OOIR: Observatory of International Research

Papers

(The median citation count of Nucleus is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)

Article	Citations
Chromatin accessibility: methods, mechanisms, and biological insights	39
Mechanical determinants of chromatin topology and gene expression	25
Gaussian curvature dilutes the nuclear lamina, favoring nuclear rupture, especially at high strain rate	25
HP1β carries an acidic linker domain and requires H3K9me3 for phase separation	22
MeCP2-induced heterochromatin organization is driven by oligomerization-based liquid–liquid phase separation and restricted by DNA methylation	20
Nuclear envelope mechanobiology: linking the nuclear structure and function	17
Heterochromatin organization and phase separation	16
4DNvestigator: time series genomic data analysis toolbox	16
Mechanism of action of the SWI/SNF family complexes	15
The chromatin signatures of enhancers and their dynamic regulation	13
Workshop on RanBP2/Nup358 and acute necrotizing encephalopathy	12
Transcriptional condensates and phase separation: condensing information across scales and mechanisms	12
Transcription factor condensates and signaling driven transcription	11
Physical constraints in polymer modeling of chromatin associations with the nuclear periphery at kilobase scale	10
Image analysis workflows to reveal the spatial organization of cell nuclei and chromosomes	10
PRR14 organizes H3K9me3-modified heterochromatin at the nuclear lamina	9
Emergent microenvironments of nucleoli	9
Evolution and diversification of the nuclear envelope	7
Architectural control of mesenchymal stem cell phenotype through nuclear actin	7
Nuclear envelope budding and its cellular functions	7
Where and when to start: Regulating DNA replication origin activity in eukaryotic genomes	7
Through the lens of phase separation: intrinsically unstructured protein and chromatin looping	7
Mammalian nuclear speckles exhibit stable association with chromatin: a biochemical study	6
Aberrant chromatin organization at the nexus of laminopathy disease pathways	6
Spelling out the roles of individual nucleoporins in nuclear export of mRNA	6

Phase separation in DNA double-strand break response	6
Differential contributions of nuclear lamina association and genome compartmentalization to gene regulation	5
Lamin B1 overexpression alters chromatin organization and gene expression	5
Plant nuclear envelope as a hub connecting genome organization with regulation of gene expression	5
Coilin and Cajal bodies	5
Histone locus bodies: a paradigm for how nuclear biomolecular condensates control cell cycle regulated gene expression	5
Prelamin A and ZMPSTE24 in premature and physiological aging	5
Spatially coherent diffusion of human RNA Pol II depends on transcriptional state rather than chromatin motion	5
PML Nuclear bodies: the cancer connection and beyond	5
Narrowing down the candidates of beneficial A-to-I RNA editing by comparing the recoding sites with uneditable counterparts	5
Stochastic gene expression and chromosome interactions in protecting the human active X from silencing by XIST	4
Modeling the 3D genome of plants	4
Cell cycle control of kinetochore assembly	4
In situ nuclear matrix preparation in Drosophila melanogaster embryos/tissues and its use in studying the components of nuclear architecture	4
Filament assembly of the C. elegans lamin in the absence of helix 1A	4
Beyond ribosome biogenesis: noncoding nucleolar RNAs in physiology and tumor biology	3
Sculpting nuclear envelope identity from the endoplasmic reticulum during the cell cycle	3
The perinucleolar compartment: structure, function, and utility in anti-cancer drug development	3
The lamin A/C Ig-fold undergoes cell density-dependent changes that alter epitope binding	3
The interplay between viral molecular mimicry and host chromatin dynamics	3
Nuclear pore dysfunction and disease: a complex opportunity	3