OOIR: Observatory of International Research

Papers

(The TQCC of Interdisciplinary Sciences-Computational Life Sciences is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)

Article	Citations
Using Network Distance Analysis to Predict lncRNA–miRNA Interactions	145
A machine learning-based framework for diagnosis of COVID-19 from chest X-ray images	134
DON: Deep Learning and Optimization-Based Framework for Detection of Novel Coronavirus Disease Using X-ray Images	104
Deep Learning Based Capsule Neural Network Model for Breast Cancer Diagnosis Using Mammogram Images	99
Machine Learning Applications in Drug Repurposing	43
Brain Tumor Detection and Classification Using Cycle Generative Adversarial Networks	43
Inferring Gene Regulatory Networks Using the Improved Markov Blanket Discovery Algorithm	42
COVID-19 in the Age of Artificial Intelligence: A Comprehensive Review	40
Clinical and Laboratory Approach to Diagnose COVID-19 Using Machine Learning	39
Wavelet Transform and Deep Convolutional Neural Network-Based Smart Healthcare System for Gastrointestinal Disease Detection	37
Classification of COVID-19 by Compressed Chest CT Image through Deep Learning on a Large Patients Cohort	34
EnANNDeep: An Ensemble-based lncRNA–protein Interaction Prediction Framework with Adaptive k-Nearest Neighbor Classifier and Deep Models	29
Enabling Artificial Intelligence for Genome Sequence Analysis of COVID-19 and Alike Viruses	28
LPCANet: Classification of Laryngeal Cancer Histopathological Images Using a CNN with Position Attention and Channel Attention Mechanisms	26
Are the Allergic Reactions of COVID-19 Vaccines Caused by mRNA Constructs or Nanocarriers? Immunological Insights	26
MutagenPred-GCNNs: A Graph Convolutional Neural Network-Based Classification Model for Mutagenicity Prediction with Data-Driven Molecular Fingerprints	25
Enhanced Evolutionary Feature Selection and Ensemble Method for Cardiovascular Disease Prediction	25
In silico Methods for Identification of Potential Therapeutic Targets	24
Hantavirus: The Next Pandemic We Are Waiting For?	23
Computational Methods and Online Resources for Identification of piRNA-Related Molecules	22
Accurately Discriminating COVID-19 from Viral and Bacterial Pneumonia According to CT Images Via Deep Learning	20
HD5 and LL-37 Inhibit SARS-CoV and SARS-CoV-2 Binding to Human ACE2 by Molecular Simulation	19
A Novel Image Encryption Scheme for DNA Storage Systems Based on DNA Hybridization and Gene Mutation	18
Ensemble Deep Learning Based on Multi-level Information Enhancement and Greedy Fuzzy Decision for Plant miRNA–lncRNA Interaction Prediction	17
DeepStack-DTIs: Predicting Drug–Target Interactions Using LightGBM Feature Selection and Deep-Stacked Ensemble Classifier	17

A Novel Protein Mapping Method for Predicting the Protein Interactions in COVID-19 Disease by Deep Learning	17
BMRI-NET: A Deep Stacked Ensemble Model for Multi-class Brain Tumor Classification from MRI Images	15
A Radiomics Signature to Quantitatively Analyze COVID-19-Infected Pulmonary Lesions	15
Nonclinical Features in Predictive Modeling of Cardiovascular Diseases: A Machine Learning Approach	15
In Silico Mutagenesis-Based Remodelling of SARS-CoV-1 Peptide (ATLQAIAS) to Inhibit SARS-CoV-2: Structural-Dynamics and Free Energy Calculations	15
A Review of Parallel Implementations for the Smith–Waterman Algorithm	14
CEGSO: Boosting Essential Proteins Prediction by Integrating Protein Complex, Gene Expression, Gene Ontology, Subcellular Localization and Orthology Information	13
A Hierarchical Error Correction Strategy for Text DNA Storage	12
Construction of a Pearson- and MIC-Based Co-expression Network to Identify Potential Cancer Genes	12
Pathogenic Factors Identification of Brain Imaging and Gene in Late Mild Cognitive Impairment	12
The Application of Convolutional Neural Network Model in Diagnosis and Nursing of MR Imaging in Alzheimer's Disease	11
Deep Residual Network for Diagnosis of Retinal Diseases Using Optical Coherence Tomography Images	11
Accurate Prediction of Anti-hypertensive Peptides Based on Convolutional Neural Network and Gated Recurrent unit	11
Mathematical Modeling of Calcium Oscillatory Patterns in a Neuron	11
MVGCNMDA: Multi-view Graph Augmentation Convolutional Network for Uncovering Disease-Related Microbes	11
Predicting circRNA-Disease Associations Based on Deep Matrix Factorization with Multi-source Fusion	11
PredAPP: Predicting Anti-Parasitic Peptides with Undersampling and Ensemble Approaches	11
A Novel Multitasking Ant Colony Optimization Method for Detecting Multiorder SNP Interactions	10
Deep-Learning-Based Segmentation and Localization of White Matter Hyperintensities on Magnetic Resonance Images	10
i6mA-VC: A Multi-Classifier Voting Method for the Computational Identification of DNA N6-methyladenine Sites	10
MSResG: Using GAE and Residual GCN to Predict Drug–Drug Interactions Based on Multi-source Drug Features	10
SUSCC: Secondary Construction of Feature Space based on UMAP for Rapid and Accurate Clustering Large-scale Single Cell RNA-seq Data	10
Multiple Protein Subcellular Locations Prediction Based on Deep Convolutional Neural Networks with Self-Attention Mechanism	9
Genomic sequence analysis of lung infections using artificial intelligence technique	9
A New Sequential Forward Feature Selection (SFFS) Algorithm for Mining Best Topological and Biological Features to Predict Protein Complexes from Protein–Protein Interaction Networks (PPINs)	9
Feature Generalization for Breast Cancer Detection in Histopathological Images	9
RicENN: Prediction of Rice Enhancers with Neural Network Based on DNA Sequences	9
Protein Subcellular Localization Prediction Model Based on Graph Convolutional Network	8
Biomarker Identification in Membranous Nephropathy Using a Long Non-coding RNA-Mediated Competitive Endogenous RNA Network	8
Predicting Drug Synergy and Discovering New Drug Combinations Based on a Graph Autoencoder and Convolutional Neural Network	8
HTRPCA: Hypergraph Regularized Tensor Robust Principal Component Analysis for Sample Clustering in Tumor Omics Data	8
Molecular Identification and Phylogenetic Analysis of the Traditional Chinese Medicinal Plant Kochia scoparia Using ITS2 Barcoding	8
Application of Immune Checkpoint Inhibitors in Solid Organ Transplantation Recipients: A Systematic Review	7
Adaptive Total-Variation Regularized Low-Rank Representation for Analyzing Single-Cell RNA-seq Data	7
LncRNA-Encoded Short Peptides Identification Using Feature Subset Recombination and Ensemble Learning	7
Target-Based In Silico Screening for Phytoactive Compounds Targeting SARS-CoV-2	7
FTWSVM-SR: DNA-Binding Proteins Identification via Fuzzy Twin Support Vector Machines on Self-Representation	7
CNNLSTMac4CPred: A Hybrid Model for N4-Acetylcytidine Prediction	7
Dual Attention Mechanisms and Feature Fusion Networks Based Method for Predicting LncRNA-Disease Associations	7
ASI-DBNet: An Adaptive Sparse Interactive ResNet-Vision Transformer Dual-Branch Network for the Grading of Brain Cancer Histopathological Images	7
Discovery of a Natural Product with Potent Efficacy Against SARS-CoV-2 by Drug Screening	6
Cardiac Severity Classification Using Pre Trained Neural Networks	6
Anti-cancer Peptide Recognition Based on Grouped Sequence and Spatial Dimension Integrated Networks	6
Multi-feature Fusion Method Based on Linear Neighborhood Propagation Predict Plant LncRNA–Protein Interactions	6
LDAEXC: LncRNA–Disease Associations Prediction with Deep Autoencoder and XGBoost Classifier	6
Utilization of Deep Convolutional Neural Networks for Accurate Chest X-Ray Diagnosis and Disease Detection	6
Discovery of Genetic Biomarkers for Alzheimer’s Disease Using Adaptive Convolutional Neural Networks Ensemble and Genome-Wide Association Studies	6
Identifying Visual Attention Features Accurately Discerning Between Autism and Typically Developing: a Deep Learning Framework	6
Deep Learning-Based Modeling of Drug–Target Interaction Prediction Incorporating Binding Site Information of Proteins	6
A Novel Deep-Learning-Based CADx Architecture for Classification of Thyroid Nodules Using Ultrasound Images	6

Classification of Breast Cancer and Breast Neoplasm Scenarios Based on Machine Learning and Sequence Features from lncRNAs–miRNAs-Diseases Associations	6
easyMF: A Web Platform for Matrix Factorization-Based Gene Discovery from Large-scale Transcriptome Data	6
PredPromoter-MF(2L): A Novel Approach of Promoter Prediction Based on Multi-source Feature Fusion and Deep Forest	6