Microscopy

Article	Citations
In This Issue	29
In This Issue	26
Correction to: Electron microscopic visualization of single molecules by tag-mediated metal particle labeling	24
A guide to CNN-based dense segmentation of neuronal EM images	23
Nanoscale visualization of crack tips inside molten corium–concrete interaction debris using 3D-FIB-SEM with multiphase positional misalignment correction	22
Retraction of: The presence of perforated synapses in the striatum after dopamine depletion, is this a sign of maladaptive brain plasticity?	20
Effective alignment method using a diamond notch knife for correlative array tomography	18
Chlamydia psittaci infected cell studies by 4Pi Raman and atomic force microscopy	16
Electron holography observation of electron spin polarization around charged insulating wire	15
Observations of nemaline bodies in muscle biopsies of critically ill patients infected with SARS-CoV-2	14
In This Issue	14
Development of temporal series 4D-STEM and application to relaxation time measurement	13
Editorial: In-situ microscopy	13
Measurement and correction of TEM image distortion using arbitrary samples	13
In This Issue	11
Toward complex observation in electron microscopy using two-dimensional electron detector coupled with phase plate STEM	11
Toward quantitative super-resolution microscopy: molecular maps with statistical guarantees	10
In This Issue	10
Unlocking the potential of large-scale 3D imaging with tissue clearing techniques	8
Axonal regrowth under release of myelin-associated glycoprotein: chemotaxis by pioneer Schwann cells and Cajal’s gigantic clubs	8
Editorial: Virus Microscopy	8
Resolution improvement of differential phase-contrast microscopy via tilt-series acquisition for environmental cell application	8
Three-dimensional electron tomography and recent expansion of its applications in materials science	8
Renewal of the Microscopy Editorial Board	8
In-situ shearing process observation system for soft materials via transmission electron microscopy	7

Study of high–low KPFM on a pn-patterned Si surface	7
In situ pulsed electrical biasing TEM observation of AA7075	7
Detection of autophagy-related structures in fruiting bodies of edible mushroom, Pleurotus ostreatus	7
Machine-learning-based quality-level-estimation system for inspecting steel microstructures	6
Model-based deconvolution for particle analysis applied to a through-focus series of HAADF-STEM images	6
Super-resolution reconstruction based on BM3D and compressed sensing	6
Development of a gas environmental heating specimen holder system using differential pumping	6
Development of tilt-scan system for differential phase contrast scanning transmission electron microscopy	5
Electron transfer in LiMn1.5Ni0.5O4 during charging studied with soft X-ray spectrometry	5
Correction to: Microstructural observation of casein micelles in milk by cryo-electron microscopy of vitreous sections (CEMOVIS)	5
Structures of multisubunit membrane complexes with the CRYO ARM 200	5
Momentum-resolved EELS and CL study on 1D-plasmonic crystal prepared by FIB method	5
Correlative light and volume electron microscopy to study brain development	5
Scanning ion-conductance microscopy with a double-barreled nanopipette for topographic imaging of charged chromosomes	4
Time-resolved electron holography and its application to an ionic liquid specimen	4
Near-field electron ptychography using full-field structured illumination	4
Total third-degree variation for noise reduction in atomic-resolution STEM images	4
Correction to: Glutaraldehyde and uranyl acetate dual fixation combined sputtering/unroofing enables intracellular fatty acids TOF-SIMS imaging with organelle-corresponding subcellular distribution	4
Noise reduction of low-dose electron holograms using the wavelet hidden Markov model	4
Different atomic contrasts in HAADF images and EELS maps of rutile TiO2	4
Basic properties of solidified organic liquids at a cryogenic temperature for electron microscopic visualization and sample preparation of dispersion systems	4
Low-aberration ExB deflector optics for scanning electron microscopy	3
Mesoscopic structural analysis via deep learning processing, with a special reference to in vitro alteration in collagen fibre induced by a gap junction inhibitor	3
In This Issue	3
Cryo-EM performance testing of hardware and data acquisition strategies	3
Protein–lipid interplay at the neuromuscular junction	3
Effect of amorphous carbon coating on the performance of liquid phase transmission electron microscopy (LP-TEM) and the dynamics of enclosed Pt nano-colloids	3
Appressed, directed and silicified trichomes of the kudzu climbing vine	3
Glutaraldehyde and uranyl acetate dual fixation combined sputtering/unroofing enables intracellular fatty acids TOF-SIMS imaging with organelle-corresponding subcellular distribution	3
Ultrastructural characteristics of finger-like membrane protrusions in cell competition	3
A novel technique of STEM observation of TEM section using LVSEM and application of pathological diagnosis of renal biopsy	3
Bioimaging of glucose analogs labeled at the C-1 or C-2 position with a fluorescent dansylamino group	3
A functional platform for remote use of electron microscopes using web conferencing systems	3
Correction to: Estimation of projection parameter distribution and initial model generation in single-particle analysis	3
Development of silicon-on-insulator direct electron detector with analog memories in pixels for sub-microsecond imaging	3
Phase retrieval of electron rocking curves using total variation and total squared variation regularizations	3
Correlative volume-imaging using combined array tomography and FIB-SEM tomography with beam deceleration for 3D architecture visualization in tissue	3
Nondestructive initial-profile-free 3D elemental mapping in multilayer thin film structures based on EDX and a quadratic programming problem	3
Evaluating the roughness dynamics of kefir biofilms grown on Amazon cupuaçu juice: a monofractal and multifractal approach	2
Tight-junction strand networks and tightness of the epithelial barrier	2
In This Issue	2
Simultaneous observation of multiple interferograms with Mach-Zehnder type electron interferometer on a 1.2-MV field-emission transmission electron microscope	2
Comparison of large-volume 3D reconstruction using plasma FIB-SEM and X-ray CT	2
Recent advances in in-resin correlative light and electron microscopy of Epon-embedded cells	2
Optimization of method for cross-section hydrogels preparation using high-pressure freezing	2
Data-driven electron microscopy: electron diffraction imaging of materials structural properties	2
Analysis of spatial point patterns in electron-counting images	2
Three-dimensional structure analysis of mouse nails using synchrotron radiation	2
Application of deproteinized bovine bone mineral as proangiogenic scaffold for alveolar bone formation in beagle dogs	2
Enhancing performance of electron holography with mathematical and machine learning–based denoising techniques	2

Quadruple node of triple junctions of grain boundaries in a Eu2+-doped solid solution of the ions K+, Rb+, Cl− and Br−: an epifluorescence microscopy study using the doping ion as a fluorochrome	2
In This Issue	2
Structural and electronic characterization of fluorine-doped La0.5Sr0.5CoO3−δ using electron energy-loss spectroscopy	2
Prediction of secondary electron yield for metal materials using deep learning	2
Reliable electrochemical setup for in situ observations with an atmospheric SEM	2
Three-dimensional visualization of plant tissues and organs by X-ray micro–computed tomography	2
In This Issue	2
Distribution of amniotic stem cells in human term amnion membrane	2
In-situ heating-and-electron tomography for materials research: from 3D (in-situ 2D) to 4D (in-situ 3D)	2
A tool for live-cell confocal imaging of temperature-dependent organelle dynamics	2
Correction to: Electron holography observation of electron spin polarization around charged insulating wire	2
Deciphering prefrontal circuits underlying stress and depression: exploring the potential of volume electron microscopy	2
A specific technique of immunolabelling of urinary small extracellular vesicle biomarkers for the diagnostic of renal cancer	2
Three-dimensional nanostructure analysis of non-stained Nafion in fuel-cell electrode by combined ADF-STEM tomography	1
Spatial resolution in secondary-electron microscopy	1
Application of Hilbert-differential phase contrast to scanning transmission electron microscopy	1
Analyzing the synchronism of stacking-fault formation in side-by-side SiC nanowire pairs using the Levenshtein distance: stochastic versus deterministic processes	1
Electron microscopic visualization of single molecules by tag-mediated metal particle labeling	1
Study on the dissolution of β-precipitates in the Zr–1Nb alloy under the influence of Ne ion irradiation	1
3D mesoscopic architecture of a heterogeneous cellular network in the cementum–periodontal ligament–alveolar bone complex	1
Three-dimensionally visualized rhizoid system of moss, Physcomitrium patens, by refraction-contrast X-ray micro-computed tomography	1
Development of a localized surface plasmon–enhanced electron beam–pumped nanoscale light source for electron beam excitation–assisted optical microscopy	1
Encapsulation, vacuolation and phagocytosis of the opportunistic fungal pathogen Cryptococcus in the liver of an immunocompetent host	1
Hybrid mode atomic force microscopy of phase modulation and frequency modulation	1
Identifying proteins in the cell by tagging techniques for cryo-electron microscopy	1
Optical microscopic imaging, manipulation, and analysis methods for morphogenesis research	1
Removal of phase residues in electron holography	1
Scanning electron microscopy of Escherichia coli encapsulated in a spacerized graphene sandwich	1
Diffraction contrast of ferroelectric domains in DPC STEM images	1
The Third Japan–Canada Microscopy Societies Joint Symposium 2022	1
Correction to: High-resolution and analytical electron microscopy in a liquid flow cell via gas purging	1
Using a novel CLEM system to localize lipid droplets and membranes in desiccated embryonic axis cells of soybean seeds	1
Correction to: Advances in fluorescence microscopy for orthohantavirus research	1
Imaging simulation of charged nanowires in TEM with large defocus distance	1
Self-absorption effect in soft X-ray emission spectra utilized for bandgap evaluation of semiconductors	1
Fine cryo-SEM observation of the microstructure of emulsions frozen via high-pressure freezing	1
Low-dose measurement of electric potential distribution in organic light-emitting diode by phase-shifting electron holography with 3D tensor decomposition	1
Extraction of phase information approximating the demagnetization field within a thin-foiled magnet using electron holography observation	1
Evolution in X-ray analysis from micro to atomic scales in aberration-corrected scanning transmission electron microscopes	1
Attosecond electron-beam technology: a review of recent progress	1
Kelvin probe force microscopy for material characterization	1
Visualization of Arabidopsis root system architecture in 3D by refraction-contrast X-ray micro-computed tomography	1
Advances in fluorescence microscopy for orthohantavirus research	1
Analytical technique for self-absorption structure of iron L-emission spectra obtained by soft X-ray emission spectrometer	1
Single-molecule localization microscopy based on denoising, interpolation and local maxima	1
Design and fabrication of an electrochemical chip for liquid-phase transmission electron microscopy	1
In situ observation of the chemical bonding state of Si in the molten state of eutectic Au–Si alloy of Au81Si19 by using a soft X-ray emission spectroscopy electron microscope	1
Surface sensitivity of atomic-resolution secondary electron imaging	1
In This Issue	1
Lorentz scanning electron/ion microscopy	1
Development and applications of ultrafast transmission electron microscopy	0
Bayesian inference of atomic column positions in scanning transmission electron microscopy images	0
Applications of electron microscopic observations to electrochemistry in liquid electrolytes for batteries	0
Retraction of: Ultrastructural immunohistochemical study of L-type amino acid transporter 1–4F2 heavy chain in tumor microvasculatures of N-butyl-N-(4-hydroxybutyl) nitrosamine (BBN) induced rat bladd	0
HIV-1 transmission: modelling and direct visualization in the third dimension	0
Spatiotemporal resolution in high-speed atomic force microscopy for studying biological macromolecules in action	0
Characteristics and exchange interactions observed in L-emission spectra of Fe, Mn and their oxides by using a high-energy-resolution soft X-ray emission spectroscopy instrument	0
High-resolution and analytical electron microscopy in a liquid flow cell via gas purging	0
Visualization of three-dimensional stigmoid body in FFPE and ultrathin sections of mouse	0
Estimation of projection parameter distribution and initial model generation in single-particle analysis	0
In This Issue	0
High-precision charge analysis in a catalytic nanoparticle by electron holography	0
Wire-tracking of bent electric cable using X-ray CT and deep active learning	0
Observation of morphological changes in silicon-based negative-electrode active materials during charging/discharging using Operando scanning electron microscopy	0
Role of lipids in the organization of tight junction	0
Memory-efficient semantic segmentation of large microscopy images using graph-based neural networks	0
Improved chemical fixation of lipid-secreting plant cells for transmission electron microscopy	0
Advances in ultrahigh-energy resolution EELS: phonons, infrared plasmons and strongly coupled modes	0
The 70th anniversary issue: Preface	0
Recent progress and future perspective of electron cryomicroscopy for structural life sciences	0
Effects of aging on basement membrane of tibialis anterior muscle during recovery following muscle injury in rats	0
In This Issue	0
Correction to: Low-dose measurement of electric potential distribution in organic light-emitting diode by phase-shifting electron holography with 3D tensor decomposition	0
Exploring the influence of focused ion beam processing and scanning electron microscopy imaging on solid-state electrolytes	0
In situ TEM studies on hydrogen-related issues: hydrogen storage, hydrogen embrittlement, fuel cells and electrolysis	0
Reducing manual operation time to obtain a segmentation learning model for volume electron microscopy using stepwise deep learning with manual correction	0
Advanced observation of brain and nerve cells using two-photon microscopy with novel techniques	0
Microscopy and biomimetics: the NanoSuit® method and image retrieval platform	0
Electron microscopy for polymer structures	0
Dose-efficient phase-contrast imaging of thick weak phase objects via OBF STEM using a pixelated detector	0

Flow cytometric detection and microscopic observation of activated eosinophils in peripheral blood	0
Spin polarization of photoelectrons emitted from spin-orbit coupled surface states of Pb/Ge(111)	0
In This Issue	0
Experimental investigation and simulation of SEM image intensity behaviors for developing thickness-controlled S/TEM lamella preparation via FIB-SEM	0
Correlative light and electron microscopy of poly(ʟ-lactic acid) spherulites for fast morphological measurements using a convolutional neural network	0
A simple coordinate transformation method for quickly locating the features of interest in TEM samples	0
Progress in spatial resolution of structural analysis by cryo-EM	0
Contrast mechanism at landing energy near 0 eV in super low-energy scanning electron microscopy	0
In This Issue	0
In situ observation of the deterioration process of sulfide-based solid electrolytes using airtight and air-flow TEM systems	0
A preparation of bacterial outer membrane with osmium tetroxide and uranyl acetate co-stain enables improved structural determination by transmission electron microscopy	0
Correction to: Spatial resolution in secondary-electron microscopy	0
In This Issue	0
Disodium hydrogen phosphate facilitates the gold enhancement reaction of nanogold in the pre-embedding immunoelectron microscopy	0
Whole-cell observation of ZIO-stained Golgi apparatus in rat hepatocytes with serial block-face scanning electron microscope, SBF-SEM	0
Spatial and phase resolution in electron microscopy	0
Correction to: Structures of multisubunit membrane complexes with the CRYO ARM 200	0
Computational evaluation of sparse coding on off-axis electron holograms: comparison between charge-coupled device and direct-detection device cameras	0
A quantitative analysis of bone lamellarity and bone collagen linearity induced by distinct dosing and frequencies of teriparatide administration in ovariectomized rats and monkeys	0
Low-energy scanning transmission electron microscopy applied to ice-embedded biological macromolecules	0
Electron irradiation damage of amorphous epoxy resin at low electron doses	0
Correction to: Observation and quantitative analysis of dislocations in steel using electron channeling contrast imaging method with precise control of electron beam incident direction	0
Evaluation of image distortion in SEM by using a dot-array–based certified reference material	0
A novel embedding composition for the evaluation of the internal structure of carbon materials using electron microscopy	0
Acceptance characterization of electron detector in SEM using stainless steel sphere	0
Recent advancement and human tissue applications of volume electron microscopy	0
In This Issue	0
Edge effect of wide spectrum denoising in super-resolution microscopy	0
Depth sectioning using environmental and atomic-resolution STEM	0
In This Issue	0
Label-free microscopy for virus infections	0
Measuring mechanical properties with high-speed atomic force microscopy	0
Real-time scanning electron microscopy of unfixed tissue in the solution using a deformable and electron-transmissive film	0
Attention-guided multi-scale deep object detection framework for lymphocyte analysis in IHC histological images	0
Single-molecule observation of self-propagating amyloid fibrils	0
In This Issue	0
In-situ TEM study from the perspective of holders	0
Effect of learning parameters on the performance of the U-Net architecture for cell nuclei segmentation from microscopic cell images	0
Miniature microscopes for manipulating and recording in vivo brain activity	0
In This Issue	0
Improved efficiency in automated acquisition of ultra-high-resolution electron holograms using automated target detection	0
Efficient Data Sampling Scheme to Reduce Acquisition Time in Statistical ALCHEMI	0
Applications of deep learning in electron microscopy	0
Limitations and drawbacks of DQE estimation methods applied to electron detectors	0
Simple derivation of L-absorption spectra of 3d transition metal elements by the self-absorption effect observed in soft X-ray emission spectra	0
Precise positional alignment of atom-resolved HAADF images of heteroepitaxial interface with low signal-to-noise ratio	0
Verification of permeability for ionic liquid into biological specimens by using a mass spectrometer	0
Artifactual atomic displacements on surfaces using annular dark-field images with image simulation	0
Classifying liganded states in heterogeneous single-particle cryo-EM datasets	0
Dynamics, structure and assembly of the basement membrane in developing salivary glands revealed by an exogenous EGFP-tagged nidogen probe	0
In This Issue	0
Cryo-electron microscopy of the giant viruses	0
Ultrastructural examination of mouse kidney glomerular capillary loop by sandwich freezing and freeze-substitution	0
Cinematographic study of stochastic chemical events at atomic resolution	0
Forty years in cryoEM of membrane proteins	0
Precise measurement of spatial coherence and axial brightness based on the Wigner function reconstruction in transmission electron microscopes with field emission guns and a thermionic emission gun	0
IN THIS ISSUE	0
Perspective and prospects of in situ transmission/scanning transmission electron microscopy	0
In This Issue	0
Microstructural observation of the swollen catalyst layers of fuel cells by cryo-TEM	0
On-grid labeling method for freeze-fracture replicas	0
Using elemental staining and mapping techniques for simultaneous visualization of biological structures in the nucleus by multichannel electron microscopy	0
Correction to: Low-energy scanning transmission electron microscopy applied to ice-embedded biological macromolecules	0
Visualization of Bacillus subtilis spore structure and germination using quick-freeze deep-etch electron microscopy	0
Retraction to: Self-assembly of nickel icosahedrons and truncated octahedral nanocrystals on a SrTiO3 (111) support	0
Fast computational approach with prior dimension reduction for three-dimensional chemical component analysis using CT data of spectral imaging	0
Spatial frequency–based correction of the spherical aberration in living brain imaging	0
Magnetic field observation in a magnetic tunnel junction by scanning transmission electron microscopy	0
Sandwich freezing and freeze substitution of Arabidopsis plant tissues for electron microscopy	0
Anisotropic electronic structure study of MgB2C2 using soft X-ray emission spectroscopy microscopes	0
Simultaneous secondary electron microscopy in the scanning transmission electron microscope with applications for in situ studies	0
Morphological components detection for super-depth-of-field bio-micrograph based on deep learning	0
Semiautomatic contour tracking method for biological object segmentation in thin-section electron microscope images with modified zero DC component–type Gabor wavelets	0
Atomic-resolution STEM image denoising by total variation regularization	0
70th anniversary issue: Preface	0
In This Issue	0
Live-cell imaging probes to track chromatin modification dynamics	0
Serial ultrathin sections to identify ultrastructural localization of GLUT1 molecules in vesicles in brain endothelial cells—correlative light and electron microscopy in depth	0
Malaria parasite classification framework using a novel channel squeezed and boosted CNN	0
Magnetization controlled by crystallization in soft magnetic Fe-Si-B-P-Cu alloys	0
In This Issue	0
Compact laboratory-based X-ray microscope enabling nondestructive 3D structure acquisition of mouse nephron with high speed and better user accessibility	0
Super-resolution method for SEM images based on pixelwise weighted loss function	0
Classification for transmission electron microscope images from different amorphous states using persistent homology	0
Surface potential distribution of resist exposed by electron beam and the non-charging exposure conditions	0
Imaging neural circuit pathology of autism spectrum disorders: autism-associated genes, animal models and the application ofin vivotwo-photon imaging	0
Development of an integrated high-voltage electron microscope–gas chromatograph–quadrupole mass spectrometer system for the operando analysis of catalytic gas reactions	0
Resolution does matter	0
Inhibition of retinoid X receptor improved the morphology, localization of desmosomal proteins and paracellular permeability in three-dimensional cultures of mouse keratino	0
Improved dopant fraction variance estimation in statistical ALCHEMI based on correct error propagation rule	0
Operando observation of magnetism in HDD writing heads by spin-polarized scanning electron microscopy	0
Filovirus helical nucleocapsid structures	0
Observation and quantitative analysis of dislocations in steel using electron channeling contrast imaging method with precise control of electron beam incident direction	0
Feasibility of control of particle assembly by dielectrophoresis in liquid-cell transmission electron microscopy	0
In situ microscopy techniques for understanding Li plating and stripping in solid-state batteries	0