Microbiologyopen

Papers
(The TQCC of Microbiologyopen is 9. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-02-01 to 2024-02-01.)
ArticleCitations
Impact of antibiotics on the human microbiome and consequences for host health141
The incidence of antibiotic resistance within and beyond the agricultural ecosystem: A concern for public health103
Environmental hotspots for antibiotic resistance genes51
Raman spectra‐based deep learning: A tool to identify microbial contamination46
Microbial interaction between the succinate‐utilizing bacterium Phascolarctobacterium faecium and the gut commensal Bacteroides thetaiotaomicron44
Antimicrobial properties of Lactobacillus cell‐free supernatants against multidrug‐resistant urogenital pathogens44
Mobile fosfomycin resistance genes in Enterobacteriaceae—An increasing threat39
Effects of exercise frequency on the gut microbiota in elderly individuals39
Bactericidal and virucidal activity of ethanol and povidone‐iodine35
A protocol for recombinant protein quantification by densitometry31
Microbial community and metabolic function analysis of cigar tobacco leaves during fermentation30
The day‐to‐day stability of the ruminal and fecal microbiota in lactating dairy cows28
Microbiota succession during aerobic stability of maize silage inoculated with Lentilactobacillus buchneri NCIMB 40788 and Lentilactobacillus hilgardii CNCM‐I‐478528
Vibrios from the Norwegian marine environment: Characterization of associated antibiotic resistance and virulence genes27
Genomic insights into a plant growth‐promoting Pseudomonas koreensis strain with cyclic lipopeptide‐mediated antifungal activity23
Assessment of microbiota present on a Portuguese historical stone convent using high‐throughput sequencing approaches23
An oral health optimized diet reduces the load of potential cariogenic and periodontal bacterial species in the supragingival oral plaque: A randomized controlled pilot study21
Characterization and comparison of the bacterial microbiota in different gastrointestinal tract compartments of Mongolian horses21
Captivity affects diversity, abundance, and functional pathways of gut microbiota in the northern grass lizard Takydromus septentrionalis20
Changes in the community structure of the symbiotic microbes of wild amphibians from the eastern edge of the Tibetan Plateau20
Impact of host intraspecies genetic variation, diet, and age on bacterial and fungal intestinal microbiota in tigers19
Plasmodium berghei Gamete Egress Protein is required for fertility of both genders18
Physiological and gut microbiome changes associated with low dietary protein level in genetically improved farmed tilapia (GIFT, Oreochromis niloticus) determined by 16S rRNA sequence analysis18
Optimized bacterial DNA isolation method for microbiome analysis of human tissues18
Penicillin‐binding protein PBP2a provides variable levels of protection toward different β‐lactams in Staphylococcus aureus RN422018
Multilocus sequence typing of Escherichia coli isolates from urinary tract infection patients and from fecal samples of healthy subjects in a college community17
Phytoplankton‐derived zwitterionic gonyol and dimethylsulfonioacetate interfere with microbial dimethylsulfoniopropionate sulfur cycling17
Gut microbial diversity and stabilizing functions enhance the plateau adaptability of Tibetan wild ass (Equus kiang)17
Metagenomic strategies identify diverse integron‐integrase and antibiotic resistance genes in the Antarctic environment17
Schiff bases of sulphonamides as a new class of antifungal agent against multidrug‐resistant Candida auris17
Marine biofilms on different fouling control coating types reveal differences in microbial community composition and abundance16
Pseudomonas glycinae sp. nov. isolated from the soybean rhizosphere16
Novel nitrite reductase domain structure suggests a chimeric denitrification repertoire in the phylum Chloroflexi16
Microbial community overlap between the phyllosphere and rhizosphere of three plants from Yongxing Island, South China Sea16
Bacterial community dynamics in spontaneous sourdoughs made from wheat, spelt, and rye wholemeal flour15
Low‐carbohydrate high‐fat weight reduction diet induces changes in human gut microbiota15
Seasonal variation of viral infections between the eastern honey bee (Apis cerana) and the western honey bee (Apis mellifera)15
Hidden heterogeneity and co‐occurrence networks of soil prokaryotic communities revealed at the scale of individual soil aggregates15
Porcine deltacoronavirus infection alters bacterial communities in the colon and feces of neonatal piglets14
Metagenomic analysis and antimicrobial activity of two fermented milk kefir samples14
Sustainable production of FAEE biodiesel using the oleaginous yeast Yarrowia lipolytica14
Nutrient availability in tropical caves influences the dynamics of microbial biomass14
Detection of methicillin‐resistant Staphylococcus aureus persistence in osteoblasts using imaging flow cytometry14
Pantoea ananatis carotenoid production confers toxoflavin tolerance and is regulated by Hfq‐controlled quorum sensing14
A novel way to synthesize pantothenate in bacteria involves β‐alanine synthase present in uracil degradation pathway14
Effect of storage, temperature, and extraction kit on the phylogenetic composition detected in the human milk microbiota13
Effect of metabolosome encapsulation peptides on enzyme activity, coaggregation, incorporation, and bacterial microcompartment formation13
The production of isoprene from cellulose using recombinant Clostridium cellulolyticum strains expressing isoprene synthase13
Vertical structure of the bacterial diversity in meromictic Fayetteville Green Lake13
Comparative analysis and gut bacterial community assemblages of grass carp and crucian carp in new lineages from the Dongting Lake area13
Trophic preferences of the pathogen Ralstonia solanacearum and consequences on its growth in xylem sap13
Links between S‐adenosylmethionine and Agr‐based quorum sensing for biofilm development in Listeria monocytogenes EGD‐e13
Characterization of the biocontrol activity of three bacterial isolates against the phytopathogen Erwinia amylovora13
Dynamic change of the gastrointestinal bacterial ecology in cows from birth to adulthood13
Isolation and characterization of fast‐growing green snow bacteria from coastal East Antarctica13
Antifungal mechanism of Bacillus amyloliquefaciens strain GKT04 against Fusarium wilt revealed using genomic and transcriptomic analyses13
Development and clinical validation of a droplet digital PCR assay for detecting Acinetobacter baumannii and Klebsiella pneumoniae in patients with suspected bloodstream infections13
Comparison of swab types for collection and analysis of microorganisms13
Living in a bottle: Bacteria from sediment‐associated Mediterranean waste and potential growth on polyethylene terephthalate12
Spatially explicit depiction of a floral epiphytic bacterial community reveals role for environmental filtering within petals12
Cultivation of the gut bacterium Prevotella copri DSM 18205T using glucose and xylose as carbon sources12
Synthetic pro‐peptide design to enhance the secretion of heterologous proteins by Saccharomyces cerevisiae12
Expression of degQ gene and its effect on lipopeptide production as well as formation of secretory proteases in Bacillus subtilis strains12
Biofilm formation in Acinetobacter baumannii was inhibited by PAβN while it had no association with antibiotic resistance12
Enrichment of novel Verrucomicrobia, Bacteroidetes, and Krumholzibacteria in an oxygen‐limited methane‐ and iron‐fed bioreactor inoculated with Bothnian Sea sediments12
Deletion of Rap‐Phr systems in Bacillus subtilis influences in vitro biofilm formation and plant root colonization12
Combining in vitro and in vivo screening to identify efficient Pseudomonas biocontrol strains against the phytopathogenic bacterium Ralstonia solanacearum12
Transposon mutagenesis in Mycobacterium kansasii links a small RNA gene to colony morphology and biofilm formation and identifies 9,885 intragenic insertions that do not compromise colony outgr12
Gut dysbiosis and clinical phases of pancolitis in patients with ulcerative colitis12
Community diversity metrics, interactions, and metabolic functions of bacteria associated with municipal solid waste landfills at different maturation stages12
Shining light on multi‐drug resistant Candida auris: Ultraviolet‐C disinfection, wavelength sensitivity, and prevention of biofilm formation of an emerging yeast pathogen12
Prevalence of insertion sequence elements in plasmids relating to mgrB gene disruption causing colistin resistance in Klebsiella pneumoniae11
Insights into the mechanism of cyanobacteria removal by the algicidal fungi Bjerkandera adusta and Trametes versicolor11
Drug repurposing: Antimicrobial and antibiofilm effects of penfluridol against Enterococcus faecalis11
Virioplankton distribution in the tropical western Pacific Ocean in the vicinity of a seamount11
Differences in the intestinal microbiota between insecticide‐resistant and ‐sensitive Aedes albopictus based on full‐length 16S rRNA sequencing11
Recombinant spider silk coatings functionalized with enzymes targeting bacteria and biofilms11
Magnesium depletion extends fission yeast lifespan via general amino acid control activation11
Deep tillage combined with biofertilizer following soil fumigation improved chrysanthemum growth by regulating the soil microbiome11
Optimization of nitrogen source supply for enhanced biosynthesis and quality of poly(3‐hydroxybutyrate‐co‐3‐hydroxyvalerate) by extremely halophilic archaeon Haloferax mediterranei11
Geographical separation and physiology drive differentiation of microbial communities of two discrete populations of the bat Leptonycteris yerbabuenae10
Proteomic analysis of Aspergillus niger 3.316 under heat stress10
Hexyl gallate for the control of citrus canker caused by Xanthomonas citri subsp citri10
Global trends of Pseudomonas aeruginosa biofilm research in the past two decades: A bibliometric study10
Evaluation and characterization of the predicted diguanylate cyclase‐encoding genes in Pseudomonas aeruginosa10
Metabolic potential of the moderate halophile Yangia sp. ND199 for co‐production of polyhydroxyalkanoates and exopolysaccharides10
Patterns of the fecal microbiota in the Juan Fernández fur seal (Arctocephalus philippii)10
Characteristics of Planococcus antioxidans sp. nov., an antioxidant‐producing strain isolated from the desert soil in the Qinghai–Tibetan Plateau10
PasT of Escherichia coli sustains antibiotic tolerance and aerobic respiration as a bacterial homolog of mitochondrial Coq1010
Bacterioplankton community variation in Bohai Bay (China) is explained by joint effects of environmental and spatial factors10
Bacterioplankton response to nitrogen and dissolved organic matter produced from salmon mucus10
Diversity and characteristics of culturable endophytic bacteria from Passiflora edulis seeds9
The bacterial and fungal community composition in time and space in the nest mounds of the ant Formicaexsecta (Hymenoptera: Formicidae)9
Machine learning modeling of the effects of media formulated with various yeast extracts on heterologous protein production in Escherichia coli9
Pentaplex real‐time PCR for differential detection of Yersinia pestis and Y. pseudotuberculosis and application for testing fleas collected during plague epizootics9
Sporulation: A response to starvation in the fission yeast Schizosaccharomyces pombe9
Multifunctional SEVA shuttle vectors for actinomycetes and Gram‐negative bacteria9
Microbial biominers: Sequential bioleaching and biouptake of metals from electronic scraps9
Interaction of two strongly divergent archaellins stabilizes the structure of the Halorubrum archaellum9
Application of a semi‐automatic, intensive follow‐up for improving efficacy and adherence of Helicobacter pylori eradication therapy: A randomized controlled trial9
Comparative transcriptome and phenotype analysis revealed the role and mechanism of ompR in the virulence of fish pathogenic Aeromonas hydrophila9
Variations in gut bacterial communities between lesser white‐fronted geese wintering at Caizi and Shengjin lakes in China9
Microbial composition of enigmatic bird parasites: Wolbachia and Spiroplasma are the most important bacterial associates of quill mites (Acariformes: Syringophilidae)9
The genome sequence of hairy root Rhizobium rhizogenes strain LBA9402: Bioinformatics analysis suggests the presence of a new opine system in the agropine Ri plasmid9
No man's land: Species‐specific formation of exclusion zones bordering Actinomyces graevenitzii microcolonies in nanoliter cultures9
0.061964988708496