Microbial Biotechnology

Article	Citations
RT‐LAMP for rapid diagnosis of coronavirus SARS‐CoV‐2	395
Thermophilic whole‐cell degradation of polyethylene terephthalate using engineered Clostridium thermocellum	101
Co‐occurrence of antibiotic, biocide, and heavy metal resistance genes in bacteria from metal and radionuclide contaminated soils at the Savannah River Site	88
Different lactic acid bacteria and their combinations regulated the fermentation process of ensiled alfalfa: ensiling characteristics, dynamics of bacterial community and their functional shifts	81
The bacterial community and metabolome dynamics and their interactions modulate fermentation process of whole crop corn silage prepared with or without inoculants	74
Honey bee (Apis mellifera) gut microbiota promotes host endogenous detoxification capability via regulation of P450 gene expression in the digestive tract	68
Clinical evidence that the pandemic from 1889 to 1891 commonly called the Russian flu might have been an earlier coronavirus pandemic	66
Synthetic community with six Pseudomonas strains screened from garlic rhizosphere microbiome promotes plant growth	63
Microbial biosurfactant research: time to improve the rigour in the reporting of synthesis, functional characterization and process development	62
Rhamnolipids produced by Pseudomonas: from molecular genetics to the market	61
Realities and hopes in the application of microbial tools in agriculture	60
Antibiofilm and antifungal activities of medium‐chain fatty acids against Candida albicans via mimicking of the quorum‐sensing molecule farnesol	57
Water‐soluble polymers in agriculture: xanthan gum as eco‐friendly alternative to synthetics	52
Pediococcus pentosaceus LI05 alleviates DSS‐induced colitis by modulating immunological profiles, the gut microbiota and short‐chain fatty acid levels in a mouse model	52
The soil crisis: the need to treat as a global health problem and the pivotal role of microbes in prophylaxis and therapy	50
Nothing lasts forever: understanding microbial biodegradation of polyfluorinated compounds and perfluorinated alkyl substances	48
Fermentation of plant‐based dairy alternatives by lactic acid bacteria	46
Effects of growth‐promoting rhizobacteria on maize growth and rhizosphere microbial community under conservation tillage in Northeast China	46
Phage biocontrol to combat Pseudomonas syringae pathogens causing disease in cherry	45
Efficient genome editing in filamentous fungi via an improved CRISPR‐Cas9 ribonucleoprotein method facilitated by chemical reagents	45
Modulation of gut mucosal microbiota as a mechanism of probiotics‐based adjunctive therapy for ulcerative colitis	45
Characteristics and nutrient function of intestinal bacterial communities in black soldier fly (Hermetia illucens L.) larvae in livestock manure conversion	43
Pseudomonas putida KT2440 is naturally endowed to withstand industrial‐scale stress conditions	42
COVID‐19: Omicron – the latest, the least virulent, but probably not the last variant of concern of SARS‐CoV‐2	40
Lipoteichoic acid from Bifidobacterium animalis subsp. lactis BPL1: a novel postbiotic that reduces fat deposition via IGF‐1 pathway	39

Multi‐modular engineering of Saccharomyces cerevisiae for high‐titre production of tyrosol and salidroside	39
Catching a glimpse of the bacterial gut community of companion animals: a canine and feline perspective	38
Can a combination of vaccination and face mask wearing contain the COVID‐19 pandemic?	37
Evaluation of the IR Biotyper for Klebsiella pneumoniae typing and its potentials in hospital hygiene management	36
The endolysin of the Acinetobacter baumannii phage vB_AbaP_D2 shows broad antibacterial activity	36
Genome analysis of the metabolically versatile Pseudomonas umsongensis GO16: the genetic basis for PET monomer upcycling into polyhydroxyalkanoates	36
The novel insecticides flupyradifurone and sulfoxaflor do not act synergistically with viral pathogens in reducing honey bee (Apis mellifera) survival but sulfoxaflor modulates host immunocompe	35
Repurposing phytochemicals as anti‐virulent agents to attenuate quorum sensing‐regulated virulence factors and biofilm formation in Pseudomonas aeruginosa	35
Harnessing microbial volatiles to replace pesticides and fertilizers	35
Microbial enzymes will offer limited solutions to the global plastic pollution crisis	34
Secondary metabolites from plant‐associated Pseudomonas are overproduced in biofilm	34
Exogenous maltose enhances Zebrafish immunity to levofloxacin‐resistant Vibrio alginolyticus	34
Probiotic Lactobacillus casei Shirota prevents acute liver injury by reshaping the gut microbiota to alleviate excessive inflammation and metabolic disorders	33
Loop‐mediated isothermal amplification for the detection of SARS‐CoV‐2 in saliva	32
Inhibition of polymicrobial biofilm formation by saw palmetto oil, lauric acid and myristic acid	32
Glycine significantly enhances bacterial membrane vesicle production: a powerful approach for isolation of LPS‐reduced membrane vesicles of probiotic Escherichia coli	31
High‐efficiency production of bisabolene from waste cooking oil by metabolically engineered Yarrowia lipolytica	31
Holistic assessment of the microbiome dynamics in the substrates used for commercial champignon (Agaricus bisporus) cultivation	31
Biocorrosion caused by microbial biofilms is ubiquitous around us	30
Cepharanthine ameliorates dextran sulphate sodium‐induced colitis through modulating gut microbiota	30
Development of a free radical scavenging bacterial consortium to mitigate oxidative stress in cnidarians	30
Prophage encoding toxin/antitoxin system PfiT/PfiA inhibits Pf4 production in Pseudomonas aeruginosa	30
An updated overview on the regulatory circuits of polyhydroxyalkanoates synthesis	30
Scientific novelty beyond the experiment	29
Enhancing astaxanthin accumulation in Xanthophyllomyces dendrorhous by a phytohormone: metabolomic and gene expression profiles	29
COVID 19: challenges for virologists in the food industry	29
Gut microbiota composition before infection determines the Salmonella super‐ and low‐shedder phenotypes in chicken	28
Microbial interaction with and tolerance of radionuclides: underlying mechanisms and biotechnological applications	27
Correlation of extracellular polymeric substances and microbial community structure in denitrification biofilm exposed to adverse conditions	27
Geographic pattern of antibiotic resistance genes in the metagenomes of the giant panda	27
The differences and overlaps in the seed‐resident microbiome of four Leguminous and three Gramineous forages	27
Electron availability in CO2, CO and H2 mixtures constrains flux distribution, energy management and product formation in Clostridium ljungdahlii	27
Endophytes isolated from Panax notoginseng converted ginsenosides	26
Lactic acid bacteria as probiotics for the nose?	26
Microfluidic devices for studying bacterial taxis, drug testing and biofilm formation	26
The seaweed holobiont: from microecology to biotechnological applications	26
Butyrate production in the acetogen Eubacterium limosum is dependent on the carbon and energy source	26
Stochasticity in microbiology: managing unpredictability to reach the Sustainable Development Goals	26
SEVA 3.1: enabling interoperability of DNA assembly among the SEVA, BioBricks and Type IIS restriction enzyme standards	26
Visualizing the invisible: class excursions to ignite children’s enthusiasm for microbes	25
Biomolecular composition of capping layer and stability of biogenic selenium nanoparticles synthesized by five bacterial species	25
Isolation of alkaliphilic calcifying bacteria and their feasibility for enhanced CaCO3 precipitation in bio‐based cementitious composites	25
Truth in wine yeast	25
Resveratrol affects in vitro rumen fermentation, methane production and prokaryotic community composition in a time‐ and diet‐specific manner	25
Plant growth‐promoting rhizobacteria isolation from rhizosphere of submerged macrophytes and their growth‐promoting effect on Vallisneria natans under high sediment organic matter load	24
Membrane disruption of Fusarium oxysporum f. sp. niveum induced by myriocin from Bacillus amyloliquefaciens LZN01	24
Proteomic characterization of extracellular vesicles produced by several wine yeast species	24
Environment and host species identity shape gut microbiota diversity in sympatric herbivorous mammals	24
Enhanced bioproduction of anticancer precursor vindoline by yeast cell factories	24
Characteristic gut microbiota and metabolic changes in patients with pulmonary tuberculosis	24

Engineering microbial technologies for environmental sustainability: choices to make	24
Bacterial metabolosomes: new insights into their structure and bioengineering	24
Addressing the energy crisis: using microbes to make biofuels	23
Elevated intracellular cyclic‐di‐GMP level in Shewanella oneidensis increases expression of c‐type cytochromes	23
Characterization of JEN family carboxylate transporters from the acid‐tolerant yeast Pichia kudriavzevii and their applications in succinic acid production	23
Shifts in the rhizobiome during consecutive in planta enrichment for phosphate‐solubilizing bacteria differentially affect maize P status	23
Unrevealed roles of polyphosphate‐accumulating microorganisms	22
Faecal microbiota transplantation‐mediated jejunal microbiota changes halt high‐fat diet‐induced obesity in mice via retarding intestinal fat absorption	22
Washed preparation of faecal microbiota changes the transplantation related safety, quantitative method and delivery	22
The end of hunger: fertilizers, microbes and plant productivity	22
Antimicrobial resistance: progress and challenges in antibiotic discovery and anti‐infective therapy	22
Metabolic engineering of Escherichia coli for biosynthesis of β‐nicotinamide mononucleotide from nicotinamide	22
Legume–rhizobium dance: an agricultural tool that could be improved?	22
Caecal microbiota could effectively increase chicken growth performance by regulating fat metabolism	22
Bacillus subtilis and Enterococcus faecium co‐fermented feed regulates lactating sow's performance, immune status and gut microbiota	22
Minicell‐based fungal RNAi delivery for sustainable crop protection	22
Detection of buried explosives with immobilized bacterial bioreporters	22
Synergistic effect of hypocrellin B and curcumin on photodynamic inactivation of Staphylococcus aureus	22
Metabolic engineering strategies of de novo pathway for enhancing 2′‐fucosyllactose synthesis in Escherichia coli	21
Sulfane sulfur‐activated actinorhodin production and sporulation is maintained by a natural gene circuit in Streptomyces coelicolor	21
Monitoring COVID‐19 through SARS‐CoV‐2 quantification in wastewater: progress, challenges and prospects	21
High‐throughput molecular analyses of microbiomes as a tool to monitor the wellbeing of aquatic environments	21
Biotransformation of d‐xylose to d‐xylonate coupled to medium‐chain‐length polyhydroxyalkanoate production in cellobiose‐grown Pseudomonas putida EM42	21
Structural analysis and biochemical properties of laccase enzymes from two Pediococcus species	21
Soil microbiota influences clubroot disease by modulating Plasmodiophora brassicae and Brassica napus transcriptomes	21
Dictyostelium discoideum as a non‐mammalian biomedical model	21
Biochemical analysis of cross‐feeding behaviour between two common gut commensals when cultivated on plant‐derived arabinogalactan	20
Protective effect of Lactobacillus salivarius Li01 on thioacetamide‐induced acute liver injury and hyperammonaemia	20
Integrating continuous hypermutation with high‐throughput screening for optimization of cis,cis‐muconic acid production in yeast	20
Flexible integrated sensing platform for monitoring wound temperature and predicting infection	20
Revealing formate production from carbon monoxide in wild type and mutants of Rnf‐ and Ech‐containing acetogens, Acetobacterium woodii and Thermoanaerobacter kivui	20
Microbial food: microorganisms repurposed for our food	20
Assessing the potential for up‐cycling recovered resources from anaerobic digestion through microbial protein production	20
Development and application of an efficient recombineering system for Burkholderia glumae and Burkholderia plantarii	20
Enhancing fluxes through the mevalonate pathway in Saccharomyces cerevisiae by engineering the HMGR and β‐alanine metabolism	19
Convergent phenotypic evolution towards fosfomycin collateral sensitivity of Pseudomonas aeruginosa antibiotic‐resistant mutants	19
An eDNA/eRNA‐based approach to investigate the life cycle of non‐cultivable shellfish micro‐parasites: the case of Bonamia ostreae, a parasite of the European flat oyster Ostrea edulis	19
Revisiting the host adhesion determinants of Streptococcus thermophilus siphophages	19
Strain diversity of plant‐associated Lactiplantibacillus plantarum	19
Identification of genome integration sites for developing a CRISPR‐based gene expression toolkit in Yarrowia lipolytica	18
Repositioning microbial biotechnology against COVID‐19: the case of microbial production of flavonoids	18
Yarrowia lipolyticachassis strains engineered to produce aromatic amino acids via the shikimate pathway	18
Mining for novel antibiotics in the age of antimicrobial resistance	18
Characteristics of gut microbiota in pigs with different breeds, growth periods and genders	18
Water is a preservative of microbes	18
Current approaches on the roles of lactic acid bacteria in crop silage	17
Screening of a genome‐reduced Corynebacterium glutamicum strain library for improved heterologous cutinase secretion	17
Natural sciences at the service of art and cultural heritage: an interdisciplinary area in development and important challenges	17
COVID‐19: emergence and mutational diversification of SARS‐CoV‐2	17
Association between algal productivity and phycosphere composition in an outdoor Chlorella sorokiniana reactor based on multiple longitudinal analyses	17
Interdependence between lignocellulosic biomasses, enzymatic hydrolysis and yeast cell factories in biorefineries	17
Toxoplasma gondii α‐amylase deletion mutant is a promising vaccine against acute and chronic toxoplasmosis	17
Airborne bacterial emission fluxes from manure‐fertilized agricultural soil	17
Fish growth enhances microbial sulfur cycling in aquaculture pond sediments	17
What we can learn from the dynamics of the 1889 ‘Russian flu’ pandemic for the future trajectory of COVID‐19	17
Metabolic engineering of Saccharomyces cerevisiae for hydroxytyrosol overproduction directly from glucose	17
Effect of concentration and hydraulic reaction time on the removal of pharmaceutical compounds in a membrane bioreactor inoculated with activated sludge	17
Engineering controllable biofilms for biotechnological applications	17
Metabolic engineering of Vibrio natriegens for anaerobic succinate production	16
Plasma‐mediated enhancement of enzyme secretion in Aspergillus oryzae	16
Defining how microorganisms benefit human health	16
We and herbivores eat endophytes	16
Benchmarking recombinant Pichiapastoris for 3‐hydroxypropionic acid production from glycerol	16
Safety of photosynthetic Synechococcus elongatus for in vivo cyanobacteria–mammalian symbiotic therapeutics	16
Extracellular vesicle formation in Lactococcus lactis is stimulated by prophage‐encoded holin–lysin system	16
Phytoplankton trigger the production of cryptic metabolites in the marine actinobacterium Salinispora tropica	16
Enzyme‐constrained models predict the dynamics of Saccharomyces cerevisiae growth in continuous, batch and fed‐batch bioreactors	16
Status quo of tet regulation in bacteria	16
The potential of bacteriophages to control Xanthomonas campestris pv. campestris at different stages of disease development	15
Protein‐based natural antibacterial materials and their applications in food preservation	15
Biosynthesis of cofactor‐activatable iron‐only nitrogenase in Saccharomyces cerevisiae	15
Role of phenazine‐enzyme physiology for current generation in a bioelectrochemical system	15
An underappreciated DIET for anaerobic petroleum hydrocarbon‐degrading microbial communities	15
COVID‐19: vaccine’s progress	15
Safety and immunogenicity of a new glycoengineered vaccine against Acinetobacter baumannii in mice	15
Antifungal activity of hypocrellin compounds and their synergistic effects with antimicrobial agents against Candida albicans	15
Living electronics: A catalogue of engineered living electronic components	15
First description of betalains biosynthesis in an aquatic organism: characterization of 4,5‐DOPA‐extradiol‐dioxygenase activity in the cyanobacteria Anabaena cylindrica	15
SEVAtile: a standardised DNA assembly method optimised for Pseudomonas	15
The role of the Listeria monocytogenes surfactome in biofilm formation	15

Rapid preparation and antimicrobial activity of polyurea coatings with RE‐Doped nano‐ZnO	14
Different co‐occurring bacteria enhance or decrease the growth of the microalga Nannochloropsis sp. CCAP211/78	14
Genomic insights on fighting bacterial wilt by a novel Bacillus amyloliquefaciens strain Cas02	14
Alterations in the gut microbiome and metabolic profile in rats acclimated to high environmental temperature	14
The urgent need for microbiology literacy in society: children as educators	14
Bacteriophage‐mediated interference of the c‐di‐GMP signalling pathway in Pseudomonas aeruginosa	14
Comparative secretome of white‐rot fungi reveals co‐regulated carbohydrate‐active enzymes associated with selective ligninolysis of ramie stalks	14
Carbon catabolite regulation of secondary metabolite formation, an old but not well‐established regulatory system	14
On the future fermentation	14
Sanguinarine synergistically potentiates aminoglycoside‐mediated bacterial killing	14
Comprehensively dissecting the hub regulation of PkaC on high‐productivity and pellet macromorphology in citric acid producing Aspergillus niger	14
Newly identified genes contribute to vanillin tolerance in Saccharomyces cerevisiae	14
High‐throughput dilution‐based growth method enables time‐resolved exo‐metabolomics of Pseudomonas putida and Pseudomonas aeruginosa	13
A newly developed PCR‐based method revealed distinct Fusobacterium nucleatum subspecies infection patterns in colorectal cancer	13
Synthetic co‐culture of autotrophic Clostridium carboxidivorans and chain elongating Clostridium kluyveri monitored by flow cytometry	13
Sustainable biosynthesis of chemicals from methane and glycerol via reconstruction of multi‐carbon utilizing pathway in obligate methanotrophic bacteria	13
Structure–activity relationships of antibacterial peptides	13
Enhancement of microbiome management by machine learning for biological wastewater treatment	13
Use of CRISPR‐Cas tools to engineer Trichoderma species	13
Extremophilic microbial communities on photovoltaic panel surfaces: a two‐year study	13
Oil field microorganisms cause highly localized corrosion on chemically inhibited carbon steel	13
Metabolic engineering of Pseudomonas putida for increased polyhydroxyalkanoate production from lignin	13
The Brassica napus seed microbiota is cultivar‐specific and transmitted via paternal breeding lines	13
Genome mining of a fungal endophyte of Taxus yunnanensis (Chinese yew) leads to the discovery of a novel azaphilone polyketide, lijiquinone	13
Efficient CRISPR/Cas9 system based on autonomously replicating plasmid with an AMA1 sequence and precisely targeted gene deletion in the edible fungus, Cordyceps militaris	13
The gut microbiota, a key to understanding the health implications of micro(nano)plastics and their biodegradation	13
Sporulation is dispensable for the vegetable‐associated life cycle of the human pathogen Bacillus cereus	13
Armeniaspirol A: a novel anti‐Helicobacter pylori agent	13
Auxin‐mediated induction of GAL promoters by conditional degradation of Mig1p improves sesquiterpene production in Saccharomyces cerevisiae with engineered acetyl‐CoA synthesis	13
Engineering a probiotic strain of Escherichia coli to induce the regression of colorectal cancer through production of 5‐aminolevulinic acid	13
Integrating greenhouse gas capture and C1 biotechnology: a key challenge for circular economy	13
One major facilitator superfamily transporter is responsible for propionic acid tolerance in Pseudomonas putida KT2440	12
Additive effects of metal excess and superoxide, a highly toxic mixture in bacteria	12
Physiological activity of E. coli engineered to produce butyric acid	12
Transcriptome dynamics and metabolite analysis revealed the candidate genes and regulatory mechanism of ganoderic acid biosynthesis during liquid superficial‐static culture of Ganoderma lucidum	12
Metabolic engineering of Pseudomonas putida for production of vanillylamine from lignin‐derived substrates	12
In vivo, in vitro and in silico: an open space for the development of microbe‐based applications of synthetic biology	12
Engineering Saccharomyces cerevisiae‐based biosensors for copper detection	12
MiMiC: a bioinformatic approach for generation of synthetic communities from metagenomes	12
Continuous feeding strategy for polyhydroxyalkanoate production from solid waste animal fat at laboratory‐ and pilot‐scale	12
Diallyl sulfide from garlic suppresses quorum‐sensing systems of Pseudomonas aeruginosa and enhances biosynthesis of three B vitamins through its thioether group	12
Programming living sensors for environment, health and biomanufacturing	12
Establishment of a Cuscuta campestris‐mediated enrichment system for genomic and transcriptomic analyses of ‘Candidatus Liberibacter asiaticus’	12
Developing an understanding of sophorolipid synthesis through application of a central composite design model	12
Network analysis and functional estimation of the microbiome reveal the effects of cashew nut shell liquid feeding on methanogen behaviour in the rumen	12
High methanol‐to‐formate ratios induce butanol production in Eubacterium limosum	12
Weaponising microbes for peace	12
Metabolic energy conservation for fermentative product formation	12
Next steps after 15 stimulating years of human gut microbiome research	12
Multi‐level metabolic engineering of Escherichia coli for high‐titer biosynthesis of 2′‐fucosyllactose and 3‐fucosyllactose	11
Microbial production of small peptide: pathway engineering and synthetic biology	11
The rising dominance of microbiology: what to expect in the next 15 years?	11
The membrane mucin Msb2 regulates aflatoxin biosynthesis and pathogenicity in fungus Aspergillus flavus	11
Electroacupuncture modulates the intestinal microecology to improve intestinal motility in spinal cord injury rats	11
The development of human gut microbiota fermentation capacity during the first year of life	11
The beginning and ending of a respiratory viral pandemic‐lessons from the Spanish flu	11
Green and scalable synthesis of chiral aromatic alcohols through an efficient biocatalytic system	11
Mechanistic and phylogenetic insights into actinobacteria‐mediated oestrogen biodegradation in urban estuarine sediments	11
Accessing previously uncultured marine microbial resources by a combination of alternative cultivation methods	11
Production of 11α‐hydroxysteroids from sterols in a single fermentation step by Mycolicibacterium smegmatis	11
When microbial biotechnology meets material engineering	11
Antibiofilm and repair activity of ozonated oil in liposome	11
Improved production of 2,3‐butanediol and isobutanol by engineering electron transport chain in Escherichia coli	11
Biological and technical challenges for implementation of yeast‐based biosensors	11
Nutrient conditions determine the localization of Bacillus thuringiensis Vip3Aa protein in the mother cell compartment	11
Hyperproduction of PHA copolymers containing high fractions of 4‐hydroxybutyrate (4HB) by outer membrane‐defected Halomonas bluephagenesis grown in bioreactors	10
Enhancing electrical outputs of the fuel cells with Geobacter sulferreducens by overexpressing nanowire proteins	10
Rapid production of l‐DOPA by Vibrio natriegens, an emerging next‐generation whole‐cell catalysis chassis	10
Diverse responses of pqqC‐ and phoD‐harbouring bacterial communities to variation in soil properties of Moso bamboo forests	10
A multiplex antigen microarray for simultaneous IgG and IgM detection against SARS‐CoV‐2 reveals higher seroprevalence than reported	10
Revisiting a ‘simple’ fungal metabolic pathway reveals redundancy, complexity and diversity	10
Development of a live biotherapeutic throat spray with lactobacilli targeting respiratory viral infections	10
Lignocellulose conversion of ensiled Caragana korshinskii Kom. facilitated by Pediococcus acidilactici and cellulases	10
Selective fungal bioprecipitation of cobalt and nickel for multiple‐product metal recovery	10
Modes‐of‐action of antifungal compounds: Stressors and (target‐site‐specific) toxins, toxicants, or toxin–stressors	10
A plasmid toolset for CRISPR‐mediated genome editing and CRISPRi gene regulation in Escherichia coli	10
Effect on the ensilage performance and microbial community of adding Neolamarckia cadamba leaves to corn stalks	10
The darkest microbiome—a post‐human biosphere	10
Potential of laser‐induced fluorescence‐light detection and ranging for future stand‐off virus surveillance	10
Increasing the copper sensitivity of microorganisms by restricting iron supply, a strategy for bio‐management practices	10
Hermetia illucens L. larvae–associated intestinal microbes reduce the transmission risk of zoonotic pathogens in pig manure	10
Development of dual‐inducible duet‐expression vectors for tunable gene expression control and CRISPR interference‐based gene repression in Pseudomonas putida KT2440	10
Cecal microbial transplantation attenuates hyperthyroid‐induced thermogenesis in Mongolian gerbils	10
Anthropogenic chemicals and their impacts on microbes living in buildings	10
Are synthetic biology standards applicable in everyday research practice?	10