OOIR: Observatory of International Research

Papers

(The median citation count of New Biotechnology is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-04-01 to 2024-04-01.)

Article	Citations
Bioeconomy: Biomass and biomass-based energy supply and demand	176
The role of microalgae in the bioeconomy	136
Renewable polymers and plastics: Performance beyond the green	112
Characterization of heavy metal toxicity in some plants and microorganisms—A preliminary approach for environmental bioremediation	91
AI for life: Trends in artificial intelligence for biotechnology	83
Towards a bio-based circular economy in organic waste management and wastewater treatment – The Polish perspective	64
Linking the bioeconomy to the 2030 sustainable development agenda: Can SDG indicators be used to monitor progress towards a sustainable bioeconomy?	57
Advances in combined enzymatic extraction of ferulic acid from wheat bran	51
Selenite reduction by the rhizobacterium Azospirillum brasilense, synthesis of extracellular selenium nanoparticles and their characterisation	49
Influence of substrate crystallinity and glass transition temperature on enzymatic degradation of polyethylene terephthalate (PET)	49
Development of a bioeconomy monitoring framework for the European Union: An integrative and collaborative approach	49
High rate selection of PHA accumulating mixed cultures in sequencing batch reactors with uncoupled carbon and nitrogen feeding	45
Innovative, ecofriendly biosorbent-biodegrading biofilms for bioremediation of oil- contaminated water	42
Bioeconomy moving forward step by step – A global journey	42
Valorization of raw brewers’ spent grain through the production of volatile fatty acids	40
Comparative genomics reveals the organic acid biosynthesis metabolic pathways among five lactic acid bacterial species isolated from fermented vegetables	36
Isopropanol production from carbon dioxide in Cupriavidus necator in a pressurized bioreactor	35
Enzymatic modification to produce health-promoting lipids from fish oil, algae and other new omega-3 sources: A review	35
Bioeconomy – present status and future needs of industrial value chains	34
Sustainable production of food grade omega-3 oil using aquatic protists: Reliability and future horizons	34
For the sake of the Bioeconomy: define what a Synthetic Biology Chassis is!	33
Bioeconomy – A driver for regional development in the Nordic countries	33
Towards detection of SARS-CoV-2 RNA in human saliva: A paper-based cell-free toehold switch biosensor with a visual bioluminescent output	33
Towards the sustainable production of bulk-chemicals using biotechnology	31
Bioeconomy development factors in the European Union and Poland	30

Biocatalysis – Key enabling tools from biocatalytic one-step and multi-step reactions to biocatalytic total synthesis	29
VOLATILE FATTY ACIDS FROM ORGANIC WASTES AS NOVEL LOW-COST CARBON SOURCE FOR Yarrowia lipolytica	28
Calcium effect on microbial activity and biomass aggregation during anaerobic digestion at high salinity	28
The bioeconomy in Italy and the new national strategy for a more competitive and sustainable country	27
Explainability and causability for artificial intelligence-supported medical image analysis in the context of the European In Vitro Diagnostic Regulation	27
A brick in the wall: Discovering a novel mineral component of the biofilm extracellular matrix	27
A novel thermophile β-galactosidase from Thermothielavioides terrestris producing galactooligosaccharides from acid whey	25
Enrichment of a mixed microbial culture of PHA-storing microorganisms by using fermented hardwood spent sulfite liquor	23
Biodiplomacy, the new frontier for bioeconomy	23
Modeling the oxygen inhibition in microalgae: An experimental approach based on photorespirometry	22
Transition of microbial communities and degradation pathways in anaerobic digestion at decreasing retention time	22
Two new exopolysaccharides from a thermophilic bacterium Geobacillus sp. WSUCF1: Characterization and bioactivities	20
Multiplex genome editing in Ashbya gossypii using CRISPR-Cpf1	20
Digitalization in microbiology – Paving the path to sustainable circular bioeconomy	20
A Roadmap for Industry to Harness Biotechnology for a More Circular Economy	20
Microbial inoculum development for ameliorating crop drought stress: A case study of Variovorax paradoxus 5C-2	20
Current state and future directions of bioeconomy in the Czech Republic	19
Brewer’s spent grain as a no-cost substrate for polyhydroxyalkanoates production: Assessment of pretreatment strategies and different bacterial strains	19
Synthesis and Characterization of Lignin-grafted-poly(ε-caprolactone) from Different Biomass Sources	17
Community profile governs substrate competition in polyhydroxyalkanoate (PHA)-producing mixed cultures	17
Next biotechnological plants for addressing global challenges: The contribution of transgenesis and new breeding techniques	16
Microbiome changes and oxidative capability of an anaerobic PCB dechlorinating enrichment culture after oxygen exposure	16
Affinity-based isolation of extracellular vesicles by means of single-domain antibodies bound to macroporous methacrylate-based copolymer	16
Rhamnolipids from non-pathogenic Acinetobacter calcoaceticus: Bioreactor-scale production, characterization and wound healing potency	16
The impact of biomass withdrawal strategy on the biomass selection and polyhydroxyalkanoates accumulation of mixed microbial cultures	16
Bioinformatics based discovery of new keratinases in protease family M36	16
Genome-wide gene-deletion screening identifies mutations that significantly enhance explosives vapor detection by a microbial sensor	15
Development of laboratory-scale sequential electrokinetic and biological treatment of chronically hydrocarbon-impacted soils	15
High throughput generation of a resource of the human secretome in mammalian cells	15
Automating the design-build-test-learn cycle towards next-generation bacterial cell factories	15
High level production of amorphadiene using Bacillus subtilis as an optimized terpenoid cell factory	14
Bioreactor-scale cell performance and protein production can be substantially increased by using a secretion signal that drives co-translational translocation in Pichia pastoris	14
Nanobody click chemistry for convenient site-specific fluorescent labelling, single step immunocytochemistry and delivery into living cells by photoporation and live cell imaging	13
Whole-cell biocatalysis using the Acidovorax sp. CHX100 Δ6HX for the production of ω-hydroxycarboxylic acids from cycloalkanes	13
The influence of different carbon sources on growth and single cell oil production in oleaginous yeasts Apiotrichum brassicae and Pichia kudriavzevii	13
The bio-based industries joint undertaking: A high impact initiative that is transforming the bio-based industries in Europe	13
Point-of-care diagnosis of invasive non-typhoidal Salmonella enterica in bloodstream infections using immunomagnetic capture and loop-mediated isothermal amplification	13
Bioplastic production by feeding the marine Rhodovulum sulfidophilum DSM-1374 with four different carbon sources under batch, fed-batch and semi-continuous growth regimes	12
Bioeconomy as a transforming driver of intensive greenhouse horticulture in SE Spain	12
Effect of residence time in continuous photobioreactor on mass and energy balance of microalgal protein production	12
Techno-economic assessment of bioethanol production from lignocellulose by consortium-based consolidated bioprocessing at industrial scale	12
SARS-CoV2 neutralizing activity of ozone on porous and non-porous materials	12
An engineered SARS-CoV-2 receptor-binding domain produced in Pichia pastoris as a candidate vaccine antigen	12
Probing the determinants of the transglycosylation/hydrolysis partition in a retaining α-l-arabinofuranosidase	12
Streamlined life cycle assessment of single use technologies in biopharmaceutical manufacture	12
EasyMAP: A user-friendly online platform for analyzing 16S ribosomal DNA sequencing data	12
Model-based analysis of biocatalytic processes and performance of microbioreactors with integrated optical sensors	12
Making plants into cost-effective bioreactors for highly active antimicrobial peptides	12
Exploring Nordic microalgae as a potential novel source of antioxidant and bioactive compounds	11
Cryopreservation of plant cell cultures – Diverse practices and protocols	11

Synthetic activation of yeast stress response improves secretion of recombinant proteins	11
Fed-batch production assessment of a tetravalent bispecific antibody: A case study on piggyBac stably transfected HEK293 cells	11
Characterization of eubacterial communities by Denaturing Gradient Gel Electrophoresis (DGGE) and Next Generation Sequencing (NGS) in a desulfurization biotrickling filter using progressive changes of	11
Anabolism of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) by Cupriavidus necator DSM 545 from spent coffee grounds oil	11
The Self-Forming Dynamic Membrane BioReactor (SFD MBR) as a suitable technology for agro-industrial wastewater treatment	11
A fattening factor to quantify the accumulation ability of microorganisms under N-starvation	11
Aggregation-prone peptides modulate activity of bovine interferon gamma released from naturally occurring protein nanoparticles	11
Plant-produced bacteriocins inhibit plant pathogens and confer disease resistance in tomato	10
Impact of the pre-examination phase on multicenter metabolomic studies	10
Education for a biobased economy: Integrating life and social sciences in flexible short courses accessible from different backgrounds	10
Effects of nutrient and oxygen limitation, salinity and type of salt on the accumulation of poly(3-hydroxybutyrate) in Bacillus megaterium uyuni S29 with sucrose as a carbon source	10
Chromate fate and effect in bioelectrochemical systems for remediation of chlorinated solvents	10
Micrometric DNA/PEI polyplexes correlate with higher transient gene expression yields in HEK 293 cells	10
Fucoxanthin and docosahexaenoic acid production by cold-adapted Tisochrysis lutea	9
Targeted mutagenesis in plants using Beet curly top virus for efficient delivery of CRISPR/Cas12a components	9
Aerobic granular-based technology for water and energy recovery from municipal wastewater	9
Poly(3-hydroxybutyrate) production from methane in bubble column bioreactors: Process simulation and design optimization	9
Carbohydrate esterase family 16 contains fungal hemicellulose acetyl esterases (HAEs) with varying specificity	9
Mapping the intracellular metabolome of yeast biocapsules - Spherical structures of yeast attached to fungal pellets	9
TILAFeed: A bio-based inventory for circular nutrients management and achieving bioeconomy in future aquaponics	9
A clearing protocol for Galleria mellonella larvae: Visualization of internalized fluorescent nanoparticles	9
Biotransformation of poly(cis-1,4-isoprene) in a multiphase enzymatic reactor for continuous extraction of oligo-isoprenoid molecules	9
A blueprint from nature: miRNome comparison of plasma cells and CHO cells to optimize therapeutic antibody production	9
Engineering endogenous fermentative routes in ethanologenic Escherichia coli W for bioethanol production from concentrated whey permeate	9
Synergistic effects of microbial anaerobic dechlorination of perchloroethene and nano zero-valent iron (nZVI) – A lysimeter experiment	9
Combinatorial synthetic pathway fine-tuning and cofactor regeneration for metabolic engineering of Escherichia coli significantly improve production of D-glucaric acid	9
A multi-omics study to boost continuous bolaform sophorolipid production	9
Novel cis-regulatory elements as synthetic promoters to drive recombinant protein expression from the Chlamydomonas reinhardtii nuclear genome	8
A practical approach for modelling the growth of microalgae with population balance equation	8
Opinion: Independent third-party entities as a model for validation of commercial antibodies	8
Porcine circovirus 2 capsid protein produced in N. benthamiana forms virus-like particles that elicit production of virus-neutralizing antibodies in guinea pigs	8
CRISPR-Cas12a assisted precise genome editing of Mycolicibacterium neoaurum	8
Quality comparison of recombinant soluble proteins and proteins solubilized from bacterial inclusion bodies	8
Bioeconomy triple factor nexus through indicator analysis	8
Comparison of process mass intensity (PMI) of continuous and batch manufacturing processes for biologics	8
A compact nanobody-DNAzyme conjugate enables antigen detection and signal amplification	8
Using galactitol dehydrogenase coupled with water-forming NADH oxidase for efficient enzymatic synthesis of L-tagatose	8
FN3-based monobodies selective for the receptor binding domain of the SARS-CoV-2 spike protein	7
Structural characterization of the family GH115 α-glucuronidase from Amphibacillus xylanus yields insight into its coordinated action with α-arabinofuranosidases	7
Peptone from casein, an antagonist of nonribosomal peptide synthesis: a case study of pedopeptins produced by Pedobacter lusitanus NL19	7
High-throughput screening for heterotrophic growth in microalgae using the Biolog Plate assay	7
Bioprocess intensification: Cases that (don’t) work	7
Towards efficient production of highly optically pure d-lactic acid from lignocellulosic hydrolysates using newly isolated lactic acid bacteria	7
Microalgae harvesting for wastewater treatment and resources recovery: A review	7
Improving the mutagenesis efficiency of the Kunkel method by codon optimization and annealing temperature adjustment	7
From the bacterial citrus microbiome to the selection of potentially host-beneficial microbes	7
Overexpression of Trp-related genes in Claviceps purpurea leading to increased ergot alkaloid production	7
Food biopharmaceuticals as part of a sustainable bioeconomy: Edible vaccines case study	7
In vivo evolution of lactic acid hyper-tolerant Clostridium thermocellum	7
Bioeconomy in Russia: Today and tomorrow	7
Glycoside Hydrolase family 30 harbors fungal subfamilies with distinct polysaccharide specificities	7
The promise of explainable deep learning for omics data analysis: Adding new discovery tools to AI	7
Development of antibodies against the notch ligand Delta-Like-1 by phage display with activity against breast cancer cells	6
Thauera sp. Sel9, a new bacterial strain for polyhydroxyalkanoates production from volatile fatty acids	6
Fast measurement of phosphates and ammonium in fermentation-like media: A feasibility study	6
Pre-analytical sample stabilization by different sampling devices for PCR-based COVID-19 diagnostics	6
CASPON platform technology: Ultrafast circularly permuted caspase-2 cleaves tagged fusion proteins before all 20 natural amino acids at the N-terminus	6
Enzymatic synthesis of wet-resistant lignosulfonate-starch adhesives	6
Phenoplate: An innovative method for assessing interacting effects of temperature and light on non-photochemical quenching in microalgae under chemical stress	6
Imaging of individual transcripts by amplification-based single-molecule fluorescence in situ hybridization	6
Nonionic detergent micelle aggregates: An economical alternative to protein A chromatography	6
Identification of lipolytic enzymes using high-throughput single-cell screening and sorting of a metagenomic library	6
Derivation of splice junction-specific antibodies using a unique hapten targeting strategy and directed evolution	5
Proper definition of the set of autoantibody-targeted antigens relies on appropriate reference group selection	5
Easily applicable modifications to electroporation conditions improve the transformation efficiency rates for rough morphotypes of fast-growing mycobacteria	5
A novel high-throughput approach for transforming filamentous fungi employing a droplet-based microfluidic platform	5
Reshaping nanobodies for affinity purification on protein a	5
Extracellular and intracellular phenol production by microalgae during photoautotrophic batch cultivation	5
Development of anti-human IgM nanobodies as universal reagents for general immunodiagnostics	5
Metabolic processes applied to endangered metal and wood heritage objects: Call a microbial plumber!	5
Closing the loop in bioproduction: Spent microbial biomass as a resource within circular bioeconomy	5
Start-up control for nitrogen removal via nitrite under low temperature conditions for swine wastewater treatment in sequencing batch reactors	5
Combinatorial mutagenesis with alternative CDR-L1 and -H2 loop lengths contributes to affinity maturation of antibodies	5
Combination of sodium butyrate and decitabine promotes transgene expression in CHO cells via apoptosis inhibition	5
The PAR promoter expression system: Modified lac promoters for controlled recombinant protein production in Escherichia coli	5
External Quality Assurance programs for processing methods provide evidence on impact of preanalytical variables	5
A recombinant strain of Komagataeibacter xylinus ATCC 23770 for production of bacterial cellulose from mannose-rich resources	5
Enhancement of a biotechnological platform for the purification and delivery of a human papillomavirus supercoiled plasmid DNA vaccine	5
Accelerostat study in conventional and microfluidic bioreactors to assess the key role of residual glucose in the dimorphic transition of Yarrowia lipolytica in response to environmental stimuli	5
Applicability and information value of biocalorimetry for the monitoring of fungal solid-state fermentation of lignocellulosic agricultural by-products	5