Journal of Computational Science

Article	Citations
Numerical scheme for solving the soil-water coupling problems based on finite volume method with unstructured mesh	98
Finding top-r weighted 74
Onco*: An umbrella Python framework for modelling and simulation of oncological scenarios	69
Editorial Board	66
Unsupervised continual learning by cross-level, instance-group and pseudo-group discrimination with hard attention	63
Identifying influential nodes in complex networks through the k-shell index and neighborhood information	59
Numerical solution of phase change heat transfer problems by effective heat capacity model and element differential method	59
Deep-learning based parameter identification enables rationalization of battery material evolution in complex electrochemical systems	52
Identifying influential nodes by leveraging redundant ties	48
Classification of obstructive and non-obstructive pulmonary diseases on the basis of spirometry using machine learning techniques	47
A non-boundary-fitted-grid method, based on compact integrated-RBF approximations, for solving differential problems in multiply-connected domains	44
Evolutionary algorithm optimizes screen design for solar cell metallization	43
Speedup deep learning models on GPU by taking advantage of efficient unstructured pruning and bit-width reduction	43
Predictive models development using gradient boosting based methods for solar power plants	43
Improvement of attack detection performance on the internet of things with PSO-search and random forest	42
Inductive and transductive link prediction for criminal network analysis	42
Simplifying approach to node classification in Graph Neural Networks	42
Editorial Board	41
Editorial Board	40
Implementation of Lees–Edwards periodic boundary conditions for three-dimensional lattice Boltzmann simulation of particle dispersions under shear flow	40
Polynomial chaos expansion surrogate modeling of passive cardiac mechanics using the Holzapfel–Ogden constitutive model	39
Neuroevolutionary representations for learning heterogeneous treatment effects	38
Sparse discrete least squares meshless method on multicore computers	37
Using GPUs to simulate photovoltaic power plants: Special cases of performance loss	37
Axial vibration analysis of nanorods with variable density based on nonlocal elastic theory and high-order finite difference method	37

Surrogate-assisted optimization for augmentation of finite element techniques	36
Applications of the differential transform to second-order half-linear Euler equations	33
Parallel computing strategies for Sanitized Teaching Learning Based Optimization	33
Study on the influence of blade on electromagnetic scattering characteristics in the open-ended cavity	33
Analysis of continuous data assimilation scheme for the Navier–Stokes equations using variational multiscale method	32
Two-point resistances of symmetric polyhedral networks	31
Editorial Board	31
Editorial Board	30
Editorial Board	29
A method for localization using network and analysis of data error	27
A physiological mathematical model of the human thyroid	26
The effects of the number of channels and gyroscopic data on the classification performance in EMG data acquired by Myo armband	26
Preface—From the modeling of social behavior to computational diplomacy	26
Editorial Board	25
Preconditioned central moment lattice Boltzmann method on a rectangular lattice grid for accelerated computations of inhomogeneous flows	24
Empirical feature learning in application-based samples: A case study	24
Chaos follow the leader algorithm: Application to data classification	24
In situ feature analysis for large-scale multiphase flow simulations	24
Numerical study of variable order model arising in chemical processes using operational matrix and collocation method	23
Editorial Board	23
A new collective anomaly detection approach using pitch frequency and dissimilarity: Pitchy anomaly detection (PAD)	23
Search by triplet: An efficient local track reconstruction algorithm for parallel architectures	23
Effects of combined chemotherapeutic drugs on the growth and survival of cancerous tumours– an in-silico study	23
Parameter control for differential evolution by storage of successful values at an individual level	23
Finite Element Method on locally refined composite meshes for Dirichlet fractional Laplacian	22
Toward Jordan decompositions for tensors	22
DARSI: A deep auto-regressive time series inference architecture for forecasting of aerodynamic parameters	21
Quasi-linear time heuristic to solve the Euclidean traveling salesman problem with low gap	21
Editorial Board	20
Unraveling dynamics of bursting, transient, and tipping behavior in toxic plankton–fish system with fear and zooplankton refuge	20
An efficient quantum circuit for block encoding a pairing Hamiltonian	20
Identifying pan-cancer and cancer subtype miRNAs using interpretable convolutional neural network	20
Validation of XAI explanations for multivariate time series classification in the maritime domain	19
Augmenting MRI scan data with real-time predictions of glioblastoma brain tumor evolution using faster exponential time integrators	19
Temporal convolutional networks and transformers for classifying the sleep stage in awake or asleep using pulse oximetry signals	19
Hybrid parallel iterative sparse linear solver framework for reservoir geomechanical and flow simulation	18
Efficiency of parallel anisotropic mesh adaptation for the solution of the bidomain model in cardiac tissue	18
An improved sine–cosine algorithm with dynamic selection pressure	18
Learning-to-augment incorporated noise-robust deep CNN for detection of COVID-19 in noisy X-ray images	18
Manifold learning methods for the diagnosis of ovarian cancer	18
Enhanced expected hypervolume improvement criterion for parallel multi-objective optimization	17
Effective strategies of metamodeling and optimization of hot incremental sheet forming process of Ti6Al4Vartificial hip joint component	17
Numerical behavior of the variable-order fractional Van der Pol oscillator	17
Fast convergence of SPH numerical solutions using robust algebraic multilevel	17
Observation data compression for variational assimilation of dynamical systems	17
Classification and feature selection methods based on fitting logistic regression to PU data	17
Lattice Boltzmann simulation of complex thermal flows via a simplified immersed boundary method	17
Physics-informed boundary integral networks (PIBI-Nets): A data-driven approach for solving partial differential equations	17
A multi-objective service composition method considering the interests of tri-stakeholders in cloud manufacturing based on an enhanced jellyfish search optimizer	17
Multi-view contrastive learning for multilayer network embedding	16

A machine learning pipeline for membrane segmentation of cryo-electron tomograms	16
TransFlowNet: A physics-constrained Transformer framework for spatio-temporal super-resolution of flow simulations	16
Big data for human security: The case of COVID-19	16
Fractional analysis of Jeffrey fluid over a vertical plate with time-dependent conductivity and diffusivity: A low-cost spectral approach	16
PDE patch-based surface reconstruction from point clouds	16
Ab-initio study on physical properties of intermetallic LiPb compound	16
Mesh generation and multi-scale simulation of a contracting muscle–tendon complex	16
Solving the multi-objective Hamiltonian cycle problem using a Branch-and-Fix based algorithm	15
Hybrid genetic predictive modeling for finding optimal multipurpose multicomponent therapy	15
A distributed chunk calculation approach for self-scheduling of parallel applications on distributed-memory systems	15
Stability analysis of a three species food chain model with linear functional response via imprecise and parametric approach	15
Reconstruction of the local volatility function using the Black–Scholes model	15
Transfer learning with DWT based clustering for blood pressure estimation of multiple patients	15
Cubature rules for weakly and fully compressible off-lattice Boltzmann methods	15
Physics engine based simulation of shear behavior of granular soils using hard and soft contact models	15
Block-enhanced precision matrix estimation for large-scale datasets	15
tinyMD: Mapping molecular dynamics simulations to heterogeneous hardware using partial evaluation	15
Optimization method for linear constraint problems	15
Computational science for a better future	14
Graph convolution approach for labor market analysis	14
A multithreaded real-time solution for 2D EIT reconstruction with the D-bar algorithm	13
An efficient recurrent neural network for defensive Stackelberg game	13
Analysis of the spike responses in the neuromorphic implementation of the two-compartmental model of hippocampal pyramidal neuron	13
Surrogate-assisted finite element model updating for detecting scour depths in a continuous bridge	13
A numerical study on the drag reduction and wake regime control of the tandem circular cylinders using splitter plates	13
Fast adaptive sampling with operation time control	13
Multi-channel fusion graph neural network for multivariate time series forecasting	13
Coefficient identification in a SIS fractional-order modelling of economic losses in the propagation of COVID-19	13
A reduced order modeling approach with Petrov–Galerkin projection based on hybrid snapshot simulation in Semilinear-PDEs	13
A new parallel adaptive clustering and its application to streaming data	13
Numerical simulation of functioning a silicene anode of a lithium-ion battery	13
Non-uniformly sampled 2D NMR Spectroscopy reconstruction based on Low Rank Hankel Matrix Fast Tri-Factorization and Non-convex Factorization	12
Fractal feature analysis based on phase transitions of the Allen–Cahn and Cahn–Hilliard equations	12
Searching for a Feedback Vertex Set with the link-cut tree	12
Performance evaluation of linear antenna array using quasi opposition modified particle swarm algorithm	12
Assessing the identifiability of model selection frameworks for the prediction of patient outcomes in the clinical breast cancer setting	12
A numerical investigation of 2D transient heat conduction problems in anisotropic FGMs with time-dependent conductivity	12
The Hamiltonian Cycle and Travelling Salesperson problems with traversal-dependent edge deletion	12
Decapodes: A diagrammatic tool for representing, composing, and computing spatialized partial differential equations	12
CPU and GPU oriented optimizations for LiDAR data processing	12
Physics informed machine learning for chemistry tabulation	12
Establishing metrics to quantify spatial similarity in spherical and red blood cell distributions	12
An efficient high-order compact approach for spiral wave dynamics by the FHN model	12
Fundus image segmentation based on random collision whale optimization algorithm	12
A model to address the cold-start in peer recommendation by using k-means clustering and sentence embedding	11
A generalized framework for integrating machine learning into computational fluid dynamics	11
Generative model-based framework for parameter estimation and uncertainty quantification applied to a compartmental model in epidemiology	11
Sharkovskii’s theorem and the limits of digital computers for the simulation of chaotic dynamical systems	11
A novel dynamic decision-making method: Addressing the complexity of attribute weight and time weight	11
Development of a multi-layer canopy model for E3SM Land Model with support for heterogeneous computing	11
Novel hits for targeting kidney failure in type 2 diabetes derived via in silico screening of the ZINC natural product database	11
Reinforcement Twinning: From digital twins to model-based reinforcement learning	11
An information fusion approach based on weight correction and evidence theory	11
RuMedSpellchecker: A new approach for advanced spelling error correction in Russian electronic health records	11
Machine learning approaches for assessing rechargeable battery state-of-charge in unmanned aircraft vehicle-eVTOL	11
Storage estimation in morphology modeling of the human whole brain at the nanoscale	11
Compatible multi-model output fusion for complex systems modeling via set operation-based focus data identification	11
Corrigendum to “Reformulated Fourier Modal Method with improved near field computations” [J. Comput. Sci. 67 (2023) 101936]	11
Voting according to one’s political stances is difficult: Problems definition, computational hardness, and approximate solutions	11
IP-GCN: A deep learning model for prediction of insulin using graph convolutional network for diabetes drug design	10
Effectiveness of grid and random approaches for a model parameter vector optimization	10
Estimation of correlation matrices from limited time series data using machine learning	10
Improving predictive models for rate of penetration in real drilling operations through transfer learning	10
A machine learning framework for identifying influenza pneumonia from bacterial pneumonia for medical decision making	10
On the theory of quantum and towards practical computation: A review	10
Applications of Text Mining techniques to extract meaningful information from gastroenterology medical reports	10
Computational inverse imaging method by machine learning-informed physical model for electrical capacitance tomography	10
Hybrid meta-heuristic algorithm based deep neural network for face recognition	10
Clustering of graphs using pseudo-guided random walk	10
Deep learning aided surrogate modeling of the epidemiological models	10
Optimal number of clusters in explainable data analysis of agent-based simulation experiments	10
Slope Stability Evaluation and Prediction Based on KTAN Coupling Model and Monte Carlo method	10
Explaining the impact of parameter combinations in agent-based models	10
Analyzing categorical time series with the package ctsfeatures	10
Burr detection and classification using RUSTICO and image processing	9
PSGformer: A novel multivariate net load forecasting model for the smart grid	9
Towards lightweight excavation: Machine learning exploration of rock size distribution prediction after tunnel blasting	9
Deep attention network for identifying ligand-protein binding sites	9
A novel potential edge weight method for identifying influential nodes in complex networks based on neighborhood and position	9
Accelerating urban scale simulations leveraging local spatial 3D structure	9

Siamese Autoencoder Architecture for the Imputation of Data Missing Not at Random	9
Characterizing pedestrian contact interaction trajectories to understand spreading risk in human crowds	9
Some observations regarding the RBF-FD approximation accuracy dependence on stencil size	9
Computation at the Cutting Edge of Science	9
Nonlinear dynamics and optimal control strategies of a novel fractional-order lumpy skin disease model	9
An ensemble approach to maximize metal removal rate for chatter free milling	9
Shock waves generators: From prevention of hail storms to reduction of the smog in urban areas — experimental verification and numerical simulations	9
A novel collocation approach using Chebyshev wavelets for solving fourth-order Emden-Fowler type equations	9
Physics-informed generator-encoder adversarial networks with latent space matching for stochastic differential equations	9
Assessing input parameter hyperspace and parameter identifiability in a cardiovascular system model via sensitivity analysis	9
Parallel self-avoiding walks for a low-autocorrelation binary sequences problem	9
Material hardness descriptor derived by symbolic regression	9
Editorial Board	8
Negative results on density determination with one-dimensional cellular automata with block-sequential asynchronous updates	8
Editorial Board	8
A novel particle decomposition scheme to improve parallel performance of fully resolved particulate flow simulations	8
An open-source pipeline for solving continuous reaction–diffusion models in image-based geometries of porous media	8
A meshless fragile points method for the solution of the monodomain model for cardiac electrophysiology simulation	8
Jacobian weighted element differential method for solid mechanics	8
Extending FEniCS to work in higher dimensions using tensor product finite elements	8
Stability analysis of MHD stagnation point flow of Casson fluid past a shrinking sheet in porous medium considering heat sink or source, thermal radiation and suction effects	8
PPEIM: A preference path-based early-stage influence accumulation model for influential nodes identification in locally dense multi-core networks	8
Towards efficient GPGPU Cellular Automata model implementation using persistent active cells	8
Enhanced heat transfer in ternary tangent hyperbolic nanofluids through non-darcy porous media	8
In-silico analysis of airflow dynamics and particle transport within a human nasal cavity	8
MaMiCo: Non-local means and POD filtering with flexible data-flow for two-way coupled molecular-continuum HPC flow simulation	8
Investigating the interaction between EEG and fNIRS: A multimodal network analysis of brain connectivity	8
A deeper look at Graph Embedding RetroFitting	8
Analysis of the electrostatic field distribution to improve the electrospinning process—Practical tips	8
Automatic shape detection of ice crystals	8
Analytical assessment of workers’ safety concerning direct and indirect ways of getting infected by dangerous pathogen	8
HCS-R-HER: Hierarchical reinforcement learning based on cross subtasks rainbow hindsight experience replay	8
Enhancing multi-omics data classification with relative expression analysis and decision trees	8
Perturbation and Repository based Diversified Cuckoo Search in reconstruction of Gene Regulatory Network: A new Cuckoo Search approach	8
A reliable scheme for nonlinear delay differential equations of pantograph-type	8
Bayesian approaches for revealing complex neural network dynamics in Parkinson’s disease	7
Multi-wave, breather and interaction solutions to (3+1) dimensional sine-Gordon equation arising in nonlinear physical sciences	7
Higher-order Haar wavelet method for solution of fourth-order integro-differential equations	7
Exploration-oriented sampling strategies for global surrogate modeling: A comparison between one-stage and adaptive methods	7
Computational analysis of cardiac structure and function in congenital heart disease: Translating discoveries to clinical strategies	7
Swin-FlowNet: Flow field oriented optimization aided by a CNN and Swin-Transformer based model	7
Better decision-making strategy with target seeking approach of humanoids using hybridized SOARANN-fuzzy technique	7
Deep dive into generative models through feature interpoint distances	7
Gas kinetic principles in Navier–Stokes finite-volume solvers	7
GCN-RA: A graph convolutional network-based resource allocator for reconfigurable systems	7
Computational aspects of nonlinear and multiscale analyses by the multipoint meshless FDM	7
An approach based on multiplex networks for modeling cascading trust failures in social networks	7
An adaptive optimization method for estimating the number of components in a Gaussian mixture model	7
An algorithmic pipeline for solving equations over discrete dynamical systems modelling hypothesis on real phenomena	7
A new efficient semi-numerical method with a convergence control parameter for Lane–Emden–Fowler boundary value problem	7
Discovering biomarkers of hepatocellular carcinoma from single-cell RNA sequencing data by cooperative games on gene regulatory network	7
Dynamics of stage-structured ecological aquaculture management model with impulsive harvesting and nonlinearly releasing larval predators at different fixed moments	7
A multi-compartment VRP model for the health care waste transportation problem	7
Dual full-wave formulations with Radiant Electric Circuit Element boundary conditions — Application to monopole antenna modeling	7
Shallow Neural Hawkes: Non-parametric kernel estimation for Hawkes processes	7
A soft sensor open-source methodology for inexpensive monitoring of water quality: A case study of NO3− concentrations	7
Python Indian Weather Radar Toolkit (pyiwr): An open-source Python library for processing, analyzing and visualizing weather radar data	7
Axial force coherence study of strut loading in soft soil deep excavation	7
New efficient four-stage implicit trigonometrically fitted modified RKN for second-order ODEs	7
A new open-source library based on novel high-resolution structure-preserving convection schemes	7
Role of prey refuge and fear level in fractional prey–predator model with anti-predator	7
Enabling the smart supply chain ecosystems: A multi-parameter decentralized model for Supply Chain 5.0	7
Graph based semi-supervised learning using spatial segregation theory	7
Unit and regression tests of scientific software: A study on SWMM	6
The Pegasus workflow management system: Translational computer science in practice	6
Diagnosis of lung cancer using hybrid deep neural network with adaptive sine cosine crow search algorithm	6
Segmentation optimization in trajectory-based ship classification	6
Personalised parameter estimation of the cardiovascular system: Leveraging data assimilation and sensitivity analysis	6
Customizable adaptive regularization techniques for B-spline modeling	6
Speedup of the Metropolis protocol via algorithmic optimization	6
Development of an efficient large time step unsteady solver for incompressible flows using the IDEAL algorithm in OpenFOAM	6
20 years of computational science: Selected papers from 2020 International Conference on Computational Science	6
Predicting multidimensional data via tensor learning	6
SymNOM-GED: Symmetric neighbor outlier mining in gene expression datasets	6
An agent based simulation system for analyzing stress regulation policies at the workplace	6
Multi-discretization domain specific language and code generation for differential equations	6
Fast computation of fractal dimension for 2D, 3D and 4D data	6
The impact of domain-driven and data-driven feature selection on the inverse design of nanoparticle catalysts	6
Hybrid predictive modelling: Thyrotoxic atrial fibrillation case	6
Evolutionary Rao algorithm	6
Translational research in the MPICH project	6
Calibration of single-cell model parameters based on membrane resistance improves the accuracy of cardiac tissue simulations	6
Fully-automated deep learning pipeline for segmentation and classification of breast ultrasound images	6
The computational planet	6
Seeking critical nodes in digraphs	6
Towards accommodating deadline driven jobs on high performance computing platforms in grid computing environment	6
Machine learning driven extended matrix norm method for the solution of large-scale zero-sum matrix games	6
A transfer framework based on co-matrix decomposition for undirected, high-dimensional and sparse networks	6
Edge-Wise Graph-Instructed Neural Networks	5
A fast method based on variable time steps for 2D nonlinear time-fractional generalized Benjamin–Bona–Mahony–Burgers equation: Error and stability analysis	5
Analytical and numerical methods for the solution to the rigid punch contact integral equations	5
CICN: Higher-order link prediction with clustering mutual information of common neighbors	5
Integration of multi-fidelity methods in parametrized non-intrusive reduced order models for industrial applications	5
On a computational paradigm for a class of fractional order direct and inverse problems in terms of physics-informed neural networks with the attention mechanism	5
Lattice Boltzmann simulation of pollutant transport in shallow water flows: Application to Nador lagoon	5