Genome Biology and Evolution

Article	Citations
Discovery of New Genomic Configuration of Mating-Type Loci in the Largest Lineage of Lichen-Forming Fungi	109
Erratum to: Chromosome-Level Assembly of the Atlantic Silverside Genome Reveals Extreme Levels of Sequence Diversity and Structural Genetic Variation	97
Correction to: Genome-Scale Data Reveal Deep Lineage Divergence and a Complex Demographic History in the Texas Horned Lizard (Phrynosoma cornutum) throughout the Southwestern and Central United	88
Myxozoans (Cnidaria) do not Retain Key Oxygen-Sensing and Homeostasis Toolkit Genes	85
Highlight: Gene Cluster Reshuffling Drives Natural Sunscreen Evolution in Lichens	63
Evolution of Plant Conserved microRNAs After Whole-Genome Duplications	53
Palaeognaths Reveal Evolutionary Ancestry of the Avian Major Histocompatibility Complex Class II	52
Whole-Genome Sequences of Two Kazachstania barnettii Strains Isolated from Anthropic Environments	43
“Correcting” Gene Trees to be More Like Species Trees Frequently Increases Topological Error	42
Genome Evolution and Introgression in the New Zealand mud Snails Potamopyrgus estuarinus and Potamopyrgus kaitunuparaoa	40
Ancient Sheep Genomes Reveal Four Millennia of North European Short-Tailed Sheep in the Baltic Sea Region	40
Ohnologs and SSD Paralogs Differ in Genomic and Expression Features Related to Dosage Constraints	39
Conservation of a DNA Replication Motif among Phylogenetically Distant Budding Yeast Species	39
Genomic Resources and Annotations for a Colonial Ascidian, the Light-Bulb Sea Squirt Clavelina lepadiformis	38
Filtration of Gene Trees From 9,000 Exons, Introns, and UCEs Disentangles Conflicting Phylogenomic Relationships in Tree Frogs (Hylidae)	38
Genealogical Analyses of 3 Cultivated and 1 Wild Specimen of Vitis vinifera from Greece	37
Divergence in theSaccharomycesSpecies’ Heat Shock Response Is Indicative of Their Thermal Tolerance	37
Genetic Analysis of Mingrelians Reveals Long-Term Continuity of Populations in Western Georgia (Caucasus)	37
The Nitroplast and Its Relatives Support a Universal Model of Features Predicting Gene Retention in Endosymbiont and Organelle Genomes	36
Diversity of Sex Chromosomes in Vertebrates: Six Novel Sex Chromosomes in Basal Haplochromines (Teleostei: Cichlidae)	32
Does Effective Population Size Govern Evolutionary Differences in Telomere Length?	32
OrthoPhy: A Program to Construct Ortholog Data Sets Using Taxonomic Information	31
Multiple Domestication Centers of the Indian Pig Population	30
Egg Yolk Protein Homologs Identified in Live-Bearing Sharks: Co-Opted in the Lecithotrophy-to-Matrotrophy Shift?	30
Population Genomics of Japanese Macaques (Macaca fuscata): Insights Into Deep Population Divergence and Multiple Merging Histories	30

New Perspectives on the Evolution of Within-Individual Genome Variation and Germline/Soma Distinction	30
Nuclear and Mitochondrial Genome Assemblies for the Endangered Wood-Decaying Fungus Somion occarium	30
Comprehensive Phylogenomics of Methylobacterium Reveals Four Evolutionary Distinct Groups and Underappreciated Phyllosphere Diversity	29
Our Tangled Family Tree: New Genomic Methods Offer Insight into the Legacy of Archaic Admixture	28
Cis-regulatory Variation in Relation to Sex and Sexual Dimorphism in Drosophila melanogaster	28
A Simulation Framework for Modeling the Within-Patient Evolutionary Dynamics of SARS-CoV-2	28
High Polymorphism Levels of De Novo ORFs in a Yoruba Human Population	27
Erratum to: Genomic analyses unveil helmeted guinea fowl (Numida meleagris) domestication in West Africa	27
Editor's Note on: Can a Y chromosome degenerate in an evolutionary instant? A commentary on Fong et al. 2023	27
Genome Dynamics and Temperature Adaptation During Experimental Evolution of Obligate Intracellular Bacteria	27
Exploring the Natural Origins of SARS-CoV-2 in the Light of Recombination	27
Technological Development and Advances for Constructing and Analyzing Plant Pangenomes	27
Corrigendum to: Intraspecific Transcriptome Variation and Sex-Biased Expression in Anopheles Arabiensis	27
The Evolution of Comparative Phylogeography: Putting the Geography (and More) into Comparative Population Genomics	26
HyRAD-X Exome Capture Museomics Unravels Giant Ground Beetle Evolution	26
Evolution of the Growth Hormone Gene Duplication in Passerine Birds	26
Genetic Signatures of Positive Selection in Human Populations Adapted to High Altitude in Papua New Guinea	25
Genetic Drift and Host-Adaptive Features Likely Underlie the Cladogenesis of Insect-Associated Lachnospiraceae	24
Highlight: Epigenetics HelpHydraGet Ahead	24
Parallel Independent Losses of G-Type Lysozyme Genes in Hairless Aquatic Mammals	24
On the Origin and Evolution of Microbial Mercury Methylation	23
A Chromosome-Level Genome Assembly ofToona ciliata(Meliaceae)	23
Highlight: Tardigrades and the Science of Extreme Survival	23
Complete Genome Sequencing of a NovelGloeobacterSpecies from a Waterfall Cave in Mexico	23
Complete Genome Sequence of the Type Strain Tepidimonas taiwanensis LMG 22826T, a Thermophilic Alkaline Protease and Polyhydroxyalkanoate Producer	22
Analysis of Sex Chromosome Evolution in the Clade Palaeognathae from Phased Genome Assembly	22
Chromosome-Level Genome Assembly of the Viviparous Eelpout Zoarces viviparus	22
Population Genetics of Reproductive Genes in Haplodiploid Species	22
It Took Me a While to Figure out What Science I Really Wanted to Do	21
Calling Structural Variants with Confidence from Short-Read Data in Wild Bird Populations	21
Analyses of Transposable Elements in Arbuscular Mycorrhizal Fungi Support Evolutionary Parallels With Filamentous Plant Pathogens	21
Genome-wide Evidence of Host Specialization in Wild and Farmland Populations of the Fungal Leaf Spot Pathogen, Cercospora beticola	21
Erratum to: The Transposable Element Environment of Human Genes Differs According to Their Duplication Status and Essentiality	21
Genomic Insights into Fertilization: Tracing PLCZ1 Orthologs Across Amphibian Lineages	21
Haplotype-Resolved, Chromosome-Level Assembly of White Clover (Trifolium repens L., Fabaceae)	21
Fine-Scale Map Reveals Highly Variable Recombination Rates Associated with Genomic Features in the Eurasian Blackcap	21
T Residues Preceded by Runs of G Are Hotspots of T→G Mutation in Bacteria	21
ORFans in Mitochondrial Genomes of Marine Polychaete Polydora	20
Cellular Reprogramming and Immortality: Expression Profiling Reveals Putative Genes Involved in Turritopsis dohrnii’s Life Cycle Reversal	20
The Structure of Simple Satellite Variation in the Human Genome and Its Correlation With Centromere Ancestry	20
Highlight: The Surprising Endurance of DNA's Smallest Repeats	20
Genomic Adaptations to an Endoparasitic Lifestyle in the Morphologically Atypical CrustaceanSacculina carcini(Cirripedia: Rhizocephala)	20
Global Emergence and Dissemination of Neisseria gonorrhoeae ST-9363 Isolates with Reduced Susceptibility to Azithromycin	20
De Novo Genome Assemblies From Two Indigenous Americans from Arizona Identify New Polymorphisms in Non-Reference Sequences	20
The Evolution and Characterization of the RNA Interference Pathways in Lophotrochozoa	20
A High Frequency of Chromosomal Duplications in Unicellular Algae Is Compensated by Translational Regulation	19
Evolution of an Alternative Genetic Code in the Providencia Symbiont of the Hematophagous Leech Haementeria acuecueyetzin	19
Extensive Recombination-driven Coronavirus Diversification Expands the Pool of Potential Pandemic Pathogens	19
HuConTest: Testing Human Contamination in Great Ape Samples	19
Highlight: Unraveling the Origins of LUCA and LECA on the Tree of Life	19

Convergent Evolution and Predictability of Gene Copy Numbers Associated with Diets in Mammals	19
Genomic Data Reveal Diverse Biological Characteristics of Scleractinian Corals and Promote Effective Coral Reef Conservation	19
Selection on the Fly: Short-Term Adaptation to an Altered Sexual Selection Regime inDrosophila pseudoobscura	19
ZW Sex Chromosome Differentiation in Palaeognathous Birds Is Associated with Mitochondrial Effective Population Size but Not Mitochondrial Genome Size or Mutation Rate	19
Characterization of Single-Cell Cis-regulatory Elements Informs Implications for Cell Differentiation	18
Signatures of Selection on Mitonuclear Integrated Genes Uncover Hidden Mitogenomic Variation in Fur Seals	18
Exploring the Relationship Between Gene Expression and Low-Frequency Somatic Mutations in Arabidopsis with Duplex Sequencing	18
Chromosome-Scale Genomes of the Flightless Caterpillar Hunter Beetles Calosoma tepidum and Calosoma wilkesii From British Columbia (Coleoptera: Carabidae)	18
Convergent Evolution Has Led to the Loss of Claw Proteins in Snakes and Worm Lizards	18
Chromosome-Scale Genome Assembly and Annotation of Allotetraploid Annual Bluegrass (Poa annua L.)	18
Examining the Effects of Hibernation on Germline Mutation Rates in Grizzly Bears	18
Are Geckos Special in Sex Determination? Independently Evolved Differentiated ZZ/ZW Sex Chromosomes in Carphodactylid Geckos	18
Nonsystematic Reporting Biases of the SARS-CoV-2 Variant Mu Could Impact Our Understanding of the Epidemiological Dynamics of Emerging Variants	18
Ubiquity and Origins of Structural Maintenance of Chromosomes (SMC) Proteins in Eukaryotes	17
Comparative Population Genomics of Cryptic Speciation and Adaptive Divergence in Bicknell’s and Gray-Cheeked Thrushes (Aves:Catharus bicknelliandCatharus minimus)	17
Linked-Read Sequencing of Eight Falcons Reveals a Unique Genomic Architecture in Flux	17
Conserved Noncoding Elements Evolve Around the Same Genes Throughout Metazoan Evolution	17
Where Are the Formerly Y-linked Genes in the Ryukyu Spiny Rat that has Lost its Y Chromosome?	17
A Chromosome-Level Genome Assembly and Annotation for the Clouded Apollo Butterfly (Parnassius mnemosyne): A Species of Global Conservation Concern	17
Emilia Huerta-Sanchez	17
Genomic Sequence and Transcriptome Analysis of the Medicinal Fungus Keithomyces neogunnii	17
Challenges in Assembling the Dated Tree of Life	17
Comparative Analysis of Mitochondrial Genomes in Gryllidea (Insecta: Orthoptera): Implications for Adaptive Evolution in Ant-Loving Crickets	17
Unveiling the Virome of Wild Birds: Exploring CRESS-DNA Viral Dark Matter	17
Lessons from Extremophiles: Functional Adaptations and Genomic Innovations across the Eukaryotic Tree of Life	17
High Stability of the Epigenome inDrosophilaInterspecific Hybrids	17
Nanopore Sequencing of Amoebophrya Species Reveals Novel Collection of Bacteria Putatively Associated With Karlodinium veneficum	16
Impact of Heat Stress on Transposable Element Expression and Derived Small RNAs in Drosophila subobscura	16
Extensive Loss and Gain of Conserved Noncoding Elements During Early Teleost Evolution	16
Discovery of Paralogous GnRH and Corazonin Signaling Systems in an Invertebrate Chordate	16
The Birth-and-Death Evolution of Cytochrome P450 Genes in Bees	16
Arthropod Phylotranscriptomics With a Special Focus on the Basal Phylogeny of the Myriapoda	15
Cytogenetic Analysis of the Fish Genus Carassius Indicates Divergence, Fission, and Segmental Duplication as Drivers of Tandem Repeat and Microchromosome Evolution	15
The “Bipartite” Structure of the First Genome of Ampelomyces quisqualis, a Common Hyperparasite and Biocontrol Agent of Powdery Mildews, May Point to Its Evolutionary Origin from Plant Pathogen	15
Size Matters: Genome Size Dynamics Driven by Copy Number Variation in a Green Alga	15
The Impact of Sample Size and Population History on Observed Mutational Spectra: A Case Study in Human and Chimpanzee Populations	15
Paralogous Gene Recruitment in Multiple Families Constitutes Genetic Architecture and Robustness of Pod Dehiscence in Legumes	15
Selection and Gene Duplication Associated With High-Elevation Diversification in Pristimantis, the Largest Terrestrial Vertebrate Genus	15
A Chromosome-Level Genome Assembly of Ephestia elutella (Hübner, 1796) (Lepidoptera: Pyralidae)	15
Hunting for Beneficial Mutations: Conditioning on SIFT Scores When Estimating the Distribution of Fitness Effect of New Mutations	15
Evolution of Transient Receptor Potential (TRP) Ion Channels in Antarctic Fishes (Cryonotothenioidea) and Identification of Putative Thermosensors	15
The Evolutionary Origins of Extreme Halophilic Archaeal Lineages	15
Low Mutation Rate and Atypical Mutation Spectrum in Prasinoderma coloniale: Insights From an Early Diverging Green Lineage	14
Can a Y Chromosome Degenerate in an Evolutionary Instant? A Commentary on Fong et al. 2023	14
Mutational Signatures of Replication Timing and Epigenetic Modification Persist through the Global Divergence of Mutation Spectra across the Great Ape Phylogeny	14
Adaptive Potential of Epigenetic Switching During Adaptation to Fluctuating Environments	14
Genome-Scale Analysis Reveals Extensive Diversification of Voltage-Gated K+ Channels in Stem Cnidarians	14
Accurate Detection of Convergent Mutations in Large Protein Alignments With ConDor	14
Genomic Signatures of a Major Adaptive Event in the Pathogenic Fungus Melampsora larici-populina	14
Inferring the Selective History of CNVs Using a Maximum Likelihood Model	14
Diverse Gene Regulatory Mechanisms Alter Rattlesnake Venom Gene Expression at Fine Evolutionary Scales	14
Correction to: Editorial 2024	14
Highlight: Microbial Manipulators of Insect Sexual Reproduction	14
Small but Mitey: A Gapless Telomere-to-Telomere Assembly of an Unidentified Mite With a Streamlined Genome	14
Evolutionary Genomics of Sister Species Differing in Effective Population Sizes and Recombination Rates	14
PromethION Sequencing and Assembly of the Genome of Micropoecilia picta, a Fish with a Highly Degenerated Y Chromosome	14
Novel High-Quality Amoeba Genomes Reveal Widespread Codon Usage Mismatch Between Giant Viruses and Their Hosts	14
Genetic Diversity in Chimpanzee Transcriptomics Does Not Represent Wild Populations	13
Opportunistic Bacteria of Grapevine Crown Galls Are Equipped with the Genomic Repertoire for Opine Utilization	13
Genetic Variation in Jamaican Populations of the Coffee Berry Borer, Hypothenemus hampei	13
Emerging SARS-CoV-2 Diversity Revealed by Rapid Whole-Genome Sequence Typing	13
Genome-Scale Data Reveal Deep Lineage Divergence and a Complex Demographic History in the Texas Horned Lizard (Phrynosoma cornutum) throughout the Southwestern and Central United States	13
Chromosome-Scale Assembly of Capsella orientalis, Maternal Progenitor of Cosmopolitan Allotetraploid C. bursa-pastoris	13
Comparative Population Genomics of Arctic Sled Dogs Reveals a Deep and Complex History	13
LukProt: A Database of Eukaryotic Predicted Proteins Designed for Investigations of Animal Origins	13
Sequencing Bait: Nuclear and Mitogenome Assembly of an Abundant Coastal Tropical and Subtropical Fish,Atherinomorus stipes	13
Conserved Genes in Highly Regenerative Metazoans Are Associated with Planarian Regeneration	13
Examining the Effects of Temperature on the Evolution of Bacterial tRNA Pools	13
Mitochondrial Variation in Anopheles gambiae and Anopheles coluzzii: Phylogeographic Legacy and Mitonuclear Associations With Metabolic Resistance to Pathogens and Insecticides	13
Experimental Evaluation of a Direct Fitness Effect of the De Novo Evolved Mouse Gene Pldi	13
Infections by Transovarially Transmitted DMelSV in Drosophila Have No Impact on Ovarian Transposable Element Transcripts but Increase Their Amounts in the Soma	13
Ancient Loss of Catalytic Selenocysteine Spurred Convergent Adaptation in a Mammalian Oxidoreductase	12
A Genome for Edith’s Checkerspot Butterfly: An Insect with Complex Host-Adaptive Suites and Rapid Evolutionary Responses to Environmental Changes	12
Plethora of New Marsupial Genomes Informs Our Knowledge of Marsupial MHC Class II	12
Making a Pathogen? Evaluating the Impact of Protist Predation on the Evolution of Virulence in Serratia marcescens	12
The Effect of the Presence and Absence of DNA Repair Genes on the Rate and Pattern of Mutation in Bacteria	12
The Effect of Methodological Considerations on the Construction of Gene-Based Plant Pan-genomes	12
Populations, Traits, and Their Spatial Structure in Humans	12
Gene Duplication, Shifting Selection, and Dosage Balance of Silicon Transporter Proteins in Marine and Freshwater Diatoms	12
The Legacy of Infectious Disease Exposure on the Genomic Diversity of Indigenous Southern Mexicans	12

Potential Role of DNA Methylation as a Driver of Plastic Responses to the Environment Across Cells, Organisms, and Populations	12
Examination of Gene Loss in the DNA Mismatch Repair Pathway and Its Mutational Consequences in a Fungal Phylum	12
THI1 Gene Evolutionary Trends: A Comprehensive Plant-Focused Assessment via Data Mining and Large-Scale Analysis	11
Mitogenomics and mitochondrial gene phylogeny decipher the evolution ofSaccharomycotinayeasts	11
Assessing the Presence of Recent Adaptation in the Human Genome With Mixture Density Regression	11
Epigenetic and Genetic Population Structure is Coupled in a Marine Invertebrate	11
The First Annotated Genome Assembly of Macrophomina tecta Associated with Charcoal Rot of Sorghum	11
Insertion–Deletion Events Are Depleted in Protein Regions with Predicted Secondary Structure	11
C. Brandon Ogbunu(gafor)	11
De Novo Genome Assembly and Annotation for the Synanthropic Webbing Clothes Moth (Tineola bisselliella): A Globally Distributed, Economically Important Pest	11
Whole-Genome Duplications and the Diversification of the Globin-X Genes of Vertebrates	11
Modeling Substitution Rate Evolution across Lineages and Relaxing the Molecular Clock	11
History of Diversification and Adaptation from North to South Revealed by Genomic Data: Guanacos from the Desert to Sub-Antarctica	11
Chromosome-Level Genome Assemblies of Two Hypnales (Mosses) Reveal High Intergeneric Synteny	11
High-Resolution Estimates of Crossover and Noncrossover Recombination from a Captive Baboon Colony	11
Clustering of Sex-Biased Genes and Transposable Elements in the Genome of the Medaka FishOryzias latipes	11
Hawaiian Nysius Insects Rely on an Obligate Symbiont with a Reduced Genome That Retains a Discrete Nutritional Profile to Match Their Plant Seed Diet	11
Chromosome Structural Rearrangements in Invasive Haplodiploid Ambrosia Beetles Revealed by the Genomes of Euwallacea fornicatus (Eichhoff) and Euwallacea similis (Ferrari) (Coleoptera, C	11
Tracing Homopolymers in Oikopleura dioica's Mitogenome	11
Aminoacyl-tRNA Synthetase Evolution within the Dynamic Tripartite Translation System of Plant Cells	11
Duplications and Retrogenes Are Numerous and Widespread in Modern Canine Genomic Assemblies	11
Chromosome-Level Genome Assembly of the Green Peafowl (Pavo muticus)	11
Epigenetic and Genetic Differentiation Between Coregonus Species Pairs	11
Phylotranscriptomic Analyses of Mycoheterotrophic Monocots Show a Continuum of Convergent Evolutionary Changes in Expressed Nuclear Genes From Three Independent Nonphotosynthetic Lineages	11
Campylobacter fetus Plasmid Diversity: Comparative Analysis of Fully Sequenced Plasmids and Proposed Classification Scheme	11
Alternative Modes of Introgression-Mediated Selection Shaped Crop Adaptation to Novel Climates	11
Chromosome-Level Assembly and Annotation of the Genome of the Endangered Giant Patagonian Bumble Bee Bombus dahlbomii	11
Flatworm Transcriptomes Reveal Widespread Parasitism by Histophagous Ciliates	11
Genome Assembly of the Nematode Rhabditoides Inermis From a Complex Microbial Community	11
Tracing the Evolution of Human Gene Regulation and Its Association with Shifts in Environment	11
Draft Genome of Akame (Lates Japonicus) Reveals Possible Genetic Mechanisms for Long-Term Persistence and Adaptive Evolution with Low Genetic Diversity	11
Evolution of Metabolome and Transcriptome Supports a Hierarchical Organization of Adaptive Traits	11
Phylogenomic Analyses of 2,786 Genes in 158 Lineages Support a Root of the Eukaryotic Tree of Life between Opisthokonts and All Other Lineages	10
The Genome of Plasmodium gonderi: Insights into the Evolution of Human Malaria Parasites	10
Contrasting Modes of Mitochondrial Genome Evolution in Sister Taxa of Wood-Eating Marine Bivalves (Teredinidae and Xylophagaidae)	10
Contrasting Genomic Evolution Between Domesticated and WildKluyveromyces lactisYeast Populations	10
Inside the Shark Nursery: The Evolution of Live Birth in Cartilaginous Fish	10
Habitat-associated Genomic Variation in a Wall Lizard from an Oceanic Island	10
The Site/Group Extended Data Format and Tools	10
TIdeS: A Comprehensive Framework for Accurate Open Reading Frame Identification and Classification in Eukaryotic Transcriptomes	10
Chromosome-Scale Genome Assembly of the Solitary Parasitoid Wasp Microplitis manilae Ashmead, 1904 (Braconidae: Microgastrinae)	10
Telomere-to-telomere Genome Assembly of the Clubroot Pathogen Plasmodiophora Brassicae	10
Nucleotide Usage Biases Distort Inferences of the Species Tree	10
Horizontal Transfer of Microbial Toxin Genes to Gall Midge Genomes	10
Chromosomal-Level Genome Assembly of the SpringtailTomocerus qinae(Collembola: Tomoceridae)	10
Monodopsis and Vischeria Genomes Shed New Light on the Biology of Eustigmatophyte Algae	10
The Linkage-Disequilibrium and Recombinational Landscape in Daphnia pulex	10
Selection Shapes the Genomic Landscape of Introgressed Ancestry in a Pair of Sympatric Sea Urchin Species	10
Highlight: Reconciling Differences between Germline and Soma	10
Rapid Adaptation Often Occurs through Mutations to the Most Highly Conserved Positions of the RNA Polymerase Core Enzyme	10
Comparing Small and Large Genomes Within Monogonont Rotifers	10
The Presence of Ancient Core Genes Reveals Endogenization from Diverse Viral Ancestors in Parasitoid Wasps	10
Editor’s Note: A Naturally Heteroplasmic Clam Provides Clues about the Effects of Genetic Bottleneck on Paternal mtDNA	10
How Sequence Context-Dependent Mutability Drives Mutation Rate Variation in the Genome	10
Phylogeny and Expansion of Serine/Threonine Kinases in Phagocytotic Bacteria in the Phylum Planctomycetota	10
Functional Compensation of Mouse Duplicates by their Paralogs Expressed in the Same Tissues	10
Re-examining Correlations Between Synonymous Codon Usage and Protein Bond Angles in Escherichia coli	10
Segregating Complete Tf2 Elements Are Largely Neutral in Fission Yeast	10
A Machine Learning Framework Identifies Plastid-Encoded Proteins Harboring C3 and C4 Distinguishing Sequence Information	9
Comprehensive Transcriptome Sequencing of Tanaidacea with Proteomic Evidences for Their Silk	9
A Short-Term View of Protein Sequence Evolution from Salmonella	9
Chromosome-Level Genome Assembly of the Asian Tramp Snail Bradybaena similaris (Stylommatophora: Camaenidae)	9
BLAST from the Past: Impacts of Evolving Approaches on Studies of Evolution by Gene Duplication	9
Pervasive Mitochondrial tRNA Gene Loss in Clade B of Haplosclerid Sponges (Porifera, Demospongiae)	9
Inferring the Demographic History of Aye-Ayes (Daubentonia madagascariensis) from High-Quality, Whole-Genome, Population-Level Data	9
Rel/NF-κB Transcription Factors Emerged at the Onset of Opisthokonts	9
Brain Gene Expression of Foraging Behavior and Social Environment inCeratina calcarata	9
Dollo Parsimony Overestimates Ancestral Gene Content Reconstructions	9
Fine Mapping without Phenotyping: Identification of Selection Targets in Secondary Evolve and Resequence Experiments	9
scRNA-seq Reveals Novel Genetic Pathways and Sex Chromosome Regulation in Tribolium Spermatogenesis	9
Chromosome-Level Genome Assembly and Annotation of Corallium rubrum: A Mediterranean Coral Threatened by Overharvesting and Climate Change	9
The Mutational Road not Taken: Using Ancestral Sequence Resurrection to Evaluate the Evolution of Plant Enzyme Substrate Preferences	9
Molecular Basis of Eusocial Complexity: The Case of Worker Reproductivity in Bees	9
Chromosome-Level Genome Assembly of the Australian Rainforest Tree Rhodamnia argentea (Malletwood)	9
Gene Loss may have Shaped the Cnidarian and Bilaterian Hox and ParaHox Complement	9
Pseudomonas putida Dynamics of Adaptation under Prolonged Resource Exhaustion	9
Reduced Efficacy of Selection on a Young Z Chromosome Region of Schistosoma japonicum	9
Replication-Dependent Organization Constrains Positioning of Long DNA Repeats in Bacterial Genomes	9
No Evidence that Selection on Synonymous Codon Usage Affects Patterns of Protein Evolution in Bacteria	8
Highlight: From Prey to Pathogen—The Role of Predation in Driving Virulence	8
Base Composition, Codon Usage, and Patterns of Gene Sequence Evolution in Butterflies	8
Phylogenomics of Opsin Genes in Diptera Reveals Lineage-Specific Events and Contrasting Evolutionary Dynamics in Anopheles and Drosophila	8
Gene Duplications Are At Least 50 Times Less Frequent than Gene Transfers in Prokaryotic Genomes	8
Genetic origins of the Kiritimati population from central-eastern Micronesia	8
Differentially Expressed Genes Associated with Body Size Changes and Transposable Element Insertions between Caenorhabditis elegans and Its Sister Species, Caenorhabditis inopinata	8
Chromosome-Scale Genome Assembly of the Resurrection Plant Acanthochlamys bracteata (Velloziaceae)	8
Chromosome-level Genome Assembly and Annotation of the Arctic Moss Ptychostomum knowltonii	8
MATEdb2, a Collection of High-Quality Metazoan Proteomes across the Animal Tree of Life to Speed Up Phylogenomic Studies	8
Characterizing Amino Acid Substitution with Complete Linkage of Sites on a Lineage	8
Correction to: The Genome of Plasmodium gonderi: Insights into the Evolution of Human Malaria Parasites	8
Six Newly Sequenced Chloroplast Genomes From Quadriflagellate Chlamydomonadales (Chlorophyceae): Phylogeny and Comparative Genome Analyses	8
Genomic Comparisons Reveal Selection Pressure and Functional Variation Between Nutritional Endosymbionts of Cave-Adapted and Epigean Hawaiian Planthoppers	8
Natural Transposable Element Insertions Contribute to Host Fitness in Model Yeasts	8
A Chromosome-Level Genome Assembly of the Pygmy Mole CricketXya riparia	8
Expanding on Our Knowledge of Ecdysozoan Genomes: A Contiguous Assembly of the Meiofaunal Priapulan Tubiluchus corallicola	8