Rice

Article	Citations
Salicylic Acid Acts Upstream of Auxin and Nitric Oxide (NO) in Cell Wall Phosphorus Remobilization in Phosphorus Deficient Rice	84
Identification of Novel Quantitative Trait Loci for Culm Thickness of Rice Derived from Strong-Culm Landrace in Japan, Omachi	75
Gγ-protein GS3 Function in Tight Genetic Relation with OsmiR396/GS2 to Regulate Grain Size in Rice	67
Constant Illumination Boosts Rice Immunity via the Nicotinamide Mononucleotide Signaling Pathway: A Mechanistic Exploration	60
Simultaneous Enhancement of iron Deficiency Tolerance and Iron Accumulation in Rice by Combining the Knockdown of OsHRZ Ubiquitin Ligases with the Introduction of Engineered Ferric-chelate Reductase	50
Can the Wild Perennial, Rhizomatous Rice Species Oryza longistaminata be a Candidate for De Novo Domestication?	43
MORE FLORET1 Interacts with C-type Replication Protein A Complex and Regulates Male Meiosis in Rice	40
Revealing Genomic Traits and Evolutionary Insights of Oryza officinalis from Southern China Through Genome Assembly and Transcriptome Analysis	40
Small Papillae Regulated by SPD25 are Critical for Balancing Photosynthetic CO2 Assimilation and Water Loss in Rice	40
Arbuscular Mycorrhizal Fungi Increase Blast Resistance and Grain Yield in Japonica Rice Cultivars in Flooded Fields	36
Deciphering the Genetic Basis of Allelopathy in japonica Rice Cultivated in Temperate Regions Using a Genome-Wide Association Study	35
E3 Ubiquitin Ligase OsRFI2 Regulates Salinity Tolerance by Targeting Ascorbate Peroxidase OsAPX8 for its Degradation in Rice	33
Impairment of the Uroporphyrinogen Decarboxylase 2 Gene Induces Lesion Mimicry and Downregulates Tetrapyrrole Biosynthesis Pathway Genes in Rice	32
Zinc Oxide Nanoparticles Foliar Application Effectively Enhanced Zinc and Aroma Content in Rice (Oryza sativa L.) Grains	32
Improving Rice Grain Quality Through Ecotype Breeding for Enhancing Food and Nutritional Security in Asia–Pacific Region	31
Rice MPK17 Plays a Negative Role in the Xa21-Mediated Resistance Against Xanthomonas oryzae pv. oryzae	29
Optimization of Multi-Generation Multi-location Genomic Prediction Models for Recurrent Genomic Selection in an Upland Rice Population	28
Autotetraploidy of rice does not potentiate the tolerance to drought stress in the seedling stage	28
Construction of a Female Sterility Maintaining System Based on a Novel Mutation of the MEL2 Gene	28
The Signal Peptidase MoSpc2 Orchestrates Fungal Development, Protein Secretion and Pathogenicity in Magnaporthe oryzae	28
Measurements of Antibacterial Activity of Seed Crude Extracts in Cultivated Rice and Wild Oryza Species	26
Epiallelic Variation of TILLER ANGLE CONTROL 5 (TAC5) Regulates Tiller Angle by Modulating Gravitropism in Rice	24
Exploring Genetic Diversity within aus Rice Germplasm: Insights into the Variations in Agro-morphological Traits	23
The PPR-Domain Protein SOAR1 Regulates Salt Tolerance in Rice	23
A Multi-omics Approach Reveals the Effects of Bio- and Chemical- Pesticides on Rice Yield and Quality under Disease Stress	23

Identification of Candidate Genes for Hypoxia Tolerance in Rice by Genome-Wide Association Analysis and Transcriptome Sequencing	23
Modelling and Using Spatial Effects in Nationwide Historical Data Improve Genomic Prediction of Rice Heading Date in Japan	22
Genetic Diversity of Indigenous Rice Varieties Cultivated by Mon-Khmer-Speaking Ethnic Communities in Thailand	22
Allelic Variation of Hd17 for Rice Heading Date is Caused by Natural Selection	22
Rice Thematic Special Issue: Beneficial Plant–Microbe Interactions in Rice	21
Volatile Organic Compounds, Evaluation Methods and Processing Properties for Cooked Rice Flavor	21
Flavonoid Metabolic Profiles and Gene Mapping of Rice (Oryza sativa L.) Purple Gradient Grain Hulls	21
Linkage Mapping and Discovery of Candidate Genes for Drought Tolerance in Rice During the Vegetative Growth Period	20
OsCKq1 Regulates Heading Date and Grain Weight in Rice in Response to Day Length	20
Trihelix Transcription Factor OsTGS1 Regulates Grain Size and Weight in Rice	20
Enhancing N use Efficiency, Increasing Wheat Yield and Reducing Chemical Fertilizer Dependence via Beneficial Bacteria	20
Phosphate Transporter OsPT4, Ubiquitinated by E3 Ligase OsAIRP2, Plays a Crucial Role in Phosphorus and Nitrogen Translocation and Consumption in Germinating Seed	19
OsLEML2 Regulates Rice Thermotolerance Through Auxin and ROS Homeostasis	19
Analysis of the Genetic Stability of Insect and Herbicide Resistance Genes in Transgenic Rice Lines: A Laboratory and Field Experiment	19
Identification of a Saltol-Independent Salinity Tolerance Polymorphism in Rice Mekong Delta Landraces and Characterization of a Promising Line, Doc Phung	19
Potentially Useful Dwarfing or Semi-dwarfing Genes in Rice Breeding in Addition to the sd1 Gene	18
OsSDG715, a Histone H3K9 Methyltransferase, Integrates Auxin and Cytokinin Signaling to Regulate Callus Formation in Rice	18
Identification and Functional Characterization of Anthocyanidin 3-O-Glucosyltransferases OsA3GT1 and OsA3GT2 in Black Rice	18
Multi-environment Genomic Selection in Rice Elite Breeding Lines	18
Effects of variety degeneration on yield formation, quality traits and 2-acetyl-1-pyrroline biosynthesis in high-quality Japonica rice	18
Assessing the Genetic Diversity of Parents for Developing Hybrids Through Morphological and Molecular Markers in Rice (Oryza sativa L.)	17
Linkage Mapping and Identification of Candidate Genes for Cold Tolerance in Rice (Oryza Sativa L.) at the Bud Bursting Stage	17
Identification of Genomic Regions for Deep-Water Resistance in Rice for Efficient Weed Control with Reduced Herbicide Use	17
OsSNDP4, a Sec14-nodulin Domain Protein, is Required for Pollen Development in Rice	16
A Mitochondrial Localized Chaperone Regulator OsBAG6 Functions in Saline-Alkaline Stress Tolerance in Rice	16
Overexpression of lncRNA22524 from Dongxiang Wild Rice Reduces Drought and Salt Stress Tolerance in Cultivated Rice	16
Co-infection of Four Novel Mycoviruses from Three Lineages Confers Hypovirulence on Phytopathogenic Fungus Ustilaginoidea virens	16
Overexpression of the ABA Synthesis Gene OsABA2 Enhances Seed Storability in Rice	16
Comprehensive Analysis of OsENTH Genes and Functional Characterization in Rice Pollen Germination and Pollen Tube Growth	16
Genomic and Transcriptomic Insights into Stage-Specific Drought Resilience in Diverse Myanmar Rice Germplasm	16
Temperature Effect on Rhizome Development in Perennial rice	16
Genetic Improvement of rice Grain size Using the CRISPR/Cas9 System	15
Pangenome-Wide Association Study and Transcriptome Analysis Reveal a Novel QTL and Candidate Genes Controlling both Panicle and Leaf Blast Resistance in Rice	15
OsPP65 Negatively Regulates Osmotic and Salt Stress Responses Through Regulating Phytohormone and Raffinose Family Oligosaccharide Metabolic Pathways in Rice	15
OsPP2C49, a Negative Regulatory Factor in the Abscisic Acid Signaling Pathway, Positively Regulates Grain Yield in Rice	15
Assessment of Rice Sheath Blight Resistance Including Associations with Plant Architecture, as Revealed by Genome-Wide Association Studies	14
Identification of Gene Regulatory Network for Nitrogen-Promoted Tiller Regrowth in Perennial Rice	14
NADP-malic Enzyme OsNADP-ME2 Modulates Plant Height Involving in Gibberellin Signaling in Rice	14
Fulvic Acid Suppresses Excessive Cytokinin Biosynthesis to Reduce ROS Content and thus Decrease Na+ Accumulation and Toxicity, Enhancing Salt Tolerance in Rice	14
Iron Induces Resistance Against the Rice Blast Fungus Magnaporthe oryzae Through Potentiation of Immune Responses	14
Identification of the Cold-Related Genes COLD11 and OsCTS11 via BSA-seq and Fine Mapping at the Rice Seedling Stage	13
Characterization of Domestication Loci Associated with Awn Development in Rice	13
OsABA45 Negatively Regulates Salt Stress Responses by Modulating Abscisic Acid Biosynthesis in Rice	13
Whole-Genome Sequencing of Rice Mutant Library Members Induced by N-Methyl-N-Nitrosourea Mutagenesis of Fertilized Egg Cells	13
Uncovering the Genomic Regions Associated with Yield Maintenance in Rice Under Drought Stress Using an Integrated Meta-Analysis Approach	13
Rice OsFKF1 Promotes Degradation of OsPRR37 for Short-Day Early Flowering	13
OsNAC103, a NAC Transcription Factor, Positively Regulates Leaf Senescence and Plant Architecture in Rice	13
OsWHY1 Interacts with OsTRX z and is Essential for Early Chloroplast Development in Rice	13
Microrchidia OsMORC6 Positively Regulates Cadmium Tolerance and Uptake by Mediating DNA Methylation in Rice	13
OsUGE2 Regulates Plant Growth through Affecting ROS Homeostasis and Iron Level in Rice	12

Genomic Regions and Molecular Markers Associated with Deeper Rooting to Improve Grain Yield in Aerobic Rice (Oryza sativa L.) Production Systems	12
Genome-Wide Association and Transcriptome Analyses Identify OsCBP606 as a Calmodulin-Mediated Susceptibility Gene to Magnaporthe oryzae in Rice	12
Marker-Assisted Introgression of the Salinity Tolerance Locus Saltol in Temperate Japonica Rice	12
Zinc Finger Homeobox Transcription Factors OsMIF1 and OsMIF2 Regulate Grain Size and Panicle Development in Rice	12
Lesion Mimic Mutant: An Ideal Genetic Material for Deciphering the Balance Between Plant Immunity and Growth	12
OsDi19-1 Acts Downstream of OsABI5 to Negatively Regulate ABA-Inhibited Seed Germination and Seedling Growth in Rice	12
Identification of a Seed Vigor–Related QTL Cluster Associated with Weed Competitive Ability in Direct–Seeded Rice (Oryza Sativa L.)	12
OsbZIP35 Mediates ABA-Dependent Drought Tolerance and Stress-Responsive Yield Maintenance in Rice	12
Rice Promoter Editing: An Efficient Genetic Improvement Strategy	11
Heat Stress During Gametogenesis Irreversibly Damages Female Reproductive Organ in Rice	11
Integrative Transcriptomic and Biochemical Analysis Reveals Key HSP20/Alpha-Crystallin Genes Associated with Heat Tolerance in Rice	11
OsSAP6 Positively Regulates Soda Saline–Alkaline Stress Tolerance in Rice	10
Regulation of Drought and Salt Tolerance by OsSKL2 and OsASR1 in Rice	10
miR167d-ARFs Module Regulates Flower Opening and Stigma Size in Rice	10
Integrated Microbiome and Metabolomic Analysis Reveal Responses of Rhizosphere Bacterial Communities and Root exudate Composition to Drought and Genotype in Rice (Oryza sativa L.)	10
Rice Defense Responses Orchestrated by Oral Bacteria of the Rice Striped Stem Borer, Chilo suppressalis	10
A Novel Non-functional RFT1 Allele Delays Heading Date in Rice	10
Effector Triggered Susceptibility and Immunity in Bacterial Diseases of Leaf Blight and Streak in Rice	10
Selection and Validation of 48 KASP Markers for Variety Identification and Breeding Guidance in Conventional and Hybrid Rice (Oryza sativa L.)	10
Leucocalocybe mongolica Fungus Enhances Rice Growth by Reshaping Root Metabolism, and Hormone-Associated Pathways	10
Deciphering Regulatory Networks Governing Seedling Emergence in Deep-Sown Direct-Seeded Rice Cultivation	10
OsRopGEF10 Attenuates Cytokinin Signaling to Regulate Panicle Development and Grain Yield in Rice	10
TaCIPK19-3D Improves Photosynthetic Machinery, Growth, Yield, and Salt Tolerance in Transgenic Rice	10
Pyramiding of Low Chalkiness QTLs Is an Effective Way to Reduce Rice Chalkiness	9
The Histidine-25-Arginine Mutation in the Rice MACPF Protein OsCAD1 Induces Cell Death and Activates Defense Responses in the Lesion Mimic Mutant spl17	9
In Memory of Dr Hei Leung	9
WLP3 Encodes the Ribosomal Protein L18 and Regulates Chloroplast Development in Rice	9
Jasmonic Acid (JA) Signaling Pathway in Rice Defense Against Chilo suppressalis Infestation	9
Impact of Seed Origin and Genetic Drift of Improved Rice Variety IR841 in Benin	9
Molecular Alchemy: Converting Stress into Resilience via Secondary Metabolites and Calcium Signaling in Rice	8
Establishment of a Non-transgenic Iron-Biofortified Rice Line Using a Novel HRZ1 Mutation	8
Enhancement of Heat and Drought Stress Tolerance in Rice by Genetic Manipulation: A Systematic Review	8
Variations in the N2 Fixation and CH4 Oxidation Activities of Type I Methanotrophs in the Rice Roots in Saline-Alkali Paddy Field Under Nitrogen Fertilization	8
Interspecific Hybridization Enhanced Tolerance to Salinity and Cadmium Stress Through Modifying Biochemical, Physiological, and Resistance Gene Levels, Especially in Polyploid Rice: A Sustainable Way	8
Allele Mining of Seed-Related Genes Reveals Early movement, Selection and Adaptation of Asian Rice Landraces	8
Comparative Transcriptome Combined with Morphophysiological Analyses Revealed Carotenoid Biosynthesis for Differential Chilling Tolerance in Two Contrasting Rice (Oryza sativa L.) Genotypes	8
Genome-Wide Association Study Identifies Candidate Genes for Salt Tolerance in Traditional Rice Landraces	8
Comprehensive GWAS and Transcriptome Analysis Discovered Candidate Gene Associated with Starch Pasting Properties of Temperate japonica rice (Oryza sativa L.)	8
Rice Grain Size and Quality	8
A Dual-localized Fructose Bisphosphate Aldolase is Essential for Chloroplast Development and Carbon Metabolism in Rice	8
Correction: E3 Ubiquitin Ligase OsRFI2 Regulates Salinity Tolerance by Targeting Ascorbate Peroxidase OsAPX8 for its Degradation in Rice	8
Constructed Rice Tracers Identify the Major Virulent Transcription Activator-Like Effectors of the Bacterial Leaf Blight Pathogen	8
Geographic Divergence and Putative Candidate Gene Discovery of Rice Grain Quality in China	8
Substitution Mapping and Allelic Variations of the Domestication Genes from O. rufipogon and O. nivara	8
OsSTS, a Novel Allele of Mitogen-Activated Protein Kinase Kinase 4 (OsMKK4), Controls Grain Size and Salt Tolerance in Rice	8
Ubiquitin-Conjugating Enzyme OsUBC11 Affects the Development of Roots via Auxin Pathway	7
Identifying Heat Adaptability QTLs and Candidate Genes for Grain Appearance Quality at the Flowering Stage in Rice	7
Improving Agricultural Traits While Maintaining High Resistant Starch Content in Rice	7
GWAS Combined with WGCNA of Transcriptome and Metabolome to Excavate Key Candidate Genes for Rice Anaerobic Germination	7
Functional Analysis of Mature Activin A Produced by Enterokinase in Plant Cells	7
The Function of SD1 on Shoot Length and its Pyramiding Effect on Shoot Length and Plant Height in Rice (Oryza sativa L.)	7
Mapping of Candidate Genes in Response to Low Nitrogen in Rice Seedlings	7
Haplotype Analysis of the GL7/GW7/SLG7 Gene and Its Application in Improving the Grain Quality of Three-Line Hybrid Rice	7
OsCBL1 Modulates the Nitrate-Induced Phosphate Response by Altering OsNLP4 Cytoplasmic-Nucleus Shuttling	7
Evaluation of Resistance in Indian Rice to Root-Knot Nematode (Meloidogyne graminicola): Insights from Field and Histopathological Studies	7
Metabolite Quantitative Trait Loci Mapping for Fragrance and Fatty Acid Composition in Rice (Oryza Sativa L.)	7
Brassinosteroid-Mediated Improvement of Rice Yield and Phosphorus (P) use Efficiency Under P Deficiency: A Root–Rhizosphere Perspective	7
Endophytes Enhance Rice Inorganic Nitrogen Use Efficiency and Mitigate Nitrogen Loss Via Dissimilatory Nitrate Reduction To Ammonium in Paddy Soils	7
The Effects of Rf4 and the Genetic Mechanism Behind Fertility Restoration of Wild Abortive Cytoplasmic Male Sterility (WA-CMS) in Japonica Rice (Oryza sativa ssp. Japonica)	7
Integrating Multi-omics Analysis to Decipher the Genetic Basis of Heterosis in Xieyou9308	7
Amino Acid Regulation in Rice: Integrated Mechanisms and Agricultural Applications	7
Magnaporthe oryzae effector AvrPik-D targets a transcription factor WG7 to suppress rice immunity	7
Control of Grain Weight and Size in Rice (Oryza sativa L.) by OsPUB3 Encoding a U-Box E3 Ubiquitin Ligase	7
Identification and Candidate Gene Analysis of qCTS11-TK9, a Novel Major Quantitative Trait Locus Associated with Chilling Tolerance in Rice Seedlings	6
A Novel Function of GW5 on Controlling the Early Growth Vigor and its Haplotype Effect on Shoot Dry Weight and Grain Size in Rice (Oryza sativa L.)	6
Genome-Wide Characterization Highlights Key Roles for Bread Wheat MLO Genes in Powdery Mildew and Abiotic Stresses	6
Rice Basic Helix-Loop-Helix 079 (OsbHLH079) Delays Leaf Senescence by Attenuating ABA Signaling	6
The Rice-Microbe Nexus: Unlocking Productivity Through Soil Science	6
OsJAZ10 Modulates Metabolite Profiles in Rice Seedlings in Response to Alkaline Stress	6
Sparse Phenotyping and Haplotype-Based Models for Genomic Prediction in Rice	6
Establishment and Advances of Third-Generation Hybrid Rice Technology: A Review	6
Comparative Proteomic Analysis Provides New Insights into Improved Grain-filling in Ratoon Season Rice	6
OsSSID6 Negatively Regulates Salt Stress Tolerance in Rice (Oryza Sativa L.) via Metabolic Pathways and ROS Scavenging	6
Golgi-Localized OsFPN1 is Involved in Co and Ni Transport and Their Detoxification in Rice	5
Transcriptome Landscapes of Salt-Susceptible Rice Cultivar IR29 Associated with a Plant Growth Promoting Endophytic Streptomyces	5
Mitigation of Greenhouse Gas Emissions from Rice via Manipulation of Key Root Traits	5
Correction: HD-ZIP IV Gene ROC1 Regulates Leaf Rolling and Drought Response Through Formation of Heterodimers with ROC5 and ROC8 in Rice	5
Identification of Key Genes and Pathways for Anaerobic Germination Tolerance in Rice Using Weighted Gene Co-Expression Network Analysis (WGCNA) in Association with Quantitative Trait Locus (QTL) Mappi	5
WOX11-OsPRX130 module confers rice drought tolerance by maintaining ROS homeostasis in rice root	5
Targeted Identification of Rice Grain-Associated Gene Allelic Variation Through Mutation Induction, Targeted Sequencing, and Whole Genome Sequencing Combined with a Mixed-Samples Strategy	5

OsSNDP3 Functions for the Polar Tip Growth in Rice Pollen Together with OsSNDP2, a Paralog of OsSNDP3	5
Giant Rice Is a Unique Candidate for the Sustainable Phytoremediation of Cadmium-Contaminated Paddy Fields	5
Wide Grain 3, a GRAS Protein, Interacts with DLT to Regulate Grain Size and Brassinosteroid Signaling in Rice	5
Biofortified Rice Provides Rich Sakuranetin in Endosperm	5
The miR396f-GRF7 Module Confers Thermotolerance in Rice	5
Targeting eIF4A with RNA Aptamers Enhances Salt Stress Tolerance in Rice Through Modulation of Translation Initiation	5
Mutational Bias and Natural Selection Driving the Synonymous Codon Usage of Single-Exon Genes in Rice (Oryza sativa L.)	5
Identification of Leaf Rust-Related Gene Signature in Wheat (Triticum Aestivum L.) Using High-Throughput Sequencing, Network Analysis, and Machine Learning Algorithms	5
Interrelationships Between Appearance Quality and Starch and Protein Structures in Superior and Inferior Grains of Soft and Non-Soft Rice	4
RGA1 Negatively Regulates Thermo-tolerance by Affecting Carbohydrate Metabolism and the Energy Supply in Rice	4
A Cyclin Gene OsCYCB1;5 Regulates Seed Callus Induction in Rice Revealed by Genome Wide Association Study	4
Evaluating Blast Resistance of Huang-Huai Geng/Japonica Varieties Using Intragenic Markers	4
Elite Alleles of EPE1 Identified via Genome-wide Association Studies Increase Panicle Elongation Length in Rice	4
Advancing Climate-Resilient Sorghum: the Synergistic Role of Plant Biotechnology and Microbial Interactions	4
OsVPE2, a Member of Vacuolar Processing Enzyme Family, Decreases Chilling Tolerance of Rice	4
Melatonin Enhances Antioxidant Defense Systems and Stress Tolerance in Plants under Variable Environmental Conditions	4
Comparative Field Evaluation and Transcriptome Analysis Reveals that Chromosome Doubling Enhances Sheath Blight Resistance in Rice	4
Exogenous Calcium-Mediated Reinforcement of Cell Wall Represents a Pivotal Mechanism in Rice’s Primed Defense Response Against Brown Planthopper Reproduction	4
The endoglucanase gene LOC_Os09g23084 is involved in rice development and susceptibility to sheath rot disease	4
The DEP1 Mutation Improves Stem Lodging Resistance and Biomass Saccharification by Affecting Cell Wall Biosynthesis in Rice	4
Physiological and Molecular Characterization of the Drought Tolerance-Related QTL qDTY12.1 in Japonica Rice	4
Gene Pyramiding Strategies for Sink Size and Source Capacity for High-Yield Japonica Rice Breeding	4
MKK3 Cascade Regulates Seed Dormancy Through a Negative Feedback Loop Modulating ABA Signal in Rice	4
Identification of NADPH Oxidase Genes Crucial for Rice Multiple Disease Resistance and Yield Traits	4
Fine Mapping and Candidate Gene Identification of ORUFILM03g000096 Gene in Weedy Rice LM8: Insights into Grain Length Regulation	4