Journal of Proteomics

Article	Citations
The impact of maceration on the ‘Osteo-ome’; a pilot investigation	61
DiagnoMass: A proteomics hub for pinpointing discriminative spectral clusters	50
Remarkable intrapopulation venom variability in the monocellate cobra (Naja kaouthia) unveils neglected aspects of India's snakebite problem	40
Proteomic differences in apple spur buds from high and non-cropping trees during floral initiation	40
Integrative proteome analysis of bone marrow interstitial fluid and serum reveals candidate signature for acute myeloid leukemia	37
Distinct gut microbiota and metabolite profiles induced by delivery mode in healthy Chinese infants	37
Rapid Evaporative Ionisation Mass Spectrometry fingerprinting can discriminate lamb meat due to different ageing methods and levels of dehydration	36
DIA-based analysis of the menstrual blood proteome identifies association between CXCL5 and IL1RN and endometriosis	35
Site-specific N-glycosylation analysis of human thyroid thyroglobulin by mass spectrometry-based Glyco-analytical strategies	33
Expression of serum proteins in noise induced hearing loss workers of mining based industry	32
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Proteomics study of colorectal cancer and adenomatous polyps identifies TFR1, SAHH, and HV307 as potential biomarkers for screening	29
Proteogenomic insight into the basis of the insecticide tolerance/resistance of the pollen beetle Brassicogethes (Meligethes) aeneus	29
Across the great divide: Proteomics becoming an essential tool for animal and veterinary sciences	29
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Proteomics studies on Protozoan Parasite Biology	24
Effect of dietary incorporation of Chlorella vulgaris and CAZyme supplementation on the hepatic proteome of finishing pigs	24
Transcriptomic and proteomic analyses reveal the first occurrence of diverse toxin groups in Millepora alcicornis	23
Beyond the identifiable proteome: Delving into the proteomics of polymyxin-resistant and non-resistant Acinetobacter baumannii from Brazilian hospitals	23
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Influence of chemical dose and exposure duration on protein synthesis in green sea turtle primary cells	21

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Proteomic analysis of the mucus of the photosynthetic sea slug Elysia crispata	21
Protein signatures of spontaneous lipolysis and lipoprotein lipase activity in cow's milk	21
Proteomic analysis reveals the global effect of the BarA/SirA-Csr regulatory cascade in Salmonella Typhimurium grown in conditions that favor the expression of invasion genes	21
5-HT-treated mouse B cells alleviate ulcerative colitis via RIPK1: Insights from proteomic and phosphoproteomic analyses	20
Liver proteome profiling in dairy cows during the transition from gestation to lactation: Effects of supplementation with essential fatty acids and conjugated linoleic acids as explored by PLS-DA	20
DIA-based quantitative proteomic analysis of porcine endometrium in the peri-implantation phase	20
The Eastern Bandy Bandy Vermicella annulata, expresses high abundance of SVMP, CRiSP and Kunitz protein families in its venom proteome	20
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Profiling the neuroproteomics of honeybee brain: A clue for understanding the role of neuropeptides in the modulation of aggressivity	20
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Comparative sub-cellular proteome analyses reveals metabolic differentiation and production of effector-like molecules in the dieback phytopathogen Phytophthora cinnamomi.	19
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MAGED2 controls vasopressin-induced aquaporin-2 expression in collecting duct cells	19
Structurally related (−)-epicatechin metabolites and gut microbiota derived metabolites exert genomic modifications via VEGF signaling pathways in brain microvascular endothelial cells under lipotoxic	19
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Proteomic changes associated with maternal dietary low ω6:ω3 ratio in piglets supplemented with seaweed Part II: Ileum proteomes	18
N-glycosylation profiling of serum immunoglobulin in opisthorchiasis patients	18
Clues from the intestinal mucus proteome of Atlantic salmon to counter inflammation	18
Unraveling and profiling Tityus bahiensis venom: Biochemical analyses of the major toxins	18
Phos-tag diagonal electrophoresis precisely detects the mobility change of phosphoproteins in Phos-tag SDS-PAGE	18
A proteomic approach for investigating the pleiotropic effects of statins in the atherosclerosis risk in communities (ARIC) study	18
Disulfide bonds in the SAPA domain of the pulmonary surfactant protein B precursor	18
Integrated proteomic and transcriptomic analysis reveals that polymorphic shell colors vary with melanin synthesis in Bellamya purificata snail	18
Comparative proteome analysis of the midgut of Rhipicephalus microplus (Acari: Ixodidae) strains with contrasting resistance to ivermectin reveals the activation of proteins involved in the detoxifica	18
Untangling the fibre ball: Proteomic characterization of South American camelid hair fibres by untargeted multivariate analysis and molecular networking	17
Proteomic insights into adventitious root formation in Larix kaempferi	17
Proteomic analysis reveals rattlesnake venom modulation of proteins associated with cardiac tissue damage in mouse hearts	17
Comparison of different variant sequence types coupled with decoy generation methods used in concatenated target-decoy database searches for proteogenomic research	17
Proteomic profile of Cryptococcus gattii biofilm: Metabolic shift and the potential activation of electron chain transport	17
Myosin light chain kinase mediates intestinal barrier dysfunction following simulated microgravity based on proteomic strategy	17
Salt stress downregulates 2-hydroxybutyrylation in Arabidopsis siliques	17
A fingerprint of plasma proteome alteration after local tissue damage induced by Bothrops leucurus snake venom in mice	17
Using single cell type proteomics to identify Al-induced proteomes in outer layer cells and interior tissues in the apical meristem/cell division regions of tomato root-tips	16
Proteomic profiling of soft tissue sarcomas with SWATH mass spectrometry	16
Mitochondrial proteomic analysis reveals the regulation of energy metabolism and reactive oxygen species production in Clematis terniflora DC. leaves under high-level UV-B radiation followed by dark t	16
A rapid and simple signature peptides-based method for species authentication of three main commercial Pheretima	16
Comparative phosphoproteomic analysis unravels MAPK1 regulated phosphoproteins in Leishmania donovani	16
Machine learning approach to predict blood-secretory proteins and potential biomarkers for liver cancer using omics data	16
A comprehensive update on Capsicum proteomics: Advances and future prospects	16
Overview of omics applications in elucidating the underlying mechanisms of biochemical and biological factors associated with meat safety and nutrition	16
Secretomic insight into the biomass hydrolysis potential of the phytopathogenic fungus Chrysoporthe cubensis	15
Using feature selection and Bayesian network identify cancer subtypes based on proteomic data	15
A novel proteomic approach for the identification and relative quantification of disulfide-bridges in the human milk proteome	15
Proteomics profiling of ertapenem challenged major porin deficient carbapenem-resistant Klebsiella pneumoniae	15
TMT proteomics analysis of intestinal tissue from patients of irritable bowel syndrome with diarrhea: Implications for multiple nutrient ingestion abnormality	15
A targeted multiplex mass spectrometry method for quantitation of abundant matrix and cellular proteins in formalin-fixed paraffin embedded arterial tissue	15
Development of automated proteomic workflows utilizing silicon-based coupling agents	15
Deviant proteome profile of equine granulocytes associates to latent activation status in organ specific autoimmune disease	15

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Phosphorylation analysis of the Hippo-YAP pathway using Phos-tag	15
Integrated insights into the mechanisms underlying sepsis-induced myocardial depression using a quantitative global proteomic analysis	15
Identification of phosphorylated small ORF-encoded peptides in Hep3B cells by LC/MS/MS	15
Proteomic analysis of aqueous humor in patients with pathologic myopia	14
Effects of genetic diversity on the allergenicity of peanut (Arachis hypogaea) proteins: identification of the hypoallergenic accessions using BALB/c mice model and in silico analysis of Ara h 3 aller	14
Proteomic analysis reveals molecular mechanism of Cd2+ tolerance in the leaves of halophyte Halogeton glomeratus	14
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Serum proteome profiling reveals differentially expressed proteins between subjects with metabolically healthy obesity and nonalcoholic fatty liver disease	14
Proteomic approaches to characterize biochemistry of fresh beef color	14
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Mass spectrometric characterisation of the major peptides of the male ejaculatory duct, including a glycopeptide with an unusual zwitterionic glycosylation	14
The potential of metabolomics in meat science: Current applications, trends, and challenges	14
iTRAQ-based analysis for the identification of MARCH8 targets in human esophageal squamous cell carcinoma	14
Proteomics reveals gender differences in physiological characteristics of the gonads and tube feet of the sea cucumber, Apostichopus japonicus	14
Plasma proteomic changes in response to surgical trauma and a novel transdermal analgesic treatment in dogs	14
Integrating serum proteomics and metabolomics to compare the common and distinct features between acute aggressive ischemic stroke (APIS) and acute non-aggressive ischemic stroke (ANPIS)	14
iTRAQ-based proteomic analysis provides novel insight into the postnatal testicular development of Hu sheep	13
The ovaries of ivermectin-resistant Rhipicephalus microplus strains display proteomic adaptations involving the induction of xenobiotic detoxification and structural remodeling mechanisms	13
Integrated proteomic and phosphoproteomic analysis for characterization of colorectal cancer	13
A family of QconCATs (Quantification conCATemers) for the quantification of human pharmacological target proteins	13
Proteomic analysis of Laodelphax striatellus in response to Rice stripe virus infection reveal a potential role of ZFP36L1 in restriction of viral proliferation	13
Testing the efficacy and comparability of ZooMS protocols on archaeological bone	13
MAPK signaling pathway orchestrates and fine-tunes the pathogenicity of Colletotrichum falcatum	13
Network pharmacology combined with metabolomics to reveal the anti-fibrotic mechanism of Polygoni Orientalis Fructus in CCl4-induced hepatic fibrosis rats	13
Two untargeted metabolomics reveals yogurt-associated metabolic alterations in women with multiple metabolic disorders from a randomized controlled study	13
iTRAQ-based quantitative proteomic analysis of the liver regeneration termination phase after partial hepatectomy in mice	12
Use of liquid chromatography-tandem mass spectrometry to perform urinary proteomic analysis of children with IgA nephropathy and Henoch-Schönlein purpura nephritis	12
Quantitative proteomic analysis of trachea in fatting pig exposed to ammonia	12
Serum proteomic analysis identified ITIH4 as a potential novel biomarker for feline infectious peritonitis	12
The role of methyl jasmonate in enhancing biomass yields and bioactive metabolites in Stauroneis sp. (Bacillariophyceae) revealed by proteome and biochemical profiling	12
Proteomics of restenosis model in LDLR-deficient hamsters coupled with the proliferative rat vascular smooth muscle cells reveals a new mechanism of vascular remodeling diseases	12
Integrating transcriptomics, proteomics, glycomics and glycoproteomics to characterize paclitaxel resistance in breast cancer cells	12
The proteome reveals the involvement of serine/threonine kinase in the recognition of self- incompatibility in almond	12
Comparative proteomics and secretomics revealed virulence, and coresistance-related factors in non O1/O139 Vibrio cholerae recovered from 16 species of consumable aquatic animals	12
Comparative proteomics reveals genetic mechanisms of body weight in Hu sheep and Dorper sheep	12
The mitochondrial isoform glutathione peroxidase 3 (OsGPX3) is involved in ABA responses in rice plants	12
Integrative transcriptomic and proteomic profile revealed inhibition of oxidative phosphorylation and peroxisomes during renal interstitial fibrosis	12
The diagnostic and prognostic value of SAA1 as a novel biomarker for acute aortic dissection	12
New insight into the rapid growth of the Mikania micrantha stem based on DIA proteomic and RNA-Seq analysis	12
Proteomic integrity of tape-stripped stratum corneum samples endures higher temperatures	12
Effect of dietary Spirulina (Arthrospira platensis) on the intestinal function of post-weaned piglet: An approach combining proteomics, metabolomics and histological studies	12
Systematic analysis of chemical-protein interactions from zebrafish embryo by proteome-wide thermal shift assay, bridging the gap between molecular interactions and toxicity pathways	12
Serum proteome signatures associated with ileal and colonic ulcers in Crohn's disease	11
Proteins involved in mitochondrial metabolic functions and fertilization predominate in stallions with better motility	11
Proteomic profile of polar filament and polar tube from fungal pathogen microsporidium Nosema bombycis provides new insights into its unique invasion organelle	11
Absolute quantification of viral proteins during single-round replication of MDCK suspension cells	11
Proteomic analysis reveals the effects of melatonin on soybean root tips under flooding stress	11
Serum proteomic analysis reveals possible mechanism underlying physiological hemostasis of swim bladder	11
Biostimulant impacts of Glutacetine® and derived formulations (VNT1 and VNT4) on the bread wheat grain proteome	11
Proteomic profiling of plasma exosomes reveals CD82 involvement in the development of esophageal squamous cell carcinoma	11
TMT-based quantitative proteomic analysis of indica rice cultivars reveals that novel components of the signaling pathways might play a role in grain length regulation	11
Polymeric immunoglobulin receptor and galectin-3-binding protein are raised in biliary atresia: Reveals a proteomic-based study	11
The proteomics of the freshwater pearl powder: Insights from biomineralization to biomedical application	11
Metabonomics analysis reveals the protective effect of nano‑selenium against heat stress of rainbow trout (Oncorhynchus mykiss)	11
iTRAQ-based quantitative proteomics suggests mitophagy involvement after Rice black-streaked dwarf virus acquisition in insect vector small brown planthopper Laodelphax striatellus Fallén	11
Comparative proteomics unveils the bacteriostatic mechanisms of Ga(III) on the regulation of metabolic pathways in Pseudomonas aeruginosa	11
Age-stratified proteomic characteristics and identification of promising precise clinical treatment targets of colorectal cancer	10
TMT based proteomic profiling of Sophora alopecuroides leaves reveal flavonoid biosynthesis processes in response to salt stress	10
Multidimensional separation schemes enhance the identification and molecular characterization of low molecular weight proteomes and short open reading frame-encoded peptides in top-down proteomics	10
Proteomic and Phosphoproteomic analysis of thyroid papillary carcinoma: Identification of potential biomarkers for metastasis	10
Quantitative proteomic analysis of gingival crevicular fluids to identify novel biomarkers of gingival recession in orthodontic patients	10
Physiological and proteomic dissection of the rice roots in response to iron deficiency and excess	10
Stable bull fertility protein markers in seminal plasma	10
Untargeted metabolomics of buffalo urine reveals hydracyrlic acid, 3-bromo-1-propanol and benzyl serine as potential estrus biomarkers	10
Corrigendum to Proteomic analysis detects deregulated reverse cholesterol transport in human subjects with ST-segment elevation myocardial infarction	10
Corrigendum to: “Proteomic analysis of peripheral blood mononuclear cells and inflammatory status in postpartum dairy cows supplemented with different sources of omega-3 fatty acids”	10
Proteome analysis of rainbow trout (Oncorhynchus mykiss) liver responses to chronic heat stress using DIA/SWATH	10
Proteomics analysis of tissue small extracellular vesicles reveals protein panels for the reoccurrence prediction of colorectal cancer	10
Folylpoly-ɣ-glutamate synthetase association to the cytoskeleton: Implications to folate metabolon compartmentalization	10
Integrative proteomic and phosphoproteomic profiling of invasive micropapillary breast carcinoma	10
Profiling the proteoforms of urinary prostate-specific antigen by capillary electrophoresis – mass spectrometry	10
Proteomic analysis of peripheral blood mononuclear cells and inflammatory status in postpartum dairy cows supplemented with different sources of omega-3 fatty acids	10
Effect of feeding fermented distiller's grains diets on immune status and metabolomics of spleen and mesenteric lymph nodes in finishing cattle	10
SRSF1 inhibits ferroptosis and reduces cisplatin chemosensitivity of triple-negative breast cancer cells through the circSEPT9/GCH1 axis	10
Technical report: The clinically useful selection of proteins protocol: An approach to identify clinically useful proteins for validation	10
Comparative proteome analysis of Actinoplanes utahensis grown on various saccharides based on 2D-DIGE and MALDI-TOF/TOF-MS	10
Proteomics approach reveals urinary markers for early pregnancy diagnosis in buffaloes	10
N-Glycome changes reflecting resistance to platinum-based chemotherapy in ovarian cancer	10
Comparison of extracellular matrix enrichment protocols for the improved characterization of the skin matrisome by mass spectrometry	10

Effect of resveratrol on the biofilm formation and physiological properties of avian pathogenic Escherichia coli	9
Exploring the biological activities and proteome of Brazilian scorpion Rhopalurus agamemnon venom	9
Adding polyvinylpyrrolidone to low level protein samples significantly improves peptide recovery in FASP digests: An inexpensive and simple modification to the FASP protocol	9
Stress response of lettuce (Lactuca sativa) to environmental contamination with selected pharmaceuticals: A proteomic study	9
Intraspecific venom variation in the Iberian asp viper (Vipera aspis zinnikeri) across natural and intensive agricultural habitats	9
Untargeted metabolomics of 3xTg-AD neurotoxic astrocytes	9
Combined ultraviolet and darkness regulation of medicinal metabolites in Mahonia bealei revealed by proteomics and metabolomics	9
The effect of the production system on the proteomics profiles of the Longissimus thoracis muscle in Arouquesa cattle	9
Peptidomic analysis of antioxidant peptides from porcine liver hydrolysates using SWATH-MS	9
Integrative transcriptomic-proteomic analysis revealed the flavor formation mechanism and antioxidant activity in rice-acid inoculated with Lactobacillus paracasei and Kluyveromyces marxianus	9
Comparative proteomics analysis of samples from hepatic cystic echinococcosis patients using data-independent acquisition approach	9
Loggerhead sea turtle Caretta caretta plasma biochemistry and proteome profile modulation during recovery	9
Proteomic characterization of Opisthorchis felineus exosome-like vesicles and their uptake by human cholangiocytes	9
Molecular insights into myelomeningocele via proteomic analysis of amniotic fluid	9
An integrated multi-level analysis reveals learning-memory deficits and synaptic dysfunction in the rat model exposure to austere environment	9
Exploration of potential drug targets for Glaucoma by plasma proteome screening	9
Circulating proteomic profiles in women with morbid obesity compared to normal-weight women	9
Distinct salinity-induced changes in wheat metabolic machinery in different root tissue types	9
Quantitative label-free proteomic analysis of human follicle fluid to identify novel candidate protein biomarker for endometriosis-associated infertility	9
On the standardization of ZooMS nomenclature	9
The influence of delay in mononuclear cell isolation on acute myeloid leukemia phosphorylation profiles	9
Integrative proteomic and transcriptomic analysis in the female goat ovary to explore the onset of puberty	9
Proteomic analysis of extracellular vesicles and conditioned medium from human adipose-derived stem/stromal cells and dermal fibroblasts	9
Proteomic analysis of donkey sperm reveals changes in acrosome enzymes and redox regulation during cryopreservation	9
Decellularized extracellular matrix from bovine ovarian tissue maintains the protein composition of the native matrisome	9
Ontogeny, not prey availability, underlies allopatric venom variability in insular and mainland populations of Vipera ammodytes	9
Drug response-based precision therapeutic selection for tamoxifen-resistant triple-positive breast cancer	9
Insights into the differential proteome landscape of a newly isolated Paramecium multimicronucleatum in response to cadmium stress	9
Goat mammary gland metabolism: An integrated Omics analysis to unravel seasonal weight loss tolerance	9
Global landscape of lysine acylomes in Bacillus subtilis	9
Integrated metabolomics and proteomics analysis reveals energy metabolism disorders in the livers of sleep-deprived mice	9
Orosomucoid can predict baseline peritoneal transport characteristics in peritoneal dialysis patients and reduce peritoneal proteins loss	8
Proteomics coupled transcriptomics reveals Slc34a1 and Slc34a3 downregulation as potential features of nephrotoxin-induced acute kidney injury	8
Plasma proteomics analysis reveals potential biomarkers for intracranial aneurysm formation and rupture	8
Deep analysis of total serum N-glycome suggests glyco-signatures for phospholipase A2 receptor 1-related idiopathic membranous nephropathy diagnosis	8
Proteomics-based host-specific biomarkers for tuberculosis: The future of TB diagnosis	8
Label-free plasma proteomics for the identification of the putative biomarkers of oral squamous cell carcinoma	8
Identification and characterization of non-small cell lung cancer associated sialoglycoproteins	8
In-gel protein digestion using acidic methanol produces a highly selective methylation of glutamic acid residues	8
Proteomic characterization of the fibroin-based silk fibers produced by weaver ant Camponotus textor	8
Integrated analysis of the sialotranscriptome and sialoproteome of the rat flea Xenopsylla cheopis	8
Community-based network analyses reveal emerging connectivity patterns of protein-protein interactions in murine melanoma secretome	8
FPTMS: Frequency-based approach to identify the peptide from the low-energy collision-induced dissociation tandem mass spectra	8
SHIP1 modulation and proteome characterization of microglia	8
Global proteomic analyses of lysine acetylation, malonylation, succinylation, and crotonylation in human sperm reveal their involvement in male fertility	8
Multifaceted roles of the egg perivitelline layer in avian reproduction: Functional insights from the proteomes of chicken egg inner and outer sublayers	8
HisPhosSite: A comprehensive database of histidine phosphorylated proteins and sites	8
Understanding of the postgerminative development response to salinity and drought stresses in cucumber seeds by integrated proteomics and transcriptomics analysis	8
Identification of novel potential interaction partners of UDP-galactose (SLC35A2), UDP-N-acetylglucosamine (SLC35A3) and an orphan (SLC35A4) nucleotide sugar transporters	8
Proteomic alterations in the plasma of Beagle dogs induced by Toxocara canis infection	8
Serum and urine profiling by high-throughput TMT-based proteomics for the investigation of renal dysfunction in canine babesiosis	8
Identifying novel allergens from a common indoor mould Aspergillus ochraceus	8
The effects of sample handling on proteomics assessed by reverse phase protein arrays (RPPA): Functional proteomic profiling in leukemia	8
FAIMS-MS might contribute to phosphopeptides identification in plasma	8
Unveiling novel metabolic alterations in postmenopausal osteoporosis and type 2 diabetes mellitus through NMR-based metabolomics: A pioneering approach for identifying early diagnostic markers	8
Analysis of post-translational modification dynamics unveiled novel insights into Rice responses to MSP1	8
Proteomic approaches for the profiling of ubiquitylation events and their applications in drug discovery	8
Proteomic profiling the molecular signatures of plectranthoic acid in prostate cancer cells	8
Membrane proteomic analysis identifies the polarity protein PARD3 as a novel antiviral protein against PEDV infection	8
Serial and multi-level proteome analysis for microscale protein samples	8
Proteomic analysis of murine kidney proximal tubule sub-segment derived cell lines reveals preferences in mitochondrial pathway activity	8
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Affinity purification of in vivo assembled whirlin-associated protein complexes from the zebrafish retina	8
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