Mobile DNA

Papers
(The TQCC of Mobile DNA is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-02-01 to 2025-02-01.)
ArticleCitations
The role of Smarcad1 in retroviral repression in mouse embryonic stem cells71
Software evaluation for de novo detection of transposons50
The IS6 family, a clinically important group of insertion sequences including IS2636
SINE jumping contributes to large-scale polymorphisms in the pig genomes35
The structural diversity of CACTA transposons in genomes of Chenopodium (Amaranthaceae, Caryophyllales) species: specific traits and comparison with the similar elements of angiosperms29
Recurrent co-domestication of PIF/Harbinger transposable element proteins in insects23
Subfamily-specific differential contribution of individual monomers and the tether sequence to mouse L1 promoter activity21
Analysis of antibiotic resistance gene cassettes in a newly identified Salmonella enterica serovar Gallinarum strain in Korea21
CAULIFINDER: a pipeline for the automated detection and annotation of caulimovirid endogenous viral elements in plant genomes20
RepEnTools: an automated repeat enrichment analysis package for ChIP-seq data reveals hUHRF1 Tandem-Tudor domain enrichment in young repeats20
Subcellular location of L1 retrotransposon-encoded ORF1p, reverse transcription products, and DNA sensors in lupus granulocytes18
Teleost genomic repeat landscapes in light of diversification rates and ecology17
Whole-genome analysis reveals the contribution of non-coding de novo transposon insertions to autism spectrum disorder16
International congress on transposable elements (ICTE 2024) in Saint Malo: breaking down transposon waves and their impact12
Unbiased proteomic mapping of the LINE-1 promoter using CRISPR Cas910
Themes and variations on piRNA-guided transposon control10
Look4LTRs: a Long terminal repeat retrotransposon detection tool capable of cross species studies and discovering recently nested repeats9
Correction: Transposon-derived introns as an element shaping the structure of eukaryotic genomes9
Identification of transposable element families from pangenome polymorphisms8
Evolutionary dynamics of the LTR-retrotransposon crapaud in the Podospora anserina species complex and the interaction with repeat-induced point mutations8
The coevolution between APOBEC3 and retrotransposons in primates8
Telomeric retrotransposons show propensity to form G-quadruplexes in various eukaryotic species8
Evolution of Einkorn wheat centromeres is driven by the mutualistic interplay of two LTR retrotransposons8
Response from Varani et al. to “Comment on ‘the IS6 family, a clinically important group of insertion sequences including IS26’ by Ruth M. Hall”8
An intronic LINE-1 regulates IFNAR1 expression in human immune cells7
A beginner’s guide to manual curation of transposable elements7
Generalized nuclear localization of retroelement transcripts7
Differential regulation of transposable elements (TEs) during the murine submandibular gland development6
Accelerating de novo SINE annotation in plant and animal genomes6
Internal initiation of reverse transcription in a Penelope-like retrotransposon6
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