OOIR: Observatory of International Research

Papers

(The TQCC of Marine Genomics is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)

Article	Citations
Complete genome sequence of the marine mangrove fungus Sarcopodium sp.QM3–1 confirmed its high potential for antimicrobial activity	21
De novo transcriptome assembly of the Southern Ocean copepod Rhincalanus gigas sheds light on developmental changes in gene expression	18
Complete genome of Nocardioides aquaticus KCTC 9944T isolated from meromictic and hypersaline Ekho Lake, Antarctica	14
Aquaculture omics: An update on the current status of research and data analysis	12
Bioactivity of bacteria associated with Red Sea nudibranchs and whole genome sequence of Nocardiopsis dassonvillei RACA-4	12
Editorial Board	10
De novo transcriptome assembly of the deep-sea hydrothermal vent, shrimp Rimicaris exoculate (Crustacea: Decapoda), from the south Mid-Atlantic Ridge	10
Complete genome of Pelagovum pacificum SM1903T isolated from the marine surface oligotrophic environment	10
Complete genome sequence of Pseudoalteromonas sp. Xi13 capable of degrading κ-selenocarrageenan isolated from the floating ice of Southern Ocean	9
Genomic characteristics of nine Nitrospirota metagenome-assembled genomes in deep-sea sediments from East Pacific polymetallic nodules zone	8
Genomic analysis of Thalassospira sp. SW-3-3 reveals its genetic potential for phthalate pollution remediation	8
The complete genome sequence of Shewanella inventionis D1489 reveals its potential for the production of eicosapentaenoic acid	8
Complete genome sequence of Polaribacter sejongensis NJDZ03 exhibiting diverse macroalgal polysaccharide-degrading activity	8
Complete genome of Polaribacter huanghezhanensis KCTC 32516T isolated from glaciomarine fjord sediment of Svalbard	7
Genomic analysis of Alteromonas sp. M12 isolated from the Mariana Trench reveals its role in dimethylsulfoniopropionate cycling	7
RNA-seq analysis of the mantle transcriptome from Mytilus edulis during a seasonal spawning event in deep and shallow water culture sites on the northeast coast of Newfoundland, Canada	7
Genomic analysis of Isoptericola halotolerans SM2308 reveals its potential involved in fucoidan degradation	7
Complete genome analysis of copper resistant bacteria Pseudoalteromonas sp. CuT4–3 isolated from a deep-sea hydrothermal vent	7
Editorial Board	7
Genomic divergence and differential gene expression between crustacean ecotypes across a marine thermal gradient	7
Genomic analysis of Vibrio sp. D3 reveals its role in marine sulfur cycling	6
Editorial Board	6
Isolation and genome sequencing of a novel lytic Pseudoalteromonas phage SL20	6
Genomic analysis of Rhodopirellula sp. P2 reveals its role in fucoidan degradation	6
Complete genome sequence of the denitrifying Pseudomonas sp. strain DNDY-54 isolated from deep-sea sediment of ninety east ridge	6

Iso-Seq assembly and functional annotation of full-length transcriptome of turbot (Scophthalmus maximus) during bacterial infection	6
De novo assembly and annotation of the whole transcriptome of Muraenesox cinereus	6
Complete genome sequence of Psychrobacter cibarius AOSW16051, a trimeric autotransporter adhesin synthesizing bacterium isolated from the Baltic Sea	6
Genome analysis of the heterotrophic microalga Thraustochytrium sp. TN22 to identify genes involved in exopolysaccharide and carotenoid biosynthesis pathways	6
Editorial Board	6
Complete genome analysis of Bacillus subtilis TY-1 reveals its biocontrol potential against tobacco bacterial wilt	6
Effects of sampling and storage procedures on 16S rDNA amplicon sequencing results of kelp microbiomes	5
Genome analysis of a new biosurfactants source: The Antarctic bacterium Psychrobacter sp. TAE2020	5
Genome analysis of Salinimicrobium sp. 3283s, a deep-sea bacterium isolated from the sediments of South China Sea, China	5
Genomic analysis of a marine alphaproteobacterium Sagittula sp. strain MA-2 that carried eight plasmids	5
Transcriptome responses in copepods Calanus finmarchicus, Calanus glacialis and Calanus hyperboreus exposed to phenanthrene and benzo[a]pyrene	5
Genomic insights into secondary metabolites of pharmaceutical utility for Hyphococcus flavus MCCC 1K03223T, isolated from bathypelagic seawater	5
Complete genome sequence of marine Roseobacter lineage member Monaibacterium sp. ALG8 with six plasmids isolated from seawater around brown algae	4
Complete genome sequence of Halomonas alkaliantarctica MSP3 isolated from marine sediment, Jeju Island	4
Complete genome sequence of Rhodoferax sp. PAMC 29310 from a marine sediment of the East Siberian Sea	4
A first annotated genome sequence for Haliotis midae with genomic insights into abalone evolution and traits of economic importance	4
Genomic analysis of Sulfitobacter sp. PM12 reveals its role in betaine metabolism	4
Complete genome sequence analysis of Bacillus velezensis A5, a promising biocontrol agent from the Pacific Ocean	4
The complete genome sequence of Stenotrophomonas sp. P2112 for genome mining of polyvinyl chloride degrading enzymes	4
Genomic analysis of Marinobacter flavimaris ZYH30 reveals its role in marine dimethylsulfide cycling	4
First certain record of Demospongiae class (Porifera) alien species from the Mediterranean Sea	4
Complete genome sequence of the novel Antarctic Oceanisphaera sp. IT1–181 that carried five plasmids	4
Genomic profiling of biosynthetic potentials of medicinal secondary metabolites for ‘Aliisedimentitalea scapharcae’ KCTC 42119T, isolated from ark shell	4
Genomic insights into Marinobacterium sediminicola CGMCC 1.7287T: A polyhydroxyalkanoate-producing bacterium isolated from marine sediment	4
Genomic analysis of Cobetia sp. D5 reveals its role in marine sulfur cycling	4
A first look at the ‘repeatome’ of Benedenia humboldti, a major pathogen in yellowtail aquaculture: Repetitive element characterization, nuclear rRNA operon assembly, and microsatellite discovery	4
Complete genome sequence of pectin-degrading Flavobacteriaceae bacterium GSB9	4