OOIR: Observatory of International Research

Papers

(The TQCC of Biochimica et Biophysica Acta-Gene Regulatory Mechanisms is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-02-01 to 2025-02-01.)

Article	Citations
Editorial Board	43
DNA methylation of the promoter region at the CREB1 binding site is a mechanism for the epigenetic regulation of brain-specific PKMζ	26
Rpb4/7, a key element of RNA pol II to coordinate mRNA synthesis in the nucleus with cytoplasmic functions in Saccharomyces cerevisiae	24
Editorial Board	23
Editorial Board	23
METTL3 activates PERK-eIF2α dependent coelomocyte apoptosis by targeting the endoplasmic reticulum degradation-related protein SEL1L in echinoderms	22
Histone H4K20 monomethylation enables recombinant nucleosome methylation by PRMT1 in vitro	21
Rho-dependent transcription termination is the dominant mechanism in Mycobacterium tuberculosis	21
Illuminating ligand-induced dynamics in nuclear receptors through MD simulations	19
DDX3X functionally and physically interacts with Estrogen Receptor-alpha	19
The plant nucleoplasmin AtFKBP43 needs its extended arms for histone interaction	19
Inactivation of CbrAB two-component system hampers root colonization in rhizospheric strain of Pseudomonas aeruginosa PGPR2	18
UPS writes a new saga of SAGA	18
Post-translational modifications in stress granule and their implications in neurodegenerative diseases	18
Insight into the mechanism of AML del(9q) progression: hnRNP K targets the myeloid master regulators CEBPA (C/EBPα) and SPI1 (PU.1)	17
Post-translational regulation of proto-oncogene ZBTB7A expression by p53 status in cancer cells: HSP90-dependent stabilization vs. p53-KLHL20-ubiquitin proteasomal degradation	15
From the comparative study of a circRNA originating from an mammalian ATXN2L intron to understanding the genesis of intron lariat-derived circRNAs	14
Editorial Board	14
From why to how; The gene expression knowledge commons	13
Dynamics of epigenetic control in plants via SET domain containing proteins: Structural and functional insights	12
Histone variant H2B.Z acetylation is necessary for maintenance of Toxoplasma gondii biological fitness	11
Damaged collagen detected by collagen hybridizing peptide as efficient diagnosis marker for early hepatic fibrosis	11
The nucleolus: Coordinating stress response and genomic stability	10
The emerging roles of GCN5L1 in mitochondrial and vacuolar organelle biology	10
Analysis of the proximal promoter of the human colon-specific B4GALNT2 (Sda synthase) gene: B4GALNT2 is transcriptionally regulated by ETS1	10

Cell cycle roles for GCN5 revealed through genetic suppression	10
Selenoprotein F (SELENOF)-mediated AKT1-FOXO3a-PYGL axis contributes to selenium supranutrition-induced glycogenolysis and lipogenesis	9
Histone ubiquitination: Role in genome integrity and chromatin organization	9
SAGA and TFIID: Friends of TBP drifting apart	9
Catching BETs by viruses	9
Transcriptional regulation of Znt family members znt4, znt5 and znt10 and their function in zinc transport in yellow catfish (Pelteobagrus fulvidraco)	9
Cut from the same cloth: RNAs transcribed from regulatory elements	9
EBV infection alters DNA methylation in primary human colon cells: A path to inflammation and carcinogenesis?	9
The moonlighting of RAD23 in DNA repair and protein degradation	8
Non-histone protein acetylation by the evolutionarily conserved GCN5 and PCAF acetyltransferases	8
BCL11b interacts with RNA and proteins involved in RNA processing and developmental diseases	8
Sirtuin4 impacts mitochondrial homeostasis in pancreatic cancer cells by reducing the stability of AlkB homolog 1 via deacetylation of the HRD1-SEL1L complex	8
Long noncoding RNAs in ubiquitination, protein degradation, and human diseases	8
Alzheimer's disease-associated mutant ubiquitin (UBB+1) is secreted through an autophagosome-like vesicle-mediated unconventional pathway	7
Catalysis by protein acetyltransferase Gcn5	7
Corrigendum to “RNA-binding protein HuD reduces triglyceride production in pancreatic β cells by enhancing the expression of insulin-induced gene 1” [Biochim. Biophys. Acta Gene Regul. Mech. 1859/4 (2	7
Histone acetyltransferase 1 (HAT1) acetylates hypoxia-inducible factor 2 alpha (HIF2A) to execute hypoxia response	7
Editorial Board	7
Ser392 phosphorylation modulated a switch between p53 and transcriptional condensates	7
The presence of an intron relieves gene repression caused by promoter-proximal four-bp specific sequences in yeast	7
Dietary choline prevents high fat-induced disorder of hepatic cholesterol metabolism through SREBP-2/HNF-4α/CYP7A1 pathway in a freshwater teleost yellow catfish Pelteobagrus fulvidraco	7
Reviewer Acknowledgement	7
Chemical biology and pharmacology of histone lysine methylation inhibitors	7
A GO catalogue of human DNA-binding transcription factors	7
Complex functions of Gcn5 and Pcaf in development and disease	7
Ubiquitination and deubiquitination: Implications on cancer therapy	6
Editorial Board	6
Network-driven discovery yields new insight into Shox2-dependent cardiac rhythm control	6
TRIM25-mediated ubiquitination of G3BP1 regulates the proliferation and migration of human neuroblastoma cells	6
Allelic variation within the major APOE CpG island affects its methylation in the brain of targeted replacement mice expressing human APOE	6
Hereditary Vitamin D-Resistant Rickets (HVDRR) associated SNP variants of vitamin D receptor exhibit malfunctioning at multiple levels	6
The essential link: How STAT3 connects tumor metabolism to immunity	6
The prediction of tumor and normal tissues based on the DNA methylation values of ten key sites	6
WT1 regulates HOXB9 gene expression in a bidirectional way	6
Insights on the biological functions and diverse regulation of RNA-binding protein 39 and their implication in human diseases	6
Editorial Board	6
Editorial Board	6
HBO1, a MYSTerious KAT and its links to cancer	6
Nucleo-cytoplasmic shuttling of RNA-binding factors: mRNA buffering and beyond	6
The fine-tuned crosstalk between lysine acetylation and the circadian rhythm	6
Multimerization of HIF enhances transcription of target genes containing the hypoxia ancillary sequence	6
Characterization of divergent promoters PmaiA and Phyd from Gordonia: Co-expression and regulation by CRP	6