Proteomics Clinical Applications

Article	Citations
	54
Parallel accumulation‐serial fragmentation method for in‐depth proteomic analysis of bronchoalveolar lavage fluid collected from patients with nonsmall cell lung cancer	52
Plasma proteomics identify potential severity biomarkers from COVID‐19 associated network	37
Identification of a potential prognostic plasma biomarker of acute ischemic stroke via untargeted LC‐MS metabolomics	31
Current advances in antibody‐based serum biomarker studies: From protein microarray to phage display	30
Editorial Board: Proteomics 6'22	26
Front Cover	23
Masthead: Proteomics 2'23	21
Non‐Targeted Analysis of Extracellular Vesicle‐Enriched Plasma Proteome Between Early and Late Rugby Playing Career	19
Liver Tissue Proteins Improve the Accuracy of Plasma Proteins as Biomarkers in Diagnosing Metabolic Dysfunction‐Associated Steatohepatitis	19
Peptidomics in Different Phases of Severe Acute Pancreatitis Model	17
Application of Proteomics in Maternal and Neonatal Health: Advancements and Future Directions	16
Design of experiments approach for systematic optimization of a single‐shot diaPASEF plasma proteomics workflow applicable for high‐throughput	13
Proteomic Analysis of Cerebrospinal Fluid from Severe COVID‐19 Patients Reveals Prognostic Biomarkers Associated with Disease Outcome	11
Masthead: Proteomics 5'22	11
Proteomics and bioinformatics investigations to improve serological diagnosis of canine brucellosis	11
Comprehensive characterization of protein modifications using mass spectrometry and dry blood spots	10
Salivary Proteome Is Altered in Children With Small Area Thermal Burns	10
Classification of Acid and Alkaline Enzymes Based on Normalized Van der Waals Volume Features	10
Associations of inflammation‐related proteome with demographic and clinical characteristics of people with HIV in South Africa	10
Proteomic profiling of idiopathic Parkinson's disease primary patient cells by SWATH‐MS	9
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Impact of Epicatechin Supplementation on Plasma Proteome Profiles in Obese Men and Women—An Exploratory Approach to Sexual Dimorphism	9
Plasma Proteomic Profiling of a Group of Anxious Dogs by LC‐MS/MS: A Case–Control Study	8
Masthead: Proteomics 1'24	8

Front Cover	8
Editorial Board: Proteomics 2'23	7
Editorial Board: Proteomics 1'23	7
Proteomic and lipidomic biomarkers in the diagnosis and progression of inflammatory bowel disease – a review	7
Editorial Board: Proteomics 5'23	7
Masthead: Proteomics 6'24	7
Masthead: Proteomics 6'22	6
The crosstalking of lactate‐Histone lactylation and tumor	6
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Development of a protein microarray for profiling circulating autoantibodies in human diseases	6
Issue Information: Proteomics 1'26	5
Characterisation of Platelet Releasate Proteome in Relapsing‐Remitting Multiple Sclerosis Reveals Dysregulation of Inflammatory Signalling and Extracellular Vesicle Dynamics	5
Proteomics Analysis of Human Chorionic Villi Reveals Dysregulated Pathways That Contribute to Recurrent Pregnancy Loss	5
Proteomic insights into Helcococcus kunzii in a diabetic foot ulcer‐like environment	5
Front Cover	5
Proteomic Analysis of Substantia Nigra Reveals Molecular Insights Into the Neuroprotection Effect of Rosmarinic Acid Treatment in MPTP‐Induced Mouse Model of Parkinson's Disease	5
Editorial Board: Proteomics 3'24	5
Intraoperative plasma proteomic changes in cardiac surgery: In search of biomarkers of post‐operative delirium	5
Mass spectrometry‐based proteomic applications in dental implants research	5
Issue Information: Proteomics 3'25	5
Tape stripped stratum corneum samples are suitable for diagnosis and comprehensive proteomic investigation in mycosis fungoides	4
Global Profiling of Lysine Ubiquitylation in the Human Hypothalamus	4
Front Cover	4
Proteoglycans in breast cancer, identification and characterization by LC‐MS/MS assisted proteomics approach: A review	4
Front Cover	4
Activity‐Based Proteome Profiling of Serum Serine Hydrolases: Application in Pediatric Abusive Head Trauma	4
Serum Proteomics of Ribociclib‐Mediated Cardiovascular Toxicity: An Exploratory Case–Control Study	4
ECMHA‐PP: A Breast Cancer Prognosis Prediction Model Based on Energy‐Constrained Multi‐Head Self‐Attention	4
Editorial Board: Proteomics 1'24	4
Protein sample preparation for tissue distribution study	4
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Serum proteomics profiling identifies a preliminary signature for the diagnosis of early‐stage lung cancer	4
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Quantifying Protein Acetylation in Diabetic Nephropathy from Formalin‐Fixed Paraffin‐Embedded Tissue	3
Proteome of Renal Tubuli and Serum Differentiate Pre‐Existing Type 2 Diabetes and Post‐Transplant Diabetes in Kidney Transplant Recipients	3
Characterization of the Metabolic Proteome of Serum From Patients With Diabetic Distal Symmetric Polyneuropathy	3
A Comparison of Emotionally Stimulated and Conventionally Collected Tears Using Bottom‐Up, Label‐Free Quantitative Proteomic Analysis—A Pilot Study	3
Masthead: Proteomics 3'22	3
Issue Information: Proteomics 4'25	3
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Proteomic Analysis of Fibroblasts Exposed to Resin Composite Release	3
Masthead: Proteomics 4'23	3
Comparing Venous vs. Capillary Blood Collection Methods for Proteomic Measurement in Peripheral Blood	3
Quantitative comparison of the renal pelvic urine and bladder urine to examine modifications of the urine proteome by the lower urinary tract	3
Analytical validation of a multi‐protein, serum‐based assay for disease activity assessments in multiple sclerosis	3
Editorial Board: Proteomics 6'23	3
Editorial Board: Proteomics 2'24	3
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Editorial Board: Proteomics 4'23	3
Systematic evaluation of plasma signaling cascades by functional proteomics approaches: SARS‐CoV‐2 infection as model	3

Integrative analysis of transcriptome and proteome profiles in primary and recurrent glioblastoma	3
Tandem mass tag‐based quantitative proteomic analysis of cervical cancer	3
A comparative proteomic analysis for non‐invasive early prediction of hypoxic‐ischemic injury in asphyxiated neonates	2
Masthead: Proteomics 3'24	2
Proteomic profiling of human bone from different anatomical sites – A pilot study	2
Comparative proteomics of saliva of healthy and gingivitis individuals from Rio de Janeiro	2
Development of multiple reaction monitoring (MRM) assays to identify Brucella abortus proteins in the serum of humans and livestock	2
Editorial Board: Proteomics 5'22	2
Editorial Board: Proteomics 6'24	2
Immune Landscape Changes in MASLD and the Effects of 11β‐HSD1 Inhibition Revealed by Single‐Cell Mass Cytometry	2
The Contribution and Perspectives of Proteomics to Epithelial Ovarian Cancer	2
A Standard Operating Procedure for Protein Extraction From Abdominal Aortic Aneurysm Tissue: Enhancing Proteomics Applications	2
Mass Spectrometric and Artificial Intelligence‐Based Identification of the Secretome of Plasmodium falciparum Merozoites to Provide Novel Candidates for Vaccine Development Pipeline	2
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Proteomics and Metabolomics Study on the Responses of Sertoli Cells Infected With Brucella and Its bvfA‐Deletion Strains	2
Editorial Board: Proteomics 4'24	2
Mass spectrometry‐based proteomic profiling of sonicate fluid differentiates Staphylococcus aureus periprosthetic joint infection from non‐infectious failure: A pilot study	2
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On the Ocean of Biomarkers for the Precise Diagnosis and Prognosis of Lung Diseases	2
Proteomic Biomarkers Are Linked to QTc Interval in Patients With Chronic Heart Failure	2
Issue Information: Proteomics 2'26	1
Issue Information: Proteomics 2'25	1
Editorial Board: Proteomics 5'24	1
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Methods and clinical biomarker discovery for targeted proteomics using Olink technology	1
A protein microarray‐based serum proteomic investigation reveals distinct autoantibody signature in colorectal cancer	1
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Issue Information: Proteomics 3'26	1
Proteomics and phosphoproteomics analysis of vitreous in idiopathic epiretinal membrane patients	1
Computational Insight in the Identification of Non‐Synonymous Single‐Nucleotide Polymorphism Affecting the Structure and Function of Interleukin‐4	1
Advancements in Single‐Cell Proteomics and Mass Spectrometry‐Based Techniques for Unmasking Cellular Diversity in Triple Negative Breast Cancer	1
Plasma proteome analysis and validation of patients with community‐acquired pneumonia: A cohort study	1
Proteomic Correlates of Vitamin D Supplementation in the Atherosclerosis Risk in Communities (ARIC) Study	1
Research progress in protein microarrays: Focussing on cancer research	1
A novel micropeptide, Slitharin, exerts cardioprotective effects in myocardial infarction	1
Pressure Cycling Technology Combined With MicroLC‐SWATH Mass Spectrometry for the Analysis of Sex‐Related Differences Between Male and Female Cerebella: A Promising Approach to Investigating Proteomic	0
Front Cover	0
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Correction to “Identification of Novel Biomarkers for Frailty Diagnosis Via Serum Amino Acids Metabolomic Analysis Using UPLC‐MS/MS”	0
Front Cover	0
Proteomic analysis of extracellular vesicle cargoes mirror the cardioprotective effects of rivaroxaban in patients with venous thromboembolism	0
Hormonal Contraceptives and Depression: A Proteomic Analysis Using Neuronal Models	0
Quantitative proteomic analysis of bronchoalveolar lavage fluids from patients with small cell lung cancers	0
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Understanding LC/MS‐Based Metabolomics: A Detailed Reference for Natural Product Analysis	0
Amniotic fluid metabolomics identifies impairment of glycerophospholipid and amino acid metabolism during congenital Zika syndrome development	0
Proteomic and metabolomic characterization of bone, liver, and lung metastases in plasma of breast cancer patients	0
Interpretable Machine Learning for Proteomics‐Based Subtyping and Tumor Mutational Burden Prediction in Endometrial Cancer	0
Masthead: Proteomics 4'22	0
Proteome Profiles of Hypercholesterolemic Patients with and Without FH Treated with a PCSK9 Inhibitor: A Comparison of Depleted and Nondepleted Samples in a Pilot Study	0
Optimised plasma sample preparation and LC‐MS analysis to support large‐scale proteomic analysis of clinical trial specimens: Application to the Fenofibrate Intervention and Event Lowering in Diabetes	0
Plasma biomarkers for systemic inflammation in COVID‐19 survivors	0
Proteomics reveals unique plasma signatures in constitutional thinness	0
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Bioinformatics‐Based Comparative Analysis of the Human Retina Proteome	0
Comparative salivary proteomics analysis of children with and without early childhood caries using the DIA approach: A pilot study	0
Subcellular proteomics insights into Alzheimer's disease development	0
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Increased Serum Levels of LDHA and TPI1 in Patients With Polycystic Ovary Syndrome	0
Editorial Board: Proteomics 3'23	0
Front Cover	0
dRama: Differential Ramachandran Plot as a Tool to Analyze Subtle Changes in Protein Secondary Structure	0
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Front Cover	0
Masthead: Proteomics 3'23	0
Analysis of Crosstalk Between Pathogens and Immune System in Human Airway Mucus via Machine Learning‐Enhanced DIA Mass Spectrometry	0
Front Cover	0
TMT‐Based Quantitative Proteomic Profiling of Human Esophageal Cancer Cells Reveals the Potential Mechanism and Potential Therapeutic Targets Associated With Radioresistance	0
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Evaluation of autoantibody signatures in pituitary adenoma patients using human proteome arrays	0
Pilot proteomic study of locally advanced rectal cancer before and after neoadjuvant chemoradiotherapy indicates high metabolic activity in non‐responders' tumor tissue	0
Potential functionality of Cutibacterium acnes extracellular vesicles in atopic dermatitis and acne vulgaris: A comparative proteomic analysis	0
Global Profiling of Protein Lactylation in Human Hippocampi	0
Identification of potential extracellular vesicle protein markers altered in osteosarcoma from public databases	0
Proteomic Investigation of Human Dental Pulp to Identify Individuals Who Are Pregnant	0
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Machine Learning‐Driven Discovery of Essential Binding Preference in Anti‐CRISPR Proteins	0
Issue Information: Proteomics 1'25	0
Masthead: Proteomics 6'23	0

Clinical applications of plasma proteomics and peptidomics: Towards precision medicine	0
Integrated Proteomic and Transcriptomic Analysis of Adipose Tissue‐Derived Small Extracellular Vesicles in Ischemic Stroke	0
Comparisons of Whole Saliva and Cell Free Saliva by DIA‐Based Proteome Profiling	0
Association analysis of hepatocellular carcinoma‐related hub proteins and hub genes	0
The functional roles of m6A modification in prostate cancer	0
Valosin‐containing protein (VCP/p97) is prognostically unfavorable in pediatric AML, and negatively correlates with unfolded protein response proteins IRE1 and GRP78: A report from the Children's Onco	0
Editorial Board: Proteomics 3'22	0
Proteomic changes of botulinum neurotoxin injection on muscle growth in children with spastic cerebral palsy	0
Analysis of Unfolded Protein Response Activation in Colon Adenocarcinoma Epithelial Cells: A Proteomic Study	0
Issue Information: Proteomics 6'25	0
Artificial Intelligence in Proteomics Clinical Applications	0
Rare HER2 L796P missense mutation promotes the growth and oncogenic signaling in breast cancer cells	0
Advances in plasma proteomics: Moving from technology to precision medicine	0
Fast and straightforward simultaneous quantification of multiple apolipoproteins in human serum on a high‐throughput LC‐MS/MS platform	0
Systemic Changes in Early Pregnancy in the Mare: An Integrated Proteomic Analysis of Blood Plasma, Histotroph, and Yolk Sac Fluid at Day 14 Post‐Ovulation	0
Human peripheral blood mononuclear cells as a valuable source of disease‐related biomarkers: Evidence from comparative proteomics studies	0
“Hide and seek”: Misleading transferrin variants in PMM2‐CDG complicate diagnostics	0
Comprehensive profiling of the human fecal proteome from IBD patients with DIA‐MS enables evaluation of disease‐relevant proteins	0
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Targeted Proteomic Analysis of Sickle Cell Disease Patients With Elevated Tricuspid Regurgitation Velocity	0
Front Cover	0
Detection of recombinant Spike protein in the blood of individuals vaccinated against SARS‐CoV‐2: Possible molecular mechanisms	0
A Network‐Based Association of IBD and Colorectal Cancer Using Proteomics Data	0
In Search of Candidate Protein Biomarkers Related to COVID‐19 in Solid Tissues and Non‐Blood Fluids: An Update	0
Simple, Fast, and Reliable Analysis of Label‐Free Proteomics Data With the Proteomics Eye (ProtE)	0
Proteomics profiling of kidney brush border membrane from rats using LC‐MS/MS analysis	0
Integrated glycomics strategy for galactosylated‐N‐glycans recognized by Bandeiraea Simplicifolia Lectin I in salivary proteins associated with lung cancer	0
Machine Learning‐Driven Discovery of Essential Binding Preference in Anti‐CRISPR Proteins	0
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Causal Effects From Kidney Function to Plasma Proteome: Integrated Observational and Mendelian Randomization Analysis With >50,000 UK Biobank Participants	0
Masthead: Proteomics 4'24	0
Profiling of proteome changes in plasma of HIV‐infected patients receiving antiretroviral therapy	0
Realm of proteomics in breast cancer management and drug repurposing to alleviate intricacies of treatment	0
Minimally Invasive Versus Invasive Proteomics: Urine and Blood Biomarkers in Coronary Artery Disease	0
Front Cover	0
Masthead: Proteomics 1'23	0
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Front Cover	0
Prospecting Specific Protein Patterns for High Body Mass Index (BMI), Metabolic Syndrome and Type 2 Diabetes in Saliva and Blood Plasma From a Brazilian Population	0
Identification of novel biomarkers for frailty diagnosis via serum amino acids metabolomic analysis using UPLC‐MS/MS	0
Integration of the cancer cell secretome and transcriptome reveals potential noninvasive diagnostic markers for bladder cancer	0
Proteomic Analysis of Cervicovaginal Fluid for Diagnostic Endometriosis Biomarker Discovery	0
Intramural Administration of Translational Inhibitor Puromycin Upon Balloon Angioplasty Inhibits SMC Proliferation and Protein Synthesis–Vascular Proteome Profiling Analysis	0
Screening of novel biomarkers for acute kidney transplant rejection using DIA‐MS based proteomics	0
LC‐MS‐based urine metabolomics analysis of chronic subdural hematoma for biomarker discovery	0
Protein Network Alterations in G‐CSF Treated Severe Congenital Neutropenia Patients and Beneficial Effects of Oral Health Intervention	0
Editorial Board: Proteomics 4'22	0
Differential Abundance of Protein Acylation in Mycobacterium tuberculosis Under Exposure to Nitrosative Stress	0
Obituary: In Memory of Michael (Mike) J. Dunn (1946–2024)	0
Comparative Profiling of Milk Somatic Cells Proteomes Revealed Key Players in Mammary Immune Mechanisms During Mastitis in Tropical Sahiwal (Bos indicus) Cows	0
Proteomic Insights Into the Pathogenesis of Intracerebral Hemorrhage: The Role of Blend Sign in Hematoma Expansion	0
Efficacy of Glucocorticoids in the Treatment of Retinal Detachment With Choroidal Detachment: Analysis by Proteomics	0
Artificial Intelligence and the Evolving Landscape of Immunopeptidomics	0
Exosomal proteins as a source of biomarkers in colon cancer‐derived peritoneal carcinomatosis – A pilot study	0
Proteomics of azoospermia: Towards the discovery of reliable markers for non‐invasive diagnosis	0
Cerebrospinal fluid proteins in idiopathic intracranial hypertension: An exploratory SWATH proteomics analysis	0
N‐glycosylation of disease‐specific haptoglobin for the early screening of diabetic retinopathy	0
Masthead: Proteomics 5'24	0
Front Cover	0
Masthead: Proteomics 5'23	0
Exploration of quantitative site‐specific serum O‐glycoproteomics with isobaric labeling for the discovery of putative O‐glycoprotein biomarkers	0
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Proteomic landscape of primary and metastatic brain tumors for heterogeneity discovery	0
Two effective models based on comprehensive lipidomics and metabolomics can distinguish BC versus HCs, and TNBC versus non‐TNBC	0
Discovery and validation of serum glycoprotein biomarkers for high grade serous ovarian cancer	0
Front Cover	0
Integrated plasma proteomics and N‐glycoproteomics reveals alterations in the N‐glycosylation in Chinese hepatocellular carcinoma patients	0
Front Cover	0
Urinary collagen peptides: Source of markers for bone metabolic processes in kidney transplant recipients	0
Masthead: Proteomics 2'24	0
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Issue Information: Proteomics 5'25	0
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Spindle apparatus coiled‐coil protein 1 (SPDL1) serves as a novel prognostic biomarker in triple‐negative breast cancer	0