and CD8 cell densities analogous to the Immunoscore® by stage and location of colorectal cancer: an independent patient cohort study3
PRAME protein expression in DICER1‐related tumours3
Dysbalance of ACE2 levels – a possible cause for severe COVID‐19 outcome in COPD3
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Authors' reply: Re: Koga et al. Retrieval‐augmented generation versus document‐grounded generation: a key distinction in large language models3
KRAS mutations and endometriosis burden of disease3
Integration of NRP1, RGS5, and FOXM1 expression, and tumour necrosis, as a postoperative prognostic classifier based on molecular subtypes of clear cell renal cell car3
Application of direct stochastic optical reconstruction microscopy (dSTORM) to the histological analysis of human glomerular disease3
Comprehensive genomic profiling of pulmonary spindle cell carcinoma using tissue and plasma samples: insights from a real‐world cohort analysis3
CD47 and CD68 expression in breast cancer is associated with tumor‐infiltrating lymphocytes, blood vessel invasion, detection mode, and prognosis3
Increased diagnostic sensitivity of palpation‐guided thyroid nodule fine‐needle aspiration cytology by BRAF V600E‐mutation analysis2
DNA methylation profile discriminates sporadic giant cell granulomas of the jaws and cherubism from their giant cell‐rich histological mimics2
Clinicopathological and epigenetic differences between primary neuroendocrine tumors and neuroendocrine metastases in the ovary2
Closing the loop – the role of pathologists in digital and computational pathology research2
Low‐burden TP53 mutations represent frequent genetic events in CLL with an increased risk for treatment initiation2
CYP2S1 and CYP2W1 expression is associated with patient survival in breast cancer2
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RAD51 as a biomarker for homologous recombination deficiency in high‐grade serous ovarian carcinoma: robustness and interobserver variability of the RAD51 test2
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Expression of proteins associated with the Warburg‐effect and survival in colorectal cancer2
Sarcomatoid areas of urothelial carcinoma are enriched for CD163‐positive antigen‐presenting cells2
PD‐L1 and PD‐L2 expression in pancreatic ductal adenocarcinoma and their correlation with immune infiltrates and DNA damage response molecules2
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Semantic annotation for computational pathology: multidisciplinary experience and best practice recommendations2
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Subtype‐associated complexity and prognostic significance of the NLRP3 inflammasome landscape in pancreatic neoplasms2
Characterisation of cardiac pathology in 23 autopsies of lethalCOVID‐192
Severity of arterial and/or arteriolar sclerosis in IgA nephropathy and the effects of renin–angiotensin system inhibitors on its prognosis2
Altered cytoplasmic and nuclear ADP‐ribosylation levels analyzed with an improved ADP‐ribose binder are a prognostic factor in renal cell carcinoma2
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Comprehensive transcriptomic profiling reveals molecular characteristics and biomarkers associated with risk stratification in papillary thyroid carcinoma1
c‐MYC and p53 expression highlight starry‐sky pattern as a favourable prognostic feature in R‐CHOP‐treated diffuse large B‐cell lymphoma1
The Glasgow Microenvironment Score: an exemplar of contemporary biomarker evolution in colorectal cancer1
Dual epigenetic changes in diabetes mellitus‐associated pancreatic ductal adenocarcinoma correlate with downregulation of E‐cadherin and worsened prognosis1
Pathologic T1 and T2 encapsulated invasive carcinomas arising from mucinous cystic neoplasms of the pancreas have favorable prognosis and might be treated conservatively1
A series of COVID‐19 autopsies with clinical and pathologic comparisons to both seasonal and pandemic influenza1
Reducing the risks of nuclear war – the role of health professionals1
CD24 is a surrogate for ‘immune‐cold’ phenotype in aggressive large B‐cell lymphoma1
Prediction of immunochemotherapy response for diffuse largeB‐cell lymphoma using artificial intelligence digital pathology1
MYC amplifications are common events in childhood osteosarcoma1
Homologous recombination deficiency (HRD) is associated with better prognosis and possibly causes a non‐inflamed tumour microenvironment in nasopharyngeal carcinoma1
Assessing the impact of deep‐learning assistance on the histopathological diagnosis of serous tubal intraepithelial carcinoma (STIC) in fallopian tubes1
Deep learning‐based image analysis reveals significant differences in the number and distribution of mucosal CD3 and γδ T cells between Crohn's disease and ulcerative colitis1
Reliable computational quantification of liver fibrosis is compromised by inherent staining variation1
The effectiveness of neoadjuvant chemoradiotherapy in oesophageal adenocarcinoma with presence of extracellular mucin, signet‐ring cells, and/or poorly cohesive cells1
Cellular dissociation grading on biopsies of pulmonary squamous cell carcinoma provides prognostic information across all stages and is congruent with resection specimen grading1
High expression of insulinoma‐associated protein 1 (INSM1) distinguishes colorectal mixed and pure neuroendocrine carcinomas from conventional adenocarcinomas with diffuse expression of syn1
Colonic epithelial cathelicidin (LL‐37) expression intensity is associated with progression of colorectal cancer and presence of CD8+ T cell infiltrate1
Significance of Siglec‐15 expression in colorectal cancer: association with advanced disease stage and fewer tumor‐infiltrating lymphocytes1
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Oncocytic and spindle cell typical carcinoids of lung: different immunophenotype and biological behavior1
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Volumetric imaging of the tumor microvasculature reflects outcomes and genomic states of clear cell renal cell carcinoma1
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Immunohistochemical characteristics and potential therapeutic regimens of hepatoid adenocarcinoma of the stomach: a study of 139 cases1
Accounting for intensity variation in image analysis of large‐scale multiplexed clinical trial datasets1
Engineering the future of 3D pathology1
Identification of a prognostic signature in colorectal cancer using combinatorial algorithm‐driven analysis1
Tertiary lymphoid structures favor outcome in resected esophageal squamous cell carcinoma1
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