Gut Microbes

Article	Citations
Technical versus biological variability in a synthetic human gut community	161
Limosilactobacillus reuteri DS0384 promotes intestinal epithelial maturation via the postbiotic effect in human intestinal organoids and infant mice	139
Limosilactobacillus reuteri - a probiotic gut commensal with contextual impact on immunity	139
Epidemiological and microbiome associations of Clostridioides difficile carriage in infancy and early childhood	115
Meta-analysis reveals Helicobacter pylori mutual exclusivity and reproducible gastric microbiome alterations during gastric carcinoma progression	114
Interlink between the gut microbiota and inflammation in the context of oxidative stress in Alzheimer’s disease progression	110
Unveiling Candida albicans intestinal carriage in healthy volunteers: the role of micro- and mycobiota, diet, host genetics and immune response	81
Methodological challenges in neonatal microbiome research	77
EspH interacts with the host active Bcr related (ABR) protein to suppress RhoGTPases	76
Detecting host responses to microbial stimulation using primary epithelial organoids	75
A foundational approach to culture and analyze malnourished organoids	66
Oxygen concentration modulates colibactin production	63
Unique Pakistani gut microbiota highlights population-specific microbiota signatures of type 2 diabetes mellitus	61
Modeling spatial interaction networks of the gut microbiota	60
Interactions and substrate selectivity within the SctRST complex of the type III secretion system of enteropathogenic Escherichia coli	59
The development of live biotherapeutics against Clostridioides difficile infection towards reconstituting gut microbiota	58
Gut microbiota composition as a candidate risk factor for dimethyl fumarate-induced lymphopenia in multiple sclerosis	57
Intestinal microbiota modulates pancreatic carcinogenesis through intratumoral natural killer cells	56
Children and adolescents with attention deficit hyperactivity disorder and autism spectrum disorder share distinct microbiota compositions	55
Functional effects of human milk oligosaccharides (HMOs)	53
MlrA, a MerR family regulator in Vibrio cholerae , senses the anaerobic signal in the small intestine of the host to promote bacterial intestinal colonization	52
Multiomic spatial analysis reveals a distinct mucosa-associated virome	51
Fiber mixture-specific effect on distal colonic fermentation and metabolic health in lean but not in prediabetic men	49
E. coli Common pili promote the fitness and virulence of a hybrid aEPEC/ExPEC strain within diverse host environments	49
Gut microbiota-motility interregulation: insights from in vivo, ex vivo and in silico studies	49

In vitro adhesion, pilus expression, and in vivo amelioration of antibiotic-induced microbiota disturbance by Bifidobacterium	49
Prolonged oral antimicrobial administration prevents doxorubicin-induced loss of active intestinal stem cells	48
The human gut serves as a reservoir of hypervirulent Klebsiella pneumoniae	48
L. rhamnosus CNCM I-3690 survival, adaptation, and small bowel microbiome impact in human	48
Microbial-host-isozyme: unveiling a new era in microbiome–host interaction	47
Campylobacter jejuni benefits from the bile salt deoxycholate under low-oxygen condition in a PldA dependent manner	47
Host-mycobiome metabolic interactions in health and disease	47
Lactobacillus johnsonii N6.2 phospholipids induce immature-like dendritic cells with a migratory-regulatory-like transcriptional signature	45
Escherichia coli triggers α-synuclein pathology in the LRRK2 transgenic mouse model of PD	44
Dynamic associations between the respiratory tract and gut antibiotic resistome of patients with COVID-19 and its prediction power for disease severity	44
Myeloid-derived suppressor cells prevent disruption of the gut barrier, preserve microbiota composition, and potentiate immunoregulatory pathways in a rat model of experimental autoimmune encephalomye	43
Loss-of-function SLC30A2 mutants are associated with gut dysbiosis and alterations in intestinal gene expression in preterm infants	42
Compensatory intestinal antibody response against pro-inflammatory microbiota after bariatric surgery	42
Dietary fiber-based regulation of bile salt hydrolase activity in the gut microbiota and its relevance to human disease	42
Salmonella enterica subsp. II serovar 4,5,12:a:- may cause gastroenteritis infections in humans	41
Gut microbiota: a non-target victim of pesticide-induced toxicity	41
Microbial bile salt hydrolase activity influences gene expression profiles and gastrointestinal maturation in infant mice	41
Helicobacter pylori PldA modulates TNFR1-mediated p38 signaling pathways to regulate macrophage responses for its survival	40
Synergism of Fusobacterium periodonticum and N-nitrosamines promote the formation of EMT subtypes in ESCC by modulating Wnt3a palmitoylation	40
Normalization of short-chain fatty acid concentration by bacterial count of stool samples improves discrimination between eubiotic and dysbiotic gut microbiota caused by Clostridioides	40
Clostridioides difficile aggravates dextran sulfate solution (DSS)-induced colitis by shaping the gut microbiota and promoting neutrophil recruitment	40
Mechanisms of intestinal dysbiosis: new insights into tuft cell functions	39
Elucidating the role of diet in maintaining gut health to reduce the risk of obesity, cardiovascular and other age-related inflammatory diseases: recent challenges and future recommendations	39
Oral histidine affects gut microbiota and MAIT cells improving glycemic control in type 2 diabetes patients	39
Muropeptides and muropeptide transporters impact on host immune response	38
The neonatal gut microbiome and global health	38
Prevention and cure of murine C. difficile infection by a Lachnospiraceae strain	37
Dysrupted microbial tryptophan metabolism associates with SARS-CoV-2 acute inflammatory responses and long COVID	36
A gut feeling of statin	36
Microbiota during pregnancy and early life: role in maternal−neonatal outcomes based on human evidence	36
Lactobacillus acidophilus ameliorates cholestatic liver injury through inhibiting bile acid synthesis and promoting bile acid excretion	35
The influence of the gut microbiome on ovarian aging	35
Controlled infection with cryopreserved human hookworm induces CTLA-4 expression on Tregs and upregulates tryptophan metabolism	34
Microbiota and plasticity of antigen-presenting ILC3s: impact on antitumor immune response	33
Faecal (or intestinal) microbiota transplant: a tool for repairing the gut microbiome	33
Intestinal flora: a potential pathogenesis mechanism and treatment strategy for type 1 diabetes mellitus	33
Cytolethal distending toxin B inoculation leads to distinct gut microtypes and IBS-D-like microRNA-mediated gene expression changes in a rodent model	33
Modulation of chronic obstructive pulmonary disease progression by antioxidant metabolites from Pediococcus pentosaceus : enhancing gut probiotics abundance and the tryp	32
The effects of gut microbiota on appetite regulation and the underlying mechanisms	32
Fusobacterium nucleatum promotes inflammatory and anti-apoptotic responses in colorectal cancer cells via ADP-heptose release and ALPK1/TIFA axis activation	32
Recipient microbiome-related features predicting metabolic improvement following fecal microbiota transplantation in adults with severe obesity and metabolic syndrome: a secondary analysis of a phase	32
Genomic island-encoded LmiA regulates acid resistance and biofilm formation in enterohemorrhagic Escherichia coli O157:H7	31
Microbiome 2.0: lessons from the 2024 Gut Microbiota for Health World Summit	31
Gut microbiota and microbial metabolites for osteoporosis	31
Immunogenicity and cross-protective efficacy induced by delayed attenuated Salmonella with regulated length of lipopolysaccharide in mice	31
Bile acid profiling as an effective biomarker for staging in pediatric inflammatory bowel disease	31
Gut microbial features and dietary fiber intake predict gut microbiota response to resistant starch supplementation	30
Gut microbiota dysbiosis-related susceptibility to nontuberculous mycobacterial lung disease	30
Antigenic operon fragmentation and diversification mechanism in Bacteroidota impacts gut metagenomics and pathobionts in Crohn's disease microlesions	30
Spatial transcriptomic analysis reveals local effects of intratumoral fusobacterial infection on DNA damage and immune signaling in rectal cancer	30

ChiA: a major player in the virulence of Crohn’s disease-associated adherent and invasive Escherichia coli (AIEC)	30
Gut microbiota depletion delays somatic peripheral nerve development and impairs neuromuscular junction maturation	30
Probiotics and microbial metabolites maintain barrier and neuromuscular functions and clean protein aggregation to delay disease progression in TDP43 mutation mice	30
Gut microbiota CLA and IL-35 induction in macrophages through Gαq/11-mediated STAT1/4 pathway: an animal-based study	29
The IBS bug-pain connection	29
Sialic acid-based probiotic intervention in lactating mothers improves the neonatal gut microbiota and immune responses by regulating sialylated milk oligosaccharide synthesis via the gut–breast axis	29
The early life exposome and autism risk: a role for the maternal microbiome?	28
Effects of Prevotella copri on insulin, gut microbiota and bile acids	28
Adaptation to tolerate high doses of arabinoxylan is associated with fecal levels of Bifidobacterium longum	28
Opioid-induced dysbiosis of maternal gut microbiota during gestation alters offspring gut microbiota and pain sensitivity	28
Gut microbiome profiles to exclude the diagnosis of hepatic encephalopathy in patients with cirrhosis	27
Modulation of Alzheimer’s disease brain pathology in mice by gut bacterial depletion: the role of IL-17a	27
Abnormalities in gut virome signatures linked with cognitive impairment in older adults	27
Correction	27
Dysfunctional mucus structure in cystic fibrosis increases vulnerability to colibactin-mediated DNA adducts in the colon mucosa	27
Fecal virus-like particles are sufficient to reduce necrotizing enterocolitis	26
Incremental increases in physiological fluid shear progressively alter pathogenic phenotypes and gene expression in multidrug resistant Salmonella	26
Unexpected vulnerability of Enterococcus faecium to polymyxin B under anaerobic condition	26
Heterogeneous associations of gut microbiota with Crohn’s disease activity	26
Hyperbaric oxygen augments susceptibility to C. difficile infection by impairing gut microbiota ability to stimulate the HIF-1α-IL-22 axis in ILC3	26
Dietary modulation of gut microbiota affects susceptibility to drug-induced liver injury	26
Exercise-changed gut mycobiome as a potential contributor to metabolic benefits in diabetes prevention: an integrative multi-omics study	25
Heterologous expression and antimicrobial potential of class II bacteriocins	25
Bacteriophages from treatment-naïve type 2 diabetes individuals drive an inflammatory response in human co-cultures of dendritic cells and T cells	25
Pasteurized Akkermansia muciniphila improves irritable bowel syndrome-like symptoms and related behavioral disorders in mice	25
Fecal let-7b and miR-21 directly modulate the intestinal microbiota, driving chronic inflammation	25
Mechanisms of gut bacterial metabolism of dietary polyphenols into bioactive compounds	25
Candida tropicalis -derived vitamin B3 exerts protective effects against intestinal inflammation by promoting IL-17A/IL-22-dependent epithelial barrier function	25
Effect of diet on the evolution of gut commensal bacteria	25
Fecal microbiota transplantation significantly improved respiratory failure of amyotrophic lateral sclerosis	25
The role of microbial indole metabolites in tumor	24
GPR120 promotes neutrophil control of intestinal bacterial infection	24
Vaccines against extraintestinal pathogenic Escherichia coli (ExPEC): progress and challenges	24
A high fiber diet or supplementation with Lactococcus lactis subspecies cremoris to pregnant mice confers protection against intestinal injury in adult offspring	24
Parity modulates impact of BMI and gestational weight gain on gut microbiota in human pregnancy	24
Bacterial flagellin is a dominant, stable innate immune activator in the gastrointestinal contents of mice and rats	23
Gut microbiome-associated predictors as biomarkers of response to advanced therapies in inflammatory bowel disease: a systematic review	23
Intestinal group 1 innate lymphoid cells drive macrophage-induced inflammation and endocrine defects in obesity and promote insulinemia	23
Immune evasion and persistence in enteric bacterial pathogens	23
Inhibition of intestinal FXR activity as a possible mechanism for the beneficial effects of a probiotic mix supplementation on lipid metabolism alterations and weight gain in mice fed a high fat diet	23
Butyrate reduces adherent-invasive E. coli -evoked disruption of epithelial mitochondrial morphology and barrier function: involvement of free fatty acid receptor 3	23
Diverse but desolate landscape of gut microbial azoreductases: A rationale for idiopathic IBD drug response	23
Gut-microbiota prompt activation of natural killer cell on alcoholic liver disease	23
Distinctive patterns of sulfide- and butyrate-metabolizing bacteria after bariatric surgery: potential implications for colorectal cancer risk	23
Preterm infants at low risk for early-onset sepsis differ in early fecal microbiome assembly	23
Linking serum vitamin D levels with gut microbiota after 1-year lifestyle intervention with Mediterranean diet in patients with obesity and metabolic syndrome: a nested cross-sectional and prospective	23
How important are fatty acids in human health and can they be used in treating diseases?	22
How longitudinal data can contribute to our understanding of host genetic effects on the gut microbiome	22
Dietary Isoflavones Alter Gut Microbiota and Lipopolysaccharide Biosynthesis to Reduce Inflammation	22
Gut-derived β-amyloid: Likely a centerpiece of the gut–brain axis contributing to Alzheimer’s pathogenesis	22
Divergence of gut bacteria through the selection of genomic variants implicated in the metabolism of sugars, amino acids, and purines by small extracellular vesicles in milk	22
New treatment approaches for Clostridioides difficile infections: alternatives to antibiotics and fecal microbiota transplantation	22
Hydrogen peroxide in breast milk is crucial for gut microbiota formation and myelin development in neonatal mice	22
Differential response to prolonged amoxicillin treatment: long-term resilience of the microbiome versus long-lasting perturbations in the gut resistome	22
Gut microbiota metabolite indole-3-acetic acid maintains intestinal epithelial homeostasis through mucin sulfation	22
The importance of the gut microbiome in the pathogenesis and transmission of SARS-CoV-2	22
Detection of Klebsiella pneumoniae human gut carriage: a comparison of culture, qPCR, and whole metagenomic sequencing methods	21
Weizmannia coagulans BCF-01: a novel gastrogenic probiotic for Helicobacter pylori infection control	21
Microbiota-directed biotherapeutics: considerations for quality and functional assessment	21
Fecal microbiota and bile acids in IBD patients undergoing screening for colorectal cancer	21
Host miR-129-5p reverses effects of ginsenoside Rg1 on morphine reward possibly mediated by changes in B. vulgatus and serotonin metabolism in hippocampus	20
The unforeseen intracellular lifestyle of Enterococcus faecalis in hepatocytes	20
Gut microbiota in nonalcoholic fatty liver disease: a PREDIMED-Plus trial sub analysis	20
From intestinal colonization to systemic infections: Candida albicans translocation and dissemination	20
Microbiome and spatially resolved metabolomics analysis reveal the anticancer role of gut Akkermansia muciniphila by crosstalk with intratumoral microbiota and reprogramming tumoral metabolism in mice	20
Engineered Escherichia coli Nissle 1917 with urate oxidase and an oxygen-recycling system for hyperuricemia treatment	20
Fecal virome transfer improves proliferation of commensal gut Akkermansia muciniphila and unexpectedly enhances the fertility rate in laboratory mice	20
Gut microbiota links to serum ferritin and cognition	19
Lactiplantibacillus plantarum 299v supplementation modulates β-cell ER stress and antioxidative defense pathways and prevents type 1 diabetes in gluten-free BioBreeding rats	19
Akkermansia muciniphila reduces susceptibility to Listeria monocytogenes infection in mice fed a high-fat diet	19
Fusobacterium nucleatum promotes esophageal squamous cell carcinoma progression and chemoresistance by enhancing the secretion of chemotherapy-induced senescence-associated secretor	19
Rural environment reduces allergic inflammation by modulating the gut microbiota	19
Mucus, commensals, and the immune system	19
Short-term mucosal disruption enables colibactin-producing E. coli to cause long-term perturbation of colonic homeostasis	19
Intestinal bacteria and colorectal cancer: etiology and treatment	19
The probiotic Bacillus subtilis BS50 decreases gastrointestinal symptoms in healthy adults: a randomized, double-blind, placebo-controlled trial	19
Exosomal-miR-129-2-3p derived from Fusobacterium nucleatum -infected intestinal epithelial cells promotes experimental colitis through regulating TIMELESS-mediated cellu	19
Depletion of butyrate-producing microbes of the Firmicutes predicts nonresponse to FMT therapy in patients with recurrent Clostridium difficile infection	19
Progress of linking gut microbiota and musculoskeletal health: casualty, mechanisms, and translational values	18
Microbial succinate promotes the response to metformin by upregulating secretory immunoglobulin a in intestinal immunity	18

A dietary carbohydrate – gut Parasutterella – human fatty acid biosynthesis metabolic axis in obesity and type 2 diabetes	18
Intestinal TLR4 deletion exacerbates acute pancreatitis through gut microbiota dysbiosis and Paneth cells deficiency	18
The gut-joint axis mediates the TNF-induced RA process and PBMT therapeutic effects through the metabolites of gut microbiota	18
Synergistic and off-target effects of bacteriocins in a simplified human intestinal microbiome: implications for Clostridioides difficile infection control	18
Utilization of glycosaminoglycans by the human gut microbiota: participating bacteria and their enzymatic machineries	18
Periodontitis pathogen Porphyromonas gingivalis promotes pancreatic tumorigenesis via neutrophil elastase from tumor-associated neutrophils	18
Novel strain of Pseudoruminococcus massiliensis possesses traits important in gut adaptation and host-microbe interactions	18
Loss of claudin-3 expression increases colitis risk by promoting Gut Dysbiosis	18
Gut microbiota in mucosa and feces of newly diagnosed, treatment-naïve adult inflammatory bowel disease and irritable bowel syndrome patients	18
The double-edged sword of probiotic supplementation on gut microbiota structure in Helicobacter pylori management	18
Lachnospiraceae-bacterium alleviates ischemia-reperfusion injury in steatotic donor liver by inhibiting ferroptosis via the Foxo3-Alox15 signaling pathway	17
Intracellular glycogen accumulation by human gut commensals as a niche adaptation trait	17
Lactiplantibacillus plantarum (CECT7484 and CECT7485) and Pedioccoccus acidilactici (CECT7483) enhance actin cytoskeleton and CYP1A1 expression restor	17
Gut microbiome diversity, variability, and latent community types compared with shifts in body weight during the freshman year of college in dormitory-housed adolescents	17
Potential binding modes of the gut bacterial metabolite, 5-hydroxyindole, to the intestinal L-type calcium channels and its impact on the microbiota in rats	17
Colorectal cancer–associated T cell receptor repertoire abnormalities are linked to gut microbiome shifts and somatic cell mutations	17
Assembly of novel microbial genomes from gut metagenomes of rhesus macaque ( Macaca mulatta )	17
Targeting gut microbiota: new therapeutic opportunities in multiple sclerosis	17
Pharmacomicrobiomics of cell-cycle specific anti-cancer drugs – is it a new perspective for personalized treatment of cancer patients?	17
An observational investigation of the faecal microbiota and metabonome of gastrostomy fed children, on blended and formula diets	17
Maternal-infant antibiotic resistance genes transference: what do we know?	17
Successful weight regain attenuation by autologous fecal microbiota transplantation is associated with non-core gut microbiota changes during weight loss; randomized controlled trial	17
Bile acids as modulators of gut microbiota composition and function	17
Disordered development of gut microbiome interferes with the establishment of the gut ecosystem during early childhood with atopic dermatitis	16
Engraftment of aging-related human gut microbiota and the effect of a seven-species consortium in a pre-clinical model	16
Maternal probiotic exposure enhances CD8 T cell protective neonatal immunity and modulates offspring metabolome to control influenza virus infection	16
Implications of microbe-derived ɣ-aminobutyric acid (GABA) in gut and brain barrier integrity and GABAergic signaling in Alzheimer’s disease	16
Human breastmilk-derived Bifidobacterium longum subsp. infantis CCFM1269 regulates bone formation by the GH/IGF axis through PI3K/AKT path	16
Desulfovibrio vulgaris flagellin exacerbates colorectal cancer through activating LRRC19/TRAF6/TAK1 pathway	16
Metabolome-associated psychological comorbidities improvement in irritable bowel syndrome patients receiving a probiotic	16
Gut microbiota alteration after cholecystectomy contributes to post-cholecystectomy diarrhea via bile acids stimulating colonic serotonin	15
Indole-3-acetic acid alleviates DSS-induced colitis by promoting the production of R-equol from Bifidobacterium pseudolongum	15
The effect of vitamin D supplementation on the gut microbiome in older Australians – Results from analyses of the D-Health Trial	15
Effects of breastfeeding on children’s gut colonization with multidrug-resistant Enterobacterales in peri-urban Lima, Peru	15
Emerging issues in probiotic safety: 2023 perspectives	15
Effect of synbiotic supplementation on immune parameters and gut microbiota in healthy adults: a double-blind randomized controlled trial	15
Isolation and characterization of a novel lytic Parabacteroides distasonis bacteriophage φPDS1 from the human gut	15
Apyrase decreases phage induction and Shiga toxin release from E. coli O157:H7 and has a protective effect during infection	15
The gut microbiota in breast cancer development and treatment: The good, the bad, and the useful!	15
Next-generation probiotics – do they open new therapeutic strategies for cancer patients?	15
Vitamin D influences gut microbiota and acetate production in zebrafish ( Danio rerio ) to promote intestinal immunity against invading pathogens	15
Statistical normalization methods in microbiome data with application to microbiome cancer research	15
The crosstalk between efflux pump and resistance gene mutation in Helicobacter pylori	15
High throughput genome scale modeling predicts microbial vitamin requirements contribute to gut microbiome community structure	15
Therapeutic potential of Clostridium butyricum anticancer effects in colorectal cancer	15
Colorectal cancer and gut microbiota studies in China	15
Microbial metabolites as modulators of the infant gut microbiome and host-microbial interactions in early life	15
A metabolically engineered bacterium controls autoimmunity and inflammation by remodeling the pro-inflammatory microenvironment	15
The cnf1 gene is associated with an expanding Escherichia coli ST131 H 30Rx/C2 subclade and confers a compe	14
Cytotoxic necrotizing factor 1 hinders colon tumorigenesis induced by colibactin-producing Escherichia coli in Apc Min/+	14
Maternal milk fat globule membrane enriched gut L. murinus and circulating SCFAs to improve placental efficiency and fetal development in intrauterine growth restricted	14
Fecal carriage of vanB antibiotic resistance gene affects adipose tissue function under vancomycin use	14
Obesity is the main driver of altered gut microbiome functions in the metabolically unhealthy	14
Helicobacter pylori employs a general protein glycosylation system for the modification of outer membrane adhesins	14
ArcB orchestrates the quorum-sensing system to regulate type III secretion system 1 in Vibrio parahaemolyticus	14
AhR/IL-22 pathway as new target for the treatment of post-infectious irritable bowel syndrome symptoms	14
Fatty acids produced by the gut microbiota dampen host inflammatory responses by modulating intestinal SUMOylation	14
Increasing adherence to the Mediterranean diet and lifestyle is associated with reduced fecal calprotectin and intra-individual changes in microbial composition of healthy subjects	14
Artificial intelligence-based personalized diet: A pilot clinical study for irritable bowel syndrome	14
Mouse models for bacterial enteropathogen infections: insights into the role of colonization resistance	14
Failure of colonization following gut microbiota transfer exacerbates DSS-induced colitis	14
Circulating microbiome in patients with portal hypertension	14
Dysbiotic but nonpathogenic shift in the fecal mycobiota of patients with rheumatoid arthritis	14
Cesarean section induced dysbiosis promotes type 2 immunity but not oxazolone-induced dermatitis in mice	13
Bezlotoxumab prevents extraintestinal organ damage induced by Clostridioides difficile infection	13
Obesity is associated with a distinct brain-gut microbiome signature that connects Prevotella and Bacteroides to the brain’s reward center	13
Gut virome profiling identifies an association between temperate phages and colorectal cancer promoted by Helicobacter pylori infection	13
The gut-microbiota-brain axis in a Spanish population in the aftermath of the COVID-19 pandemic: microbiota composition linked to anxiety, trauma, and depression profiles	13
Targeting nonalcoholic fatty liver disease via gut microbiome-centered therapies	13
Alterations in intestinal Archaea composition in pediatric patients with Crohn’s disease based on next-generation sequencing – a pilot study	13
Linkage analysis identifies novel genetic modifiers of microbiome traits in families with inflammatory bowel disease	13
An in vitro intestinal model captures immunomodulatory properties of the microbiota in inflammation	13
Gut feelings: the relations between depression, anxiety, psychotropic drugs and the gut microbiome	13
Translating neonatal microbiome science into commercial innovation: metabolism of human milk oligosaccharides as a basis for probiotic efficacy in breast-fed infants	13
Obesity enriches for tumor protective microbial metabolites and treatment refractory cells to confer therapy resistance in PDAC	13
Diet–microbial cross–talk underlying increased visceral perception	13
Letter regarding “Effect of synbiotic supplementation on immune parameters and gut microbiota in healthy adults: a double-blind randomized controlled trial”	13
Allogeneic hematopoietic cell transplantation, the microbiome, and graft-versus-host disease	13
Estradiol mediates colonic epithelial protection in aged mice after stroke and is associated with shifts in the gut microbiome	13
Metaproteomic assessment of gut microbial and host functional perturbations in Helicobacter pylori -infected patients subjected to an antimicrobial protocol	13
Regulation of flagellar motility and biosynthesis in enterohemorrhagic Escherichia coli O157:H7	13
Gut-bacteria derived membrane vesicles and host metabolic health: a narrative review	12
Prebiotic utilisation provides Lactiplantibacillus plantarum a competitive advantage in vitro , but is not reflected by an increased intes	12
Multimodal metagenomic analysis reveals microbial single nucleotide variants as superior biomarkers for early detection of colorectal cancer	12
MRGM: an enhanced catalog of mouse gut microbial genomes substantially broadening taxonomic and functional landscapes	12
Inflammasome activation links enteric Salmonella Typhimurium infection to a rapid, cytokine-dependent increase in intestinal mucin release	12
KRAS mutations promote the intratumoral colonization of enterotoxigenic bacteroides fragilis in colorectal cancer through the regulation of the miRNA3655/SURF6/IRF7/IFNβ axis	12
Gut microbiota-palmitoleic acid-interleukin-5 axis orchestrates benzene-induced hematopoietic toxicity	12
Gut microbiota regulates host melatonin production through epithelial cell MyD88	12
BaiJ and BaiB are key enzymes in the chenodeoxycholic acid 7α-dehydroxylation pathway in the gut microbe Clostridium scindens ATCC 35704	12
Multi-strain probiotics during pregnancy in women with obesity influence infant gut microbiome development: results from a randomized, double-blind placebo-controlled study	12
Citrobacter rodentium possesses a functional type II secretion system necessary for successful host infection	12
Pseudocin 196, a novel lantibiotic produced by Bifidobacterium pseudocatenulatum elicits antimicrobial activity against clinically relevant pathogens	12
Type 2 diabetes, gut microbiome, and systems biology: A novel perspective for a new era	12
The colibactin-producing Escherichia coli alters the tumor microenvironment to immunosuppressive lipid overload facilitating colorectal cancer progression and chemoresis	12