OOIR: Observatory of International Research

Papers

(The median citation count of Microscopy is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)

Article	Citations
Applications of deep learning in electron microscopy	29
Phase plates in the transmission electron microscope: operating principles and applications	28
Miniature microscopes for manipulating and recording in vivo brain activity	26
Advances in ultrahigh-energy resolution EELS: phonons, infrared plasmons and strongly coupled modes	24
Forty years in cryoEM of membrane proteins	23
Toward quantitative electromagnetic field imaging by differential-phase-contrast scanning transmission electron microscopy	23
Interaction of human erythrocyte catalase with air–water interface in cryoEM	22
Malaria parasite classification framework using a novel channel squeezed and boosted CNN	19
Cryo-EM performance testing of hardware and data acquisition strategies	18
Kelvin probe force microscopy for material characterization	16
Live-cell imaging probes to track chromatin modification dynamics	15
Development of tilt-scan system for differential phase contrast scanning transmission electron microscopy	14
Attention-guided multi-scale deep object detection framework for lymphocyte analysis in IHC histological images	14
Local structure analysis of amorphous materials by angstrom-beam electron diffraction	14
Data-driven electron microscopy: electron diffraction imaging of materials structural properties	13
Spatiotemporal resolution in high-speed atomic force microscopy for studying biological macromolecules in action	13
In situ observation of the deterioration process of sulfide-based solid electrolytes using airtight and air-flow TEM systems	13
Spatial and phase resolution in electron microscopy	11
Cryo-electron microscopy of the giant viruses	10
Recent progress and future perspective of electron cryomicroscopy for structural life sciences	10
Correlation of organelle dynamics between light microscopic live imaging and electron microscopic 3D architecture using FIB-SEM	10
Atomic-resolution STEM image denoising by total variation regularization	9
Effect of learning parameters on the performance of the U-Net architecture for cell nuclei segmentation from microscopic cell images	8
Evolution in X-ray analysis from micro to atomic scales in aberration-corrected scanning transmission electron microscopes	8
Three-dimensional electron tomography and recent expansion of its applications in materials science	8

Improved chemical fixation of lipid-secreting plant cells for transmission electron microscopy	8
Correlative light and volume electron microscopy to study brain development	8
Attosecond electron-beam technology: a review of recent progress	8
Fabrication of a liquid cell for in situ transmission electron microscopy	8
Effect of nitrogen-containing bisphosphonates on osteoclasts and osteoclastogenesis: an ultrastructural study	7
Electron microscopy for polymer structures	7
Scanning ion-conductance microscopy with a double-barreled nanopipette for topographic imaging of charged chromosomes	7
Visualization of Arabidopsis root system architecture in 3D by refraction-contrast X-ray micro-computed tomography	7
Study of high–low KPFM on a pn-patterned Si surface	7
Evaluating the roughness dynamics of kefir biofilms grown on Amazon cupuaçu juice: a monofractal and multifractal approach	6
Protein–lipid interplay at the neuromuscular junction	6
Spatial resolution in secondary-electron microscopy	6
Morphological components detection for super-depth-of-field bio-micrograph based on deep learning	6
A photoswitchable fluorescent protein for hours-time-lapse and sub-second-resolved super-resolution imaging	6
Tight-junction strand networks and tightness of the epithelial barrier	5
Deep convolutional neural network image processing method providing improved signal-to-noise ratios in electron holography	5
Sandwich freezing device for rapid freezing of viruses, bacteria, yeast, cultured cells and animal and human tissues in electron microscopy	5
Distribution of amniotic stem cells in human term amnion membrane	5
Electron irradiation damage of amorphous epoxy resin at low electron doses	4
Computational evaluation of sparse coding on off-axis electron holograms: comparison between charge-coupled device and direct-detection device cameras	4
Performance of a silicon-on-insulator direct electron detector in a low-voltage transmission electron microscope	4
Detection of autophagy-related structures in fruiting bodies of edible mushroom, Pleurotus ostreatus	4
Development and applications of ultrafast transmission electron microscopy	4
Measurement of cell volume using in-line digital holography	4
Fine cryo-SEM observation of the microstructure of emulsions frozen via high-pressure freezing	4
Machine-learning-based quality-level-estimation system for inspecting steel microstructures	4
Effects of aging on basement membrane of tibialis anterior muscle during recovery following muscle injury in rats	4
Exploring the influence of focused ion beam processing and scanning electron microscopy imaging on solid-state electrolytes	4
Three-dimensional visualization of plant tissues and organs by X-ray micro–computed tomography	4
Development of a gas environmental heating specimen holder system using differential pumping	4
Reducing manual operation time to obtain a segmentation learning model for volume electron microscopy using stepwise deep learning with manual correction	3
Measuring mechanical properties with high-speed atomic force microscopy	3
Filovirus helical nucleocapsid structures	3
3D mesoscopic architecture of a heterogeneous cellular network in the cementum–periodontal ligament–alveolar bone complex	3
Glutaraldehyde and uranyl acetate dual fixation combined sputtering/unroofing enables intracellular fatty acids TOF-SIMS imaging with organelle-corresponding subcellular distribution	3
A quantitative analysis of bone lamellarity and bone collagen linearity induced by distinct dosing and frequencies of teriparatide administration in ovariectomized rats and monkeys	3
Temporal resolution in transmission electron microscopy using a photoemission electron source	3
Classifying liganded states in heterogeneous single-particle cryo-EM datasets	3
Analytical technique for self-absorption structure of iron L-emission spectra obtained by soft X-ray emission spectrometer	3
Toward complex observation in electron microscopy using two-dimensional electron detector coupled with phase plate STEM	3
Phase imaging dislocations using diffracted beam interferometry	3
Evaluation of image distortion in SEM by using a dot-array–based certified reference material	3
Magnetization controlled by crystallization in soft magnetic Fe-Si-B-P-Cu alloys	3
Recent advances in in-resin correlative light and electron microscopy of Epon-embedded cells	3
Development of temporal series 4D-STEM and application to relaxation time measurement	3
Optical microscopic imaging, manipulation, and analysis methods for morphogenesis research	2
Improved efficiency in automated acquisition of ultra-high-resolution electron holograms using automated target detection	2
Identifying proteins in the cell by tagging techniques for cryo-electron microscopy	2
A specific technique of immunolabelling of urinary small extracellular vesicle biomarkers for the diagnostic of renal cancer	2
Time-resolved electron holography and its application to an ionic liquid specimen	2

Ultrastructural evidence for an unusual mode of ciliogenesis in mouse multiciliated epithelia	2
Microstructural observation of the swollen catalyst layers of fuel cells by cryo-TEM	2
Feasibility of control of particle assembly by dielectrophoresis in liquid-cell transmission electron microscopy	2
Inhibition of retinoid X receptor improved the morphology, localization of desmosomal proteins and paracellular permeability in three-dimensional cultures of mouse keratino	2
TEM and STEM-EDS evaluation of metal nanoparticle encapsulation in GroEL/GroES complexes according to the reaction mechanism of chaperonin	2
Ultrastructural examination of mouse kidney glomerular capillary loop by sandwich freezing and freeze-substitution	2
Design and fabrication of an electrochemical chip for liquid-phase transmission electron microscopy	2
Advances in fluorescence microscopy for orthohantavirus research	2
Correlative volume-imaging using combined array tomography and FIB-SEM tomography with beam deceleration for 3D architecture visualization in tissue	2
Reliable electrochemical setup for in situ observations with an atmospheric SEM	2
Super-resolution reconstruction based on BM3D and compressed sensing	2
High-resolution and analytical electron microscopy in a liquid flow cell via gas purging	2
Microscopy and biomimetics: the NanoSuit® method and image retrieval platform	2
Label-free microscopy for virus infections	2
Lorentz scanning electron/ion microscopy	2
Classification for transmission electron microscope images from different amorphous states using persistent homology	2
Three-dimensionally visualized rhizoid system of moss, Physcomitrium patens, by refraction-contrast X-ray micro-computed tomography	2
Electron microscopic visualization of single molecules by tag-mediated metal particle labeling	2
Evaluation of TEM specimen quality prepared by focused ion beam using symmetry breaking index of convergent-beam electron diffraction	2
Structures of multisubunit membrane complexes with the CRYO ARM 200	2
Electron holography observation of electron spin polarization around charged insulating wire	2
Cinematographic study of stochastic chemical events at atomic resolution	2
Single-molecule observation of self-propagating amyloid fibrils	2
Imaging neural circuit pathology of autism spectrum disorders: autism-associated genes, animal models and the application ofin vivotwo-photon imaging	2
Damage-less observation of polymers by electron dose control in scanning electron microscope	2
Progress in spatial resolution of structural analysis by cryo-EM	2
Characteristics and exchange interactions observed in L-emission spectra of Fe, Mn and their oxides by using a high-energy-resolution soft X-ray emission spectroscopy instrument	1
Hybrid mode atomic force microscopy of phase modulation and frequency modulation	1
Study on the dissolution of β-precipitates in the Zr–1Nb alloy under the influence of Ne ion irradiation	1
Comparison of large-volume 3D reconstruction using plasma FIB-SEM and X-ray CT	1
Effect of amorphous carbon coating on the performance of liquid phase transmission electron microscopy (LP-TEM) and the dynamics of enclosed Pt nano-colloids	1
Depth sectioning using environmental and atomic-resolution STEM	1
Momentum-resolved EELS and CL study on 1D-plasmonic crystal prepared by FIB method	1
Advanced observation of brain and nerve cells using two-photon microscopy with novel techniques	1
In-situ shearing process observation system for soft materials via transmission electron microscopy	1
Compact laboratory-based X-ray microscope enabling nondestructive 3D structure acquisition of mouse nephron with high speed and better user accessibility	1
Operando observation of magnetism in HDD writing heads by spin-polarized scanning electron microscopy	1
Direct observation of the moment of nucleation from a solution by TEM	1
Study on the heterogeneous material coupling connection characteristics and mechanical strength of Oratosquilla oratoria mantis shrimp saddle	1
Whole-cell observation of ZIO-stained Golgi apparatus in rat hepatocytes with serial block-face scanning electron microscope, SBF-SEM	1
Real-time scanning electron microscopy of unfixed tissue in the solution using a deformable and electron-transmissive film	1
Scanning electron microscopy of Escherichia coli encapsulated in a spacerized graphene sandwich	1
Application of deproteinized bovine bone mineral as proangiogenic scaffold for alveolar bone formation in beagle dogs	1
Structural and electronic characterization of fluorine-doped La0.5Sr0.5CoO3−δ using electron energy-loss spectroscopy	1
A novel technique of STEM observation of TEM section using LVSEM and application of pathological diagnosis of renal biopsy	1
Correction to: Low-energy scanning transmission electron microscopy applied to ice-embedded biological macromolecules	1
Electron transfer in LiMn1.5Ni0.5O4 during charging studied with soft X-ray spectrometry	1
Serial ultrathin sections to identify ultrastructural localization of GLUT1 molecules in vesicles in brain endothelial cells—correlative light and electron microscopy in depth	1
Effective alignment method using a diamond notch knife for correlative array tomography	1
Verification of permeability for ionic liquid into biological specimens by using a mass spectrometer	1
Transmission electron microscopy study on the phase transformation of metastable precipitates to stable phases	1
Cryogenic electron microscopy approaches that combine images and tilt series	1
Simultaneous secondary electron microscopy in the scanning transmission electron microscope with applications for in situ studies	1
Perspective and prospects of in situ transmission/scanning transmission electron microscopy	1
Diffraction contrast of ferroelectric domains in DPC STEM images	1
Low-dose measurement of electric potential distribution in organic light-emitting diode by phase-shifting electron holography with 3D tensor decomposition	1
Quadruple node of triple junctions of grain boundaries in a Eu2+-doped solid solution of the ions K+, Rb+, Cl− and Br−: an epifluorescence microscopy study using the doping ion as a fluorochrome	1
Prediction of secondary electron yield for metal materials using deep learning	1
Different atomic contrasts in HAADF images and EELS maps of rutile TiO2	1
Magnetic field observation in a magnetic tunnel junction by scanning transmission electron microscopy	1
Model-based deconvolution for particle analysis applied to a through-focus series of HAADF-STEM images	1
Dynamics, structure and assembly of the basement membrane in developing salivary glands revealed by an exogenous EGFP-tagged nidogen probe	1
In situ microscopy techniques for understanding Li plating and stripping in solid-state batteries	1
Orbital angular momentum-resolved convergent-beam electron diffraction by the post-selected injection of electron beam	1
Resolution does matter	1
A preparation of bacterial outer membrane with osmium tetroxide and uranyl acetate co-stain enables improved structural determination by transmission electron microscopy	1