Mobile DNA

Papers
(The median citation count of Mobile DNA is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)
ArticleCitations
Recurrent co-domestication of PIF/Harbinger transposable element proteins in insects80
Whole-genome analysis reveals the contribution of non-coding de novo transposon insertions to autism spectrum disorder55
Subcellular location of L1 retrotransposon-encoded ORF1p, reverse transcription products, and DNA sensors in lupus granulocytes42
Generalized nuclear localization of retroelement transcripts31
Long-read sequencing improves the genetic diagnosis of retinitis pigmentosa by identifying an Alu retrotransposon insertion in the EYS gene26
SCIFER: approach for analysis of LINE-1 mRNA expression in single cells at a single locus resolution23
Look4LTRs: a Long terminal repeat retrotransposon detection tool capable of cross species studies and discovering recently nested repeats22
An intronic LINE-1 regulates IFNAR1 expression in human immune cells21
SINE-derived satellites in scaled reptiles20
Correction: A beginner’s guide to manual curation of transposable elements18
Multiple horizontal transfer events of a DNA transposon into turtles, fishes, and a frog15
Characterization of transposable elements within the Bemisia tabaci species complex14
Association of a 7.9 kb Endogenous Retrovirus Insertion in Intron 1 of CD36 with Obesity and Fat Measurements in Sheep12
A comparative analysis of L1 retrotransposition activities in human genomes suggests an ongoing increase in L1 number despite an evolutionary trend towards lower activity11
THE1B may have no role in human pregnancy due to ZNF430-mediated silencing11
Plants acquired mitochondrial linear plasmids horizontally from fungi likely during the conquest of land11
Chromosomal integration of Tn5253 occurs downstream of a conserved 11-bp sequence of the rbgA gene in Streptococcus pneumoniae and in all the other known hosts of this integrative conjugative element 10
Analysis of pericentromere composition and structure elucidated the history of the Hieracium alpinum L. genome, revealing waves of transposable elements insertions10
Insertion of short L1 sequences generates inter-strain histone acetylation differences in the mouse10
Pan cancer characterization of genes whose expression has been associated with LINE-1 antisense promoter activity9
Correction: Characterization of transposable elements within the Bemisia tabaci species complex9
Mobile group I introns at nuclear rDNA position L2066 harbor sense and antisense homing endonuclease genes intervened by spliceosomal introns9
Association of hyperactivated transposon expression with exacerbated immune activation in systemic lupus erythematosus9
RNA sensor MDA5 suppresses LINE-1 retrotransposition by regulating the promoter activity of LINE-1 5′-UTR8
Unbiased profiling of CRISPR RNA-guided transposition products by long-read sequencing8
TE Density: a tool to investigate the biology of transposable elements8
Impact of a horizontally transferred Helitron family on genome evolution in Xenopus laevis7
RepEnTools: an automated repeat enrichment analysis package for ChIP-seq data reveals hUHRF1 Tandem-Tudor domain enrichment in young repeats7
Exploration of the regulatory relationship between KRAB-Zfp clusters and their target transposable elements via a gene editing strategy at the cluster specific linker-associated sequences by CRISPR-Ca6
Multiple horizontal transfers of a Helitron transposon associated with a parasitoid wasp6
The fifth Japanese meeting on biological function and evolution through interactions between hosts and transposable elements6
Internal initiation of reverse transcription in a Penelope-like retrotransposon6
FishPi: a bioinformatic prediction tool to link piRNA and transposable elements6
Retand LTR-retrotransposons in plants: a long way from pol to 3’LTR5
Host range of strand-biased circularizing integrative elements: a new class of mobile DNA elements nesting in Gammaproteobacteria5
Comparative genomic and transcriptomic analyses of transposable elements in polychaetous annelids highlight LTR retrotransposon diversity and evolution5
A unique eukaryotic lineage of composite-like DNA transposons encoding a DDD/E transposase and a His-Me finger homing endonuclease5
Analysis of antibiotic resistance gene cassettes in a newly identified Salmonella enterica serovar Gallinarum strain in Korea4
The derepression of transposable elements in lung cells is associated with the inflammatory response and gene activation in idiopathic pulmonary fibrosis4
Identification of transposable element families from pangenome polymorphisms4
Unbiased proteomic mapping of the LINE-1 promoter using CRISPR Cas94
The role of Smarcad1 in retroviral repression in mouse embryonic stem cells4
Migrators within migrators: exploring transposable element dynamics in the monarch butterfly, Danaus plexippus4
Differential regulation of transposable elements (TEs) during the murine submandibular gland development4
A beginner’s guide to manual curation of transposable elements3
Transposable element dynamics in Xenopus laevis embryogenesis: a tale of two coexisting subgenomes3
Upregulation of selected HERVW loci in multiple sclerosis3
The sixth Japanese meeting on biological function and evolution through interactions between hosts and transposable elements3
Eco-evolutionary significance of domesticated retroelements in microbial genomes3
A proteomic screen of Ty1 integrase partners identifies the protein kinase CK2 as a regulator of Ty1 retrotransposition3
A 192 bp ERV fragment insertion in the first intron of porcine TLR6 may act as an enhancer associated with the increased expressions of TLR6 and TLR12
Further varieties of ancient endogenous retrovirus in human DNA2
Subfamily-specific differential contribution of individual monomers and the tether sequence to mouse L1 promoter activity2
REPrise: de novo interspersed repeat detection using inexact seeding2
Co-expression of distinct L1 retrotransposon coiled coils can lead to their entanglement2
IS26 carrying blaKPC−2 mediates carbapenem resistance heterogeneity in extensively drug-resistant Klebsiella pneumoniae isolated from clinical sites2
Population analysis of retrotransposons in giraffe genomes supports RTE decline and widespread LINE1 activity in Giraffidae2
melRNA-seq for Expression Analysis of SINE RNAs and Other Medium-Length Non-Coding RNAs2
Alternative splicing of transposable elements in human breast cancer1
Subtelomeric repeat expansion in Hydractinia symbiolongicarpus chromosomes1
SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses1
Transposon expression and repression in skeletal muscle1
Themes and variations on piRNA-guided transposon control1
Teleost genomic repeat landscapes in light of diversification rates and ecology1
Evolution of Einkorn wheat centromeres is driven by the mutualistic interplay of two LTR retrotransposons1
SINE jumping contributes to large-scale polymorphisms in the pig genomes1
Identification and functional analysis of recent IS transposition events in rhizobia1
Telomeric retrotransposons show propensity to form G-quadruplexes in various eukaryotic species1
The coevolution between APOBEC3 and retrotransposons in primates1
Genomic analysis reveals the role of integrative and conjugative elements in plant pathogenic bacteria1
CRISPR-TE: a web-based tool to generate single guide RNAs targeting transposable elements1
Marine vs. terrestrial: links between the environment and the diversity of Copia retrotransposon in metazoans1
Obituary: Haig Kazazian and Horizontal Transfer (1937 – 2022)1
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