Mobile DNA

Papers
(The TQCC of Mobile DNA is 8. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)
ArticleCitations
The Dfam community resource of transposable element families, sequence models, and genome annotations380
The IS6 family, a clinically important group of insertion sequences including IS2671
Transposable element-derived sequences in vertebrate development51
A beginner’s guide to manual curation of transposable elements50
Unbiased profiling of CRISPR RNA-guided transposition products by long-read sequencing36
Transcriptional activity of transposable elements along an elevational gradient in Arabidopsis arenosa35
Transposable elements as essential elements in the control of gene expression29
RIP-seq reveals LINE-1 ORF1p association with p-body enriched mRNAs23
KRAB zinc finger protein ZNF676 controls the transcriptional influence of LTR12-related endogenous retrovirus sequences21
SINE jumping contributes to large-scale polymorphisms in the pig genomes21
Migrators within migrators: exploring transposable element dynamics in the monarch butterfly, Danaus plexippus20
Whole-genome analysis reveals the contribution of non-coding de novo transposon insertions to autism spectrum disorder20
TE Hub: A community-oriented space for sharing and connecting tools, data, resources, and methods for transposable element annotation18
Intruder (DD38E), a recently evolved sibling family of DD34E/Tc1 transposons in animals17
Software evaluation for de novo detection of transposons17
Genomic properties of variably methylated retrotransposons in mouse16
Transposable element subfamily annotation has a reproducibility problem14
Association analysis of repetitive elements and R-loop formation across species14
The derepression of transposable elements in lung cells is associated with the inflammatory response and gene activation in idiopathic pulmonary fibrosis12
Eco-evolutionary significance of domesticated retroelements in microbial genomes10
Unbiased proteomic mapping of the LINE-1 promoter using CRISPR Cas910
Teleost genomic repeat landscapes in light of diversification rates and ecology9
T3E: a tool for characterising the epigenetic profile of transposable elements using ChIP-seq data9
The unusual structure of the PiggyMac cysteine-rich domain reveals zinc finger diversity in PiggyBac-related transposases8
Differential regulation of transposable elements (TEs) during the murine submandibular gland development8
A 192 bp ERV fragment insertion in the first intron of porcine TLR6 may act as an enhancer associated with the increased expressions of TLR6 and TLR18
Themes and variations on piRNA-guided transposon control8
Upregulation of selected HERVW loci in multiple sclerosis8
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