Annals of Applied Statistics

Article	Citations
Latent variable models for multivariate dyadic data with zero inflation: Analysis of intergenerational exchanges of family support	35
Likelihood-based bacterial identification approach for bimicrobial mass spectrometry data	26
Composite mixture of log-linear models with application to psychiatric studies	23
Inferring synergistic and antagonistic interactions in mixtures of exposures	23
ALPHA: Audit that learns from previously hand-audited ballots	22
Factor-assisted learning of ultrahigh-dimensional covariates with distributed functional and scalar mixtures with applications to the Avon Longitudinal Study of Parents and Children	22
Accurate estimation of rare cell-type fractions from tissue omics data via hierarchical deconvolution	19
Predicting gender employment discrepancies: A multivariate Fay-Herriot model for transformed proportions	18
Multilevel time-series models for small area estimation at different frequencies and domain levels	18
Two-sample tests for multivariate repeated measurements of histogram objects with applications to wearable device data	17
Dirichlet-tree multinomial mixtures for clustering microbiome compositions	17
The risk of maternal complications after cesarean delivery: Near-far matching for instrumental variables study designs with large observational datasets	17
Statistical matching and subclassification with a continuous dose: Characterization, algorithm, and application to a health outcomes study	17
Graph link prediction in computer networks using Poisson matrix factorisation	16
A latent mixture model for heterogeneous causal mechanisms in Mendelian randomization	16
Sequential Monte Carlo for sampling balanced and compact redistricting plans	16
Control charts for dynamic process monitoring with an application to air pollution surveillance	16
Modeling panels of extremes	15
DeepMap: Deep learning-based single-cell data integration using iterative cell matching and structure preservation constraints	15
Flexible multivariate spatiotemporal Hawkes process models of terrorism	14
Joint mixed membership modeling of multivariate longitudinal and survival data for learning the individualized disease progression	12
Penalized joint models of high-dimensional longitudinal biomarkers and a survival outcome	12
On the fair comparison of optimization algorithms in different machines	12
Identifying peer influence in therapeutic communities adjusting for latent homophily	12
Risk set matched difference-in-differences for the analysis of effect modification in an observational study on the impact of gun violence on health outcomes	11

A Bayesian decision framework for optimizing sequential combination antiretroviral therapy in people with HIV	11
Semiparametric linear regression with an interval-censored covariate in the atherosclerosis risk in communities study	11
Variable screening and spatial smoothing in Fréchet regression with application to diffusion tensor imaging	11
Inference for stochastic kinetic models from multiple data sources for joint estimation of infection dynamics from aggregate reports and virological data	11
Disentangling the structure of ecological bipartite networks from observation processes	10
Real-time mechanistic Bayesian forecasts of COVID-19 mortality	10
Modeling cell populations measured by flow cytometry with covariates using sparse mixture of regressions	10
PoD-BIN: A probability of decision Bayesian interval design for time-to-event dose-finding trials with multiple toxicity grades	10
Markov-modulated Hawkes processes for modeling sporadic and bursty event occurrences in social interactions	10
Probabilistic inversion modeling of gas emissions: A gradient-based MCMC estimation of Gaussian plume parameters	10
Randomization inference for cluster-randomized test-negative designs with application to Dengue studies: Unbiased estimation, partial compliance, and stepped-wedge design	10
A privacy-preserved and high-utility synthesis strategy for risk-based stratified subgroups of the Canadian scleroderma patient registry data	10
Marginally calibrated response distributions for end-to-end learning in autonomous driving	10
EBiCop: Ensemble bivariate copulas for modeling multivariate cyber data breach risks	9
Bayesian hierarchical random-effects meta-analysis and design of phase I clinical trials	9
Latent conjunctive Bayesian network: Unify attribute hierarchy and Bayesian network for cognitive diagnosis	9
Testing for the causal mediation effects of multiple mediators using the kernel machine difference method in genome-wide epigenetic studies	9
Latent level correlation modeling of multivariate discrete-valued financial time series	9
Approximate Bayesian inference for analysis of spatiotemporal flood frequency data	9
Data-driven chimney fire risk prediction using machine learning and point process tools	9
An efficient doubly-robust imputation framework for longitudinal dropout, with an application to an Alzheimer’s clinical trial	8
Varying impacts of letters of recommendation on college admissions	8
Clustering and meta-analysis using a mixture of dependent linear tail-free priors	8
Modeling structure and country-specific heterogeneity in misclassification matrices of verbal autopsy-based cause of death classifiers	8
Bayesian multivariate sparse functional principal components analysis with application to longitudinal microbiome multiomics data	8
Predicting milk traits from spectral data using Bayesian probabilistic partial least squares regression	8
Corrigendum Modeling biomarker ratios with gamma distributed components	7
Continuous-time modelling of behavioural responses in animal movement	7
Generalized theme dictionary models for association pattern discovery	7
Pairwise nonlinear dependence analysis of genomic data	7
Bidimensional linked matrix factorization for pan-omics pan-cancer analysis	7
Estimation and inference for exposure effects with latency in the Cox proportional hazards model in the presence of exposure measurement error	7
Matrix completion methods for the total electron content video reconstruction	7
Simple macroeconomic forecast distributions for the G7 economies	7
Averaging polyhazard models using Piecewise deterministic Monte Carlo with applications to data with long-term survivors	7
Postelection analysis of presidential election/poll data	7
Modelling extremes of spatial aggregates of precipitation using conditional methods	7
Leveraging cellphone-derived mobility networks to assess Covid-19 travel risk	7
Using proxies to improve forecast evaluation	7
ANOPOW for replicated nonstationary time series in experiments	7
Tensor quantile regression with low-rank tensor train estimation	7
Endogeneity and moments in time series momentum’s predictability test	7
An extension of estimating equations to model longitudinal medical cost trajectory with Medicare claims data linked to SEER cancer registry	7
Readability prediction: How many features are necessary?	7
Subbotin graphical models for extreme value dependencies with applications to functional neuronal connectivity	6
Communication network dynamics in a large organizational hierarchy	6
Outcome-guided disease subtyping by generative model and weighted joint likelihood in transcriptomic applications	6
Probabilistic HIV recency classification—a logistic regression without labeled individual level training data	6
Supervised learning of outcome-relevant items from a questionnaire via mixed integer optimization	6
Estimating COVID-19 vaccine protection rates via dynamic epidemiological models—a study of 10 countries	6

Multiple imputation of hierarchical nonlinear time series data with an application to school enrollment data	6
Exploring spatiotemporal variation in Covid-19 waves: Non-Euclidean spatially aware functional registration	6
Compressed spectral screening for large-scale differential correlation analysis with application in selecting Glioblastoma gene modules	6
Comparing baseball players across eras via novel Full House Modeling	6
Early effects of 2014 U.S. Medicaid expansions on mortality: Design-based inference for impacts on small subgroups despite small-cell suppression	6
Social distancing and COVID-19: Randomization inference for a structured dose-response relationship	6
Assessing treatment effect through compliance score in randomized trials with noncompliance	6
Association and causation: Attributes and effects of judges in equal employment opportunity commission litigation outcomes	6
Complex discontinuity designs using covariates: Impact of school grade retention on later life outcomes in Chile	5
Contrastive latent variable modeling with application to case-control sequencing experiments	5
Tracking hematopoietic stem cell evolution in a Wiskott–Aldrich clinical trial	5
Distributed subsampling and quasi decorrelated score for cluster data: An application to Beijing multisite air quality	5
Nested conformal prediction sets for classification with applications to probation data	5
Design-based inference for spatial experiments under unknown interference	5
Deconvolution analysis of spatial transcriptomics by multiplicative-additive Poisson-gamma models	5
A Bayesian record linkage approach to applications in tree demography using overlapping LiDAR scans	5
Assessing aquatic toxicity assessment via a clustered variance model	5
Flexible instrumental variable models with Bayesian additive regression trees	5
Parameter calibration in wake effect simulation model with stochastic gradient descent and stratified sampling	5
Nonparametric causal decomposition of group disparities	5
A three-state coupled Markov switching model for COVID-19 outbreaks across Quebec based on hospital admissions	5
Individual dynamic prediction for cure and survival based on longitudinal biomarkers	5
A latent variable approach for modeling relational data with multiple receivers	5
Functional clustering for longitudinal associations between social determinants of health and stroke mortality in the U.S.	5
Estimating product cannibalisation in wholesale using multivariate Hawkes processes with inhibition	5
Network method for voxel-pair-level brain connectivity analysis under spatial-contiguity constraints	5
TEAM: A multiple testing algorithm on the aggregation tree for flow cytometry analysis	5
Estimating Covid-19 transmission time using Hawkes point processes	5
Temporal network influence model with application to the COVID-19 population flow network	5
Computationally efficient Bayesian unit-level models for non-Gaussian data under informative sampling with application to estimation of health insurance coverage	5
Latent subgroup identification in image-on-scalar regression	5
Bayesian model selection: Application to the adjustment of fundamental physical constants	5
Tensor regression for incomplete observations with application to longitudinal studies	5
Semiparametric estimation for dynamic networks with shifted connecting intensities	5
Learning common structures in a collection of networks. An application to food webs	4
Inhomogeneous spatio-temporal point processes on linear networks for visitors’ stops data	4
Graph-aware modeling of brain connectivity networks	4
How many refugees and migrants died trying to reach Europe? Joint population size and total estimation	4
Multivariate mixed membership modeling: Inferring domain-specific risk profiles	4
Improved inference on risk measures for univariate extremes	4
Causal inference for the effect of mobility on COVID-19 deaths	4
Modeling animal movement with directional persistence and attractive points	4
Bayesian learning of clinically meaningful sepsis phenotypes in northern Tanzania	4
Multimodel ensemble analysis with neural network Gaussian processes	4
What makes forest-based heterogeneous treatment effect estimators work?	4
Regularized fingerprinting in detection and attribution of climate change with weight matrix optimizing the efficiency in scaling factor estimation	4
Bayesian local false discovery rate for sparse count data with application to the discovery of hotspots in protein domains	4
Measuring information transfer between nodes in a brain network through spectral transfer entropy	4
Neural networks for extreme quantile regression with an application to forecasting of flood risk	4
Bayesian non-homogeneous hidden Markov model with variable selection for investigating drivers of seizure risk cycling	4
Knockoffs with side information	4
Integrating Mendelian randomization with causal mediation analyses for characterizing direct and indirect exposure-to-outcome effects	4
CeCNN: Copula-enhanced convolutional neural networks in joint prediction of refraction error and axial length based on ultra-widefield fundus images	4
Heterogeneous network analysis of disease clinical treatment measures via mining electronic medical record data	4
Learn then test: Calibrating predictive algorithms to achieve risk control	4
Estimating functional parameters for understanding the impact of weather and government interventions on COVID-19 outbreak	4
Sparse block signal detection and identification for shared cross-trait association analysis	4
Estimating the effectiveness of permanent price reductions for competing products using multivariate Bayesian structural time series models	4
Structure learning for zero-inflated counts with an application to single-cell RNA sequencing data	4
Nonparametric additive value functions: Interpretable reinforcement learning with an application to surgical recovery	4
Model-robust Bayesian design through generalised additive models for monitoring submerged shoals	4
Spatial functional data modeling of plant reflectances	4
Joint stochastic simulation of extreme coastal and offshore significant wave heights	4
A Bayesian precision medicine framework for calibrating individualized therapeutic indices in cancer	4
Spatial predictions on physically constrained domains: Applications to Arctic sea salinity data	4
Benefits and costs of matching prior to a difference in differences analysis when parallel trends does not hold	4
Network differential connectivity analysis	4
Joint modeling of playing time and purchase propensity in massively multiplayer online role-playing games using crossed random effects	4
Design-based mapping of land use/land cover classes with bootstrap estimation of precision by nearest-neighbour interpolation	4
Are made and missed different? An analysis of field goal attempts of professional basketball players via depth based testing procedure	4
Scalable change-point and anomaly detection in cross-correlated data with an application to condition monitoring	4
A high-dimensional approach to measure connectivity in the financial sector	4
Heaping and seeping, GAITD regression and doubly constrained reduced-rank vector generalized linear models in smoking studies	4
Seemingly unrelated Bayesian additive regression trees for cost-effectiveness analyses in healthcare	4
Spatiotemporal wildfire modeling through point processes with moderate and extreme marks	3
Analysis of presence-only data via exact Bayes, with model and effects identification	3
A Bayesian accelerated failure time model for interval censored three-state screening outcomes	3
Is the price cap for gas useful? Evidence from European countries	3
Doubly-online changepoint detection for monitoring health status during sports activities	3
Subgroup identification and variable selection for treatment decision making	3

Functional factor modeling of brain connectivity	3
Estimation of Gaussian directed acyclic graphs using partial ordering information with applications to DREAM3 networks and dairy cattle data	3
Media bias and polarization through the lens of a Markov switching latent space network model	3
Statistical curve models for inferring 3D chromatin architecture	3
Analyzing environmental bioassays with spatial odds, risk, and survival probability ratio regressions	3
Ice model calibration using semicontinuous spatial data	3
A spatial autoregressive random forest algorithm for small-area spatial prediction	3
Varying coefficients correlated velocity models in complex landscapes with boundaries applied to narwhal responses to noise exposure	3
The causal effect of a timeout at stopping an opposing run in the NBA	3
Improving exoplanet detection power: Multivariate Gaussian process models for stellar activity	3
Bayesian analysis of verbal autopsy data using factor models with age- and sex-dependent associations between symptoms	3
Identifying boundaries in spatially continuous risk surfaces from spatially aggregated disease count data	3
A functional-data approach to the Argo data	3
Scalable test of statistical significance for protein-DNA binding changes with insertion and deletion of bases in the genome	3
A general framework for penalized mixed-effects multitask learning with applications on DNA methylation surrogate biomarkers creation	3
Truncated rank-based tests for two-part models with excessive zeros and applications to microbiome data	3
Binned multinomial logistic regression for integrative cell-type annotation	3
Thompson sampling for zero-inflated count outcomes with an application to the Drink Less mobile health study	3
Bayesian inference for partial orders from random linear extensions: Power relations from 12th century royal acta	3
Averaged Prediction Models (APM): Identifying causal effects in controlled pre-post settings with application to gun policy	3
The properties of covariate-adaptive randomization procedures with possibly unequal allocation ratio	3
Ordinal probit functional outcome regression with application to computer-use behavior in rhesus monkeys	3
Semiparametric bivariate hierarchical state space model with application to hormone circadian relationship	3
Joint modeling for learning decision-making dynamics in behavioral experiments	3
Bayesian Cox regression for large-scale inference with applications to electronic health records	3
Bivariate hierarchical Bayesian model for combining summary measures and their uncertainties from multiple sources	3
Learning risk preferences in Markov decision processes: An application to the fourth down decision in the national football league	3
Bayesian decision theory for tree-based adaptive screening tests with an application to youth delinquency	3
Federated learning of robust individualized decision rules with application to heterogeneous multihospital sepsis population	3
A Bayesian hierarchical model for combining multiple data sources in population size estimation	3
Modeling trajectories using functional linear differential equations	3
Estimating the average treatment effect in randomized clinical trials with all-or-none compliance	3
A flexible Bayesian framework to estimate age- and cause-specific child mortality over time from sample registration data	3
Network-based modeling of emotional expressions for multiple cancers via a linguistic analysis of an online health community	3
A Riemann manifold model framework for longitudinal changes in physical activity patterns	3
A deep neural network two-part model and feature importance test for semicontinuous data	3
Do forecasts of bankruptcy cause bankruptcy? A machine learning sensitivity analysis	3
Permutation tests under a rotating sampling plan with clustered data	3
Network-level traffic flow prediction: Functional time series vs. functional neural network approach	3
Estimating heterogeneous gene regulatory networks from zero-inflated single-cell expression data	3
A Bayesian panel vector autoregression to analyze the impact of climate shocks on high-income economies	3