Molecular Informatics

Papers
(The TQCC of Molecular Informatics is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-06-01 to 2026-06-01.)
ArticleCitations
71
Cover Picture: (Mol. Inf. 1/2023)67
Fragment‐based deep molecular generation using hierarchical chemical graph representation and multi‐resolution graph variational autoencoder61
A community effort in SARS‐CoV‐2 drug discovery48
Current Insights on Skin Permeability Data and Quantitative Structure‐Property Relationship Modeling38
Review of the 8th autumn school in chemoinformatics37
Cover Picture: (Mol. Inf. 1/2024)32
Virtual screening of natural products to enhance melanogenosis30
Predicting the duration of action of β2‐adrenergic receptor agonists: Ligand and structure‐based approaches29
Cumulative phylogenetic, sequence and structural analysis of Insulin superfamily proteins provide unique structure‐function insights27
Application of automated machine learning in the identification of multi‐target‐directed ligands blocking PDE4B, PDE8A, and TRPA1 with potential use in the treatment of asthma and COPD24
Drug Search and Design Considering Cell Specificity of Chemically Induced Gene Expression Profiles for Disease‐Associated Tissues23
LapGAT: A Semi‐Supervised Learning Framework for Drug–Target Interaction Prediction23
Cover Picture: (Mol. Inf. 5/2024)21
Cover Picture: (Mol. Inf. 6/2022)18
17
Kinematic analysis of kinases and their oncogenic mutations – Kinases and their mutation kinematic analysis17
16
Predicting the bandgap and efficiency of perovskite solar cells using machine learning methods15
15
Cover Picture: (Mol. Inf. 7/2024)14
Neural Network Models for Prediction of Biological Activity using Molecular Dynamics Data: A Case of Photoswitchable Peptides14
Cover Picture: (Mol. Inf. 6/2024)13
Cover Picture: (Mol. Inf. 4/2025)13
Cover Picture: (Mol. Inf. 11/2023)12
Rapid Assessment of Virtually Synthesizable Chemical Structures via Support Vector Machine Models11
Multi‐Task ADME/PK prediction at industrial scale: leveraging large and diverse experimental datasets**11
Use of tree‐based machine learning methods to screen affinitive peptides based on docking data11
Data‐driven approaches for identifying hyperparameters in multi‐step retrosynthesis11
Natural‐Language Processing (NLP) based feature extraction technique in Deep‐Learning model to predict the Blood‐Brain‐Barrier permeability of molecules11
Cover Picture: (Mol. Inf. 7/2025)10
Structure–Activity Relationships and Design of Focused Libraries Tailored for Staphylococcus Aureus Inhibition10
The VEGA web service: multipurpose online tools for molecular modelling and docking analyses10
Discovery of a pocket network on the domain 5 of the TrkB receptor – A potential new target in the quest for the new ligands9
9
Exploring drug repositioning possibilities of kinase inhibitors via molecular simulation**9
KNIME Workflows for Chemoinformatic Characterization of Chemical Databases9
ADME‐DTI: Augmented Deep Meta Ensemble for Drug–Target Interaction Prediction9
LiProS: Findable, Accessible, Interoperable, and Reusable Data Simulation Workflow to Predict Accurate Lipophilicity Profiles for Small Molecules9
A comparison between 2D and 3D descriptors in QSAR modeling based on bio‐active conformations8
8
8
Cover Picture: (Mol. Inf. 12/2023)8
Cover Picture: (Mol. Inf. 10/2022)8
Cover Picture: (Mol. Inf. 7/2023)8
Deimos: A novel automated methodology for optimal grouping. Application to nanoinformatics case studies7
Distinct binding hotspots for natural and synthetic agonists of FFA4 from in silico approaches**7
Read‐Across Structure‐Property Relationship‐Based Superior Prediction of Fraction Unbound in Plasma from Chemical Structure: Interpretable Models with Minimum Descriptors7
BIOMX‐DB: A web application for the BIOFACQUIM natural product database7
In Silico Identification of Novel and Potent Inhibitors Against Mutant BRAF (V600E), MD Simulations, Free Energy Calculations, and Experimental Determination of Binding Affinity7
7
A Scaffold‐based Deep Generative Model Considering Molecular Stereochemical Information7
Machine Learning in Drug Development for Neurological Diseases: A Review of Blood Brain Barrier Permeability Prediction Models7
Identification of a PD1/PD‐L1 inhibitor by structure‐based pharmacophore modelling, virtual screening, molecular docking and biological evaluation**7
Cover Picture: (Mol. Inf. 10/2024)7
Cover Picture: (Mol. Inf. 8‐9/2023)6
My 50 Years with Chemoinformatics6
Cover Picture: (Mol. Inf. 10/2025)6
A Molecular Representation to Identify Isofunctional Molecules6
6
Predicting S. aureus antimicrobial resistance with interpretable genomic space maps6
6
Feature importance‐based interpretation of UMAP‐visualized polymer space6
6
Spherical GTM: A New Proposition for Visualization of Chemical Data6
Machine Learning Models Predicting Solubility and Polymerizability of Polyimides Considering Multiple Monomers for CO 2 Separation Membranes6
6
AliNA – a deep learning program for RNA secondary structure prediction6
0.12120294570923