Journal of Biophotonics

Article	Citations
Strain and elasticity imaging in compression optical coherence elastography: The two‐decade perspective and recent advances	76
Autofocusing technologies for whole slide imaging and automated microscopy	59
A review of specialty fiber biosensors based on interferometer configuration	58
Surface plasmon resonance biosensor based on graphene layer for the detection of waterborne bacteria	56
Deep learning protocol for improved photoacoustic brain imaging	43
Photoacoustic endoscopy: A progress review	40
Colon cancer detection by using Poincaré sphere and 2D polarimetric mapping of ex vivo colon samples	38
Raman spectroscopy‐based detection of RNA viruses in saliva: A preliminary report	37
Polarization‐dependent second‐harmonic generation for collagen‐based differentiation of breast cancer samples	32
Laser‐induced optothermal response of gold nanoparticles: From a physical viewpoint to cancer treatment application	31
Imaging the invisible—Bioorthogonal Raman probes for imaging of cells and tissues	29
Cold atmospheric plasma applications in dermatology: A systematic review	29
Biophotonic technologies for assessment of breast tumor surgical margins—A review	28
Fluorescence for biological logic gates	27
Effects of photobiomodulation on bone defects grafted with bone substitutes: A systematic review of in vivo animal studies	26
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Detection of living cervical cancer cells by transient terahertz spectroscopy	26
Mesoscopic fluorescence lifetime imaging: Fundamental principles, clinical applications and future directions	25
N2NSR‐OCT: Simultaneous denoising and super‐resolution in optical coherence tomography images using semisupervised deep learning	24
Collagen ultrastructural symmetry and its malignant alterations in human breast cancer revealed by polarization‐resolved second‐harmonic generation microscopy	24
Distinguishing metastatic triple‐negative breast cancer from nonmetastatic breast cancer using second harmonic generation imaging and resonance Raman spectroscopy	24
Profiling antibiotic resistance in Escherichia coli strains displaying differential antibiotic susceptibilities using Raman spectroscopy	23
Detecting hemodynamic changes in the foot vessels of diabetic patients by photoacoustic tomography	23
Quantification of diabetic macular ischemia using novel three‐dimensional optical coherence tomography angiography metrics	22
Line field confocal optical coherence tomography: An adjunctive tool in the diagnosis of autoimmune bullous diseases	22

Rapid identification of human ovarian cancer in second harmonic generation images using radiomics feature analyses and tree‐based pipeline optimization tool	21
Optimal hyperosmotic agents for tissue immersion optical clearing in terahertz biophotonics	21
Angular optimization for cancer identification with circularly polarized light	21
Therapeutic prognosis of prostate cancer using surface‐enhanced Raman scattering of patient urine and multivariate statistical analysis	20
In vivo optoretinography of phototransduction activation and energy metabolism in retinal photoreceptors	20
Blue photobiomodulation LED therapy impacts SARS‐CoV‐2 by limiting its replication in Vero cells	20
Comparative study of deep neural networks with unsupervised Noise2Noise strategy for noise reduction of optical coherence tomography images	20
A graphical user interface (NWUSA) for Raman spectral processing, analysis and feature recognition	20
Magnetic resonance contrast agents in optical clearing: Prospects for multimodal tissue imaging	19
Development of concurrent magnetic resonance imaging and volumetric optoacoustic tomography: A phantom feasibility study	19
Biophotonics methods for functional monitoring of complications of diabetes mellitus	19
Label‐free discrimination and selection of cancer cells from blood during flow using holography‐induced dielectrophoresis	19
In vivo detection of head and neck tumors by hyperspectral imaging combined with deep learning methods	19
Rapid analysis of disease state in liquid human serum combining infrared spectroscopy and “digital drying”	18
LV‐GAN: A deep learning approach for limited‐view optoacoustic imaging based on hybrid datasets	17
Impairments of cerebral blood flow microcirculation in rats brought on by cardiac cessation and respiratory arrest	17
Functional imaging of human retina using integrated multispectral and laser speckle contrast imaging	17
Visible‐near infrared‐II skull optical clearing window for in vivo cortical vasculature imaging and targeted manipulation	17
Cancer cell‐specific protein delivery by optoporation with laser‐irradiated gold nanorods	16
Surface‐enhanced Raman scattering analysis of serum albumin via adsorption‐exfoliation on hydroxyapatite nanoparticles for noninvasive cancers screening	16
Rapid and accurate identification of pathogenic bacteria at the single‐cell level using laser tweezers Raman spectroscopy and deep learning	16
Bark beetles as lidar targets and prospects of photonic surveillance	15
Transcranial low‐level laser therapy in an in vivo model of stroke: Relevance to the brain infarct, microglia activation and neuroinflammation	15
Lipids status and copper in a single astrocyte of the rat model for amyotrophic lateral sclerosis: Correlative synchrotron‐based X‐ray and infrared imaging	15
Automatic imaging of Drosophila embryos with light sheet fluorescence microscopy on chip	15
Dissolving microneedles containing aminolevulinic acid improves protoporphyrin IX distribution	15
Optically activated and interrogated plasmonic hydrogels for applications in wound healing	15
Urine analysis using FTIR spectroscopy: A study on healthy adults and children	15
Immunofluorescence and histopathological assessment using ex vivo confocal laser scanning microscopy in lichen planus	15
Instant polarized light microscopy for imaging collagen microarchitecture and dynamics	15
Line‐field confocal optical coherence tomography as a tool for three‐dimensional in vivo quantification of healthy epidermis: A pilot study	14
A new strategy for canine visceral leishmaniasis diagnosis based on FTIR spectroscopy and machine learning	14
Optical incoherent technique for noninvasive assessment of blood flow in tissues: Theoretical model and experimental study	14
Comprehensive histological imaging of native microbiota in human glioma	14
Transcranial photobiomodulation attenuates pentylenetetrazole‐induced status epilepticus in peripubertal rats	14
Raman spectroscopy of human skin for kidney failure detection	14
Deep convolutional neural network recovers pure absorbance spectra from highly scatter‐distorted spectra of cells	14
Role of blood oxygenation saturation in ovarian cancer diagnosis using multi‐spectral photoacoustic tomography	14
Attenuation corrected‐optical coherence tomography for quantitative assessment of skin wound healing and scar morphology	14
Depolarization metric spaces for biological tissues classification	14
Organic solvent‐based tissue clearing techniques and their applications	13
In vivo noninvasive measurement of spatially resolved corneal elasticity in human eyes using Lamb wave optical coherence elastography	13
Ex vivo three‐dimensional elemental imaging of mouse brain tissue block by laser‐induced breakdown spectroscopy	13
Antimicrobial activity of amphiphilic nanomicelles loaded with curcumin against Pseudomonas aeruginosa alone and activated by blue laser light	13
Fluorescence cross‐correlation spectroscopy as a valuable tool to characterize cationic liposome‐DNA nanoparticle assembly	13
A hyperspectral dataset of precancerous lesions in gastric cancer and benchmarks for pathological diagnosis	13
Optical properties of human brain and tumour tissue: An ex vivo study spanning the visible range to beyond the second near‐infrared window	13
Photobiomodulation and estrogen stabilize mitochondrial membrane potential in angiotensin–II challenged porcine aortic smooth muscle cells	12
Jones matrix‐based speckle‐decorrelation angiography using polarization‐sensitive optical coherence tomography	12
Smart laparoscopic grasper integrated with fiber Bragg grating based tactile sensor for real‐time force feedback	12

Front Cover: Photoacoustic imaging of the human placental vasculature (J. Biophotonics 4/2020)	12
Effects of cold atmospheric pressure plasma and disinfecting agents on Candida albicans in root canals of extracted human teeth	12
Label‐free high frame rate imaging of circulating blood clots using a dual modal ultrasound and photoacoustic system	12
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Photoacoustic and ultrasound (PAUS) dermoscope with high sensitivity and penetration depth by using a bimorph transducer	12
Automated detection of apoptotic versus nonapoptotic cell death using label‐free computational microscopy	12
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Randomized multi‐angle illumination for improved linear array photoacoustic computed tomography in brain	12
In vitro effects of photobiomodulation therapy on 50B11 sensory neurons: evaluation of cell metabolism, oxidative stress, mitochondrial membrane potential (MMP), and capsaicin‐in	12
Evolution of raw meat polarization‐based properties by means of Mueller matrix imaging	12
Concept of photonic hook scalpel generated by shaped fiber tip with asymmetric radiation	12
Investigating the feasibility of spatially offset Raman spectroscopy for in‐vivo monitoring of bone healing in rat calvarial defect models	12
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Dual‐peak long period fiber grating coated with graphene oxide for label‐free and specific assays of H5N1 virus	11
Repetitive transcranial photobiomodulation but not long‐term omega‐3 intake reduces epileptiform discharges in rats with stroke‐induced epilepsy	11
Breath indeed carries significant information about a disease: Potential biomarkers of cerebral palsy	11
Supervised learning methods for the recognition of melanoma cell lines through the analysis of their Raman spectra	11
First experience in clinical application of hyperspectral endoscopy for evaluation of colonic polyps	11
Dual‐color STED super‐resolution microscope using a single laser source	11
Raman mapping coupled to self‐modelling MCR‐ALS analysis to estimate active cosmetic ingredient penetration profile in skin	11
Imaging photoplethysmography and videocapillaroscopy enable noninvasive study of zebrafish cardiovascular system functioning	11
Thermodynamic basis for comparative photobiomodulation dosing with multiple wavelengths to direct odontoblast differentiation	11
Label‐free optical antibody testing kit based on a self‐assembled whispering‐gallery‐mode microsphere	11
Diffuse optical assessment of cerebral‐autoregulation in older adults stratified by cerebrovascular risk	10
Non‐local means improves total‐variation constrained photoacoustic image reconstruction	10
Low‐dose photodynamic therapy effect on closure of scratch wounds of normal and diabetic fibroblast cells: An in vitro study	10
Computed tomography for in vivo deep over‐1000 nm near‐infrared fluorescence imaging	10
A pilot study for early detection of oral premalignant diseases using oral cytology and Raman micro‐spectroscopy: Assessment of confounding factors	10
Guided filter based image enhancement for focal error compensation in low cost automated histopathology microscopic system	10
Effective photodynamic treatment of Trichophyton species with Rose Bengal	10
Use of photoacoustic imaging for monitoring vascular disrupting cancer treatments	10
Emerging potential of phototherapy in management of symptomatic oral lichen planus: A systematic review of randomised controlled clinical trials	10
Efficient super‐resolution volumetric imaging by radial fluctuation Bayesian analysis light‐sheet microscopy	10
Raman confocal microscopy and biophysics multiparametric characterization of the skin barrier evolution with age	10
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Circulating microRNA breast cancer biomarker detection in patient sera with surface plasmon resonance imaging biosensor	10
3D‐PulCNN: Pulmonary cancer classification from hyperspectral images using convolution combination unit based CNN	10
Long‐term and in vivo assessment of Aβ protein‐induced brain atrophy in a zebrafish model by optical coherence tomography	10
Accelerated Fourier ptychographic diffraction tomography with sparse annular LED illuminations	10
Integrated photoacoustic and hyperspectral dual‐modality microscopy for co‐imaging of melanoma and cutaneous squamous cell carcinoma in vivo	10
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X‐ray luminescence computed tomography using a hybrid proton propagation model and Lasso‐LSQR algorithm	10
Optoacoustic monitoring of water content in tissue phantoms and human skin	10
Investigation of genomic DNA methylation by ultraviolet resonant Raman spectroscopy	10
A novel automatic 3D stitching algorithm for optical coherence tomography angiography and its application in dermatology	9
Speckle contrast diffuse correlation tomography of cerebral blood flow in perinatal disease model of neonatal piglets	9
The near‐infrared autofluorescence fingerprint of the brain	9
3D‐Printed high‐NA catadioptric thin lens for suppression of XPM background in Stimulated Raman Scattering microscopy	9
Current research and future prospects of IVOCT imaging‐based detection of the vascular lumen and vulnerable plaque	9
Fast denoising and lossless spectrum extraction in stimulated Raman scattering microscopy	9
Time‐gated luminescence imaging of positively charged poly‐l‐lysine‐coated highly microporous silicon nanoparticles in living Hydra polyp	9
Detecting mouse squamous cell carcinoma from submicron full‐field optical coherence tomography images by deep learning	9
In vivo non‐contact measurement of human iris elasticity by optical coherence elastography	9
Photobiomodulation therapy drives massive epigenetic histone modifications, stem cells mobilization and accelerated epithelial healing	9
Photobiomodulation therapy for treatment olfactory and taste dysfunction COVID‐19‐related: A case report	9
Label‐free differentiation of clinical E. coli and Klebsiella isolates with Raman spectroscopy	9
Laser‐assisted nucleic acid delivery: A systematic review	9
Human colorectal cancer tissue assessment using optical coherence tomography catheter and deep learning	9
Redox ratio in the left ventricle of the growth restricted fetus is positively correlated with cardiac output	9
Development of an imaging device for label‐free parathyroid gland identification and vascularity assessment	9
Raman 18O‐labeling of bacteria in visible and deep UV‐ranges	9
Simultaneous immunofluorescence and histology in pemphigus vulgaris using ex vivo confocal laser scanning microscopy	9
Multisite cell‐ and neural‐dynamics‐resolving deep brain imaging in freely moving mice with implanted reconnectable fiber bundles	9
Safety and delivery efficiency of a photodynamic treatment of the lungs using indocyanine green and extracorporeal near infrared illumination	9
Physics‐based learning with channel attention for Fourier ptychographic microscopy	8
Snapshot polarized light scattering spectroscopy using spectrally‐modulated polarimetry for early gastric cancer detection	8
Evaluation of corneal structures in myopic eyes more than twenty‐two years after photorefractive keratectomy	8
Quantitative label‐free optical technique to analyze the ultrastructure changes and spatiotemporal relationship of enamel induced by Msx2 deletion	8
Intraspecific differentiation of sandflies specimens by optical spectroscopy and multivariate analysis	8
Improved accuracy of quantitative birefringence imaging by polarization sensitive OCT with simple noise correction and its application to neuroimaging	8
Grayscale representation of infrared microscopy images by extended multiplicative signal correction for registration with histological images	8
Detection of gene mutation responsible for Huntington's disease by terahertz attenuated total reflection microfluidic spectroscopy	8
Volumetric data analysis enabled spatially resolved optoretinogram to measure the functional signals in the living retina	8
Diagnosing colorectal abnormalities using scattering coefficient maps acquired from optical coherence tomography	8
Myoblast adhesion and proliferation on biodegradable polymer films with femtosecond laser‐fabricated micro through‐holes	8
Whole‐organ transdermal photobiomodulation (PBM) of COVID‐19: A 50‐patient case study	8
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High‐fidelity compression for high‐throughput photoacoustic microscopy systems	8
Dependence of laser‐induced optical breakdown on skin type during 1064 nm picosecond laser treatment	8
Hyperspectral imaging and characterization of allergic contact dermatitis in the short‐wave infrared	8

Movement correction method for laser speckle contrast imaging of cerebral blood flow in cranial windows in rodents	8
Indocyanine green‐enhanced multimodal photoacoustic microscopy and optical coherence tomography molecular imaging of choroidal neovascularization	8
Raman microspectroscopic study for the detection of oral field cancerisation using brush biopsy samples	7
High‐fluence light emitting diode‐red light inhibits cell cycle progression in human dermal fibroblasts	7
Microlens‐assisted microscopy for biology and medicine	7
Machine learning of diffraction image patterns for accurate classification of cells modeled with different nuclear sizes	7
Mitochondrial dynamics and quantification of mitochondria‐derived vesicles in cardiomyoblasts using structured illumination microscopy	7
Characterization of optical clearing mechanisms in muscle during treatment with glycerol and gadobutrol solutions	7
In vivo Raman spectroscopy for bladder cancer detection using a superficial Raman probe compared to a nonsuperficial Raman probe	7
Optogenetic approaches for termination of ventricular tachyarrhythmias after myocardial infarction in rats in vivo	7
Recovering the osteoblastic differentiation potential of mesenchymal stem cells derived from diabetic rats by photobiomodulation therapy	7
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Quantitative assessment of optical coherence tomography angiography algorithms for neuroimaging	7
Rapid intraoperative diagnosis of gynecological cancer by ATR‐FTIR spectroscopy of fresh tissue biopsy	7
Advanced fully integrated radiofrequency/optical‐coherence‐tomography irrigated catheter for atrial fibrillation ablation	7
Imaging approaches for monitoring three‐dimensional cell and tissue culture systems	7
Polarization‐resolved SHG imaging as a fast screening method for collagen alterations during aging: Comparison with light and electron microscopy	7
Unveiling dose‐ and time‐dependent osteosarcoma cell responses to the γ‐secretase inhibitor, DAPT, by confocal Raman microscopy	7
Longitudinal assessment of the effect of alkali burns on corneal biomechanical properties using optical coherence elastography	7
Towards quantitative assessment of burn based on photoacoustic and optical coherence tomography	7
Visibility of microvessels in Optical Coherence Tomography angiography depends on angular orientation	7
Light propagation within N95 filtered face respirators: A simulation study for UVC decontamination	7
Effects of photobiomodulation in experimental spinal cord injury models: A systematic review	7
Orthogonal‐polarization‐gating optical coherence tomography for human sweat ducts in vivo	7
Histopathological correlations of bulk tissue polarimetric images: Case study	7
Photobiomodulation at a wavelength of 633 nm leads to faster functional recovery than 804 nm after facial nerve injury	7
Novel input polarisation independent endoscopic cross‐polarised optical coherence tomography probe	7
Cortex‐wide microcirculation mapping with ultrafast large‐field multifocal illumination microscopy	7
Fluorescence lifetime metabolic mapping of hypoxia‐induced damage in pancreatic pseudo‐islets	7
Can photobiomodulation restore anosmia and ageusia induced by COVID‐19? A pilot clinical study	7
Automated and rapid identification of multidrug resistant Escherichia coli against the lead drugs of acylureidopenicillins, cephalosporins, and fluoroquinolones using specific Raman marker bands	7
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Near‐infrared emissive polymer‐coated IR‐820 nanoparticles assisted photothermal therapy for cervical cancer cells	7
Engineering a better light sheet in an axicon‐based system using a flattened Gaussian beam of low order	7
Interferometric optical fiber sensor for optoacoustic endomicroscopy	7
Multimodal system for optical biopsy of melanoma with integrated ultrasound, optical coherence tomography and Raman spectroscopy	7
Feasibility of Raman spectroscopy as a potential in vivo tool to screen for pre‐diabetes and diabetes	7
Improved segmentation of collagen second harmonic generation images with a deep learning convolutional neural network	7
Microfocusing sapphire capillary needle for laser surgery and therapy: Fabrication and characterization	7
Pixel‐level angular quantification of capsular collagen in second harmonic generation microscopy images of encapsulated thyroid nodules	7
In situ measurement of the isoplanatic patch for imaging through intact bone	7
Multiphoton tomography in differentiation of morphological and molecular subtypes of breast cancer: A quantitative analysis	6
Surface plasmon resonance based‐optical biosensor: Emerging diagnostic tool for early detection of diseases	6
Histological and biochemical effects of preventive and therapeutic vascular photobiomodulation on rat muscle injury	6
Application of mid‐infrared microscopic imaging for the diagnosis and classification of human lymphomas	6
Grade classification of human glioma using a convolutional neural network based on mid‐infrared spectroscopy mapping	6
High‐resolution single‐shot phase‐shifting interference microscopy using deep neural network for quantitative phase imaging of biological samples	6
Deep‐learning‐based motion correction in optical coherence tomography angiography	6
Reorganization of prefrontal network in stroke patients with dyskinesias: evidence from resting‐state functional near‐infrared spectroscopy	6
Reactive oxygen species generated by infrared laser light in optical tweezers inhibits the germination of bacterial spores	6
Ex‐vivo fluorescence confocal microscopy with digital staining for characterizing basal cell carcinoma on frozen sections: A comparison with histology	6
Light emitting diode‐red light for reduction of post‐surgical scarring: Results from a dose‐ranging, split‐face, randomized controlled trial	6
Ripening of avocado fruits studied by spectroscopic techniques	6
Size‐adjustable ring‐shape photoacoustic tomography imager in vivo	6
In vivo sensing of rabbit cornea by terahertz technology	6
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A coaxial excitation, dual‐red‐green‐blue/near‐infrared paired imaging system toward computer‐aided detection of parathyroid glands in situ and ex vivo	6
Spatial autocorrelation analysis on two‐dimensional images of Mueller matrix for diagnosis and differentiation of cervical precancer	6
Deep learning: step forward to high‐resolution in vivo shortwave infrared imaging	6
Translation of an esophagus histopathological FT‐IR imaging model to a fast quantum cascade laser modality	6
Highlighting nuances of blue light phototherapy: Mechanisms and safety considerations	6
Vascular changes precede tomographic changes in diabetic eyes without retinopathy and improve artificial intelligence diagnostics	6
Raman spectroscopy of blood and urine liquid biopsies for ovarian cancer diagnosis: identification of chemotherapy effects	6
Detection of oral squamous cell carcinoma with ex vivo fluorescence confocal microscopy: Sensitivity and specificity compared to histopathology	6
Peri‐tumoural stroma collagen organization of invasive ductal carcinoma assessed by polarized light microscopy differs between OncotypeDX risk group	6
Vibrational two‐photon microscopy for tissue imaging: Short‐wave infrared surface‐enhanced resonance hyper‐Raman scattering	6
Multifunctional plasmonic gold nanostars for cancer diagnostic and therapeutic applications	6
Development of multimodal micro‐endoscopic system with oblique illumination for simultaneous fluorescence imaging and spectroscopy of oral cancer	6
A rapid white blood cell classification system based on multimode imaging technology	6
Optimization of spatial resolution and scattering effects for biomedical fluorescence imaging by using sub‐regions of the shortwave infrared spectrum	6
Soft‐tissue spectral subtraction improves transcutaneous Raman estimates of murine bone strength in vivo	6
Continuous assessment of metabolic activity of mitochondria using resonance Raman microspectroscopy	6
Automated vessel diameter quantification and vessel tracing for OCT angiography	6
3D morphological and biophysical changes in a single tachyzoite and its infected cells using three‐dimensional quantitative phase imaging	6
Single‐shot phase contrast microscopy using polarisation‐resolved differential phase contrast	6
High throughput slanted scanning whole slide imaging system for digital pathology	6
Computational image translation from Mueller matrix polarimetry to bright‐field microscopy	6
Label‐free detection of living cervical cells based on microfluidic device with terahertz spectroscopy	6
An autofocus algorithm considering wavelength changes for large scale microscopic hyperspectral pathological imaging system	5
Zebrafish brain and skull imaging based on polarization‐sensitive optical coherence tomography	5
Multimodal vibrational studies of drug uptake in vitro: Is the whole greater than the sum of their parts?	5
Effect of hemolysis on Fourier transform infrared and Raman spectra of blood plasma	5
In vivo dynamic characterization of the human tympanic membrane using pneumatic optical coherence tomography	5
Computer‐aided Veress needle guidance using endoscopic optical coherence tomography and convolutional neural networks	5
Digital holographic technique based breast cancer detection using transfer learning method	5
Toward the development of portable light emitting diode‐based polarization spectroscopy tools for breast cancer diagnosis	5
Spectrophotometric evaluation of hemolysis in plasma by quantification of free oxyhemoglobin, methemoglobin, and methemalbumin in presence of bilirubin	5
Stimulatory responses in α‐ and β‐cells by near‐infrared (810 nm) photobiomodulation	5
Polarimetric optical scanning microscopy of zebrafish embryonic development using the coherency matrix	5
Development of ex vivo brain hemorrhage phantom for photoacoustic imaging	5
Estimating quantitative physiological and morphological tissue parameters of murine tumor models using hyperspectral imaging and optical profilometry	5
Measurement of cartilage sub‐component distributions through the surface by Raman spectroscopy‐based multivariate analysis	5
The early effects of uninephrectomy on rat kidney metabolic state using optical imaging	5
Label‐free identification of human glioma xenograft of mouse brain with quantitative ultraviolet photoacoustic histology imaging	5
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