Mobile DNA

Papers
(The TQCC of Mobile DNA is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-04-01 to 2025-04-01.)
ArticleCitations
The role of Smarcad1 in retroviral repression in mouse embryonic stem cells76
Software evaluation for de novo detection of transposons52
Marine vs. terrestrial: links between the environment and the diversity of Copia retrotransposon in metazoans41
The structural diversity of CACTA transposons in genomes of Chenopodium (Amaranthaceae, Caryophyllales) species: specific traits and comparison with the similar elements of angiosperms30
SINE jumping contributes to large-scale polymorphisms in the pig genomes24
Subfamily-specific differential contribution of individual monomers and the tether sequence to mouse L1 promoter activity22
Analysis of antibiotic resistance gene cassettes in a newly identified Salmonella enterica serovar Gallinarum strain in Korea20
RepEnTools: an automated repeat enrichment analysis package for ChIP-seq data reveals hUHRF1 Tandem-Tudor domain enrichment in young repeats20
Unbiased proteomic mapping of the LINE-1 promoter using CRISPR Cas917
CAULIFINDER: a pipeline for the automated detection and annotation of caulimovirid endogenous viral elements in plant genomes15
Subcellular location of L1 retrotransposon-encoded ORF1p, reverse transcription products, and DNA sensors in lupus granulocytes15
International congress on transposable elements (ICTE 2024) in Saint Malo: breaking down transposon waves and their impact14
Correction: Transposon-derived introns as an element shaping the structure of eukaryotic genomes12
Whole-genome analysis reveals the contribution of non-coding de novo transposon insertions to autism spectrum disorder11
Themes and variations on piRNA-guided transposon control10
Recurrent co-domestication of PIF/Harbinger transposable element proteins in insects10
Telomeric retrotransposons show propensity to form G-quadruplexes in various eukaryotic species9
Response from Varani et al. to “Comment on ‘the IS6 family, a clinically important group of insertion sequences including IS26’ by Ruth M. Hall”9
The coevolution between APOBEC3 and retrotransposons in primates9
Teleost genomic repeat landscapes in light of diversification rates and ecology9
Targeted detection of endogenous LINE-1 proteins and ORF2p interactions8
A genome-wide study of ruminants uncovers two endogenous retrovirus families recently active in goats8
Generalized nuclear localization of retroelement transcripts8
Correction to: Upregulation of selected HERVW loci in multiple sclerosis8
Subtelomeric repeat expansion in Hydractinia symbiolongicarpus chromosomes8
Transposable elements in genomic architecture of Monilinia fungal phytopathogens and TE-driven DMI-resistance adaptation8
SCIFER: approach for analysis of LINE-1 mRNA expression in single cells at a single locus resolution7
Identification of transposable element families from pangenome polymorphisms6
An intronic LINE-1 regulates IFNAR1 expression in human immune cells6
Differential regulation of transposable elements (TEs) during the murine submandibular gland development6
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