Epigenomics

Papers
(The TQCC of Epigenomics is 7. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-04-01 to 2024-04-01.)
ArticleCitations
Exosomal microRNAs: novel players in cervical cancer64
Analysis of exosomal lncRNA, miRNA and mRNA expression profiles and ceRNA network construction in endometriosis42
CircRNA hsa_circ_0004771 promotes esophageal squamous cell cancer progression via miR-339-5p/CDC25A axis42
Antagomir technology in the treatment of different types of cancer41
EZH2 inhibition: a promising strategy to prevent cancer immune editing35
An immune epigenetic insight to COVID-19 infection31
Potential use of noncoding RNAs and innovative therapeutic strategies to target the 5’UTR of SARS-CoV-231
hsa_circ_0001947 suppresses acute myeloid leukemia progression via targeting hsa-miR-329-5p/CREBRF axis28
RNA N-6-methyladenosine enzymes and resistance of cancer cells to chemotherapy and radiotherapy28
Per- and polyfluoroalkyl substances, epigenetic age and DNA methylation: a cross-sectional study of firefighters23
Epigenetic biomarkers for human sepsis and septic shock: insights from immunosuppression22
Dynamic analysis of m6A methylation spectroscopy during progression and reversal of hepatic fibrosis22
Epigenetic aging as a biomarker of dementia and related outcomes: a systematic review21
Expression study of candidate miRNAs and evaluation of their potential use as biomarkers of diabetic neuropathy20
Prediction of transcription factors binding events based on epigenetic modifications in different human cells20
LncRNA AC245100.4 binds HSP90 to promote the proliferation of prostate cancer20
Alteration of N6-methyladenosine epitranscriptome profile in unilateral ureteral obstructive nephropathy20
The influence of lifestyle factors on miRNA expression and signal pathways: a review20
Bioinformatics analysis integrating metabolomics of m6A RNA microarray in intervertebral disc degeneration19
LncRNA HCG18 suppresses CD8+ T cells to confer resistance to cetuximab in colorectal cancer via miR-20b-5p/PD-L1 axis19
A transdisciplinary approach to understand the epigenetic basis of race/ethnicity health disparities19
Long noncoding RNAs expression profile and long noncoding RNA-mediated competing endogenous RNA network in nonobstructive azoospermia patients19
Intergenerational effects of maternal post-traumatic stress disorder on offspring epigenetic patterns and cortisol levels18
High-throughput miRNA sequencing of the human placenta: expression throughout gestation18
DNMT1: catalytic and non-catalytic roles in different biological processes18
Eight-gene prognostic signature associated with hypoxia and ferroptosis for gastric cancer with general applicability18
A role for microRNAs in the epigenetic control of sexually dimorphic gene expression in the human placenta17
Epigenetic regulation of adipogenesis by histone-modifying enzymes17
H19 promotes the gastric carcinogenesis by sponging miR-29a-3p: evidence from lncRNA–miRNA–mRNA network analysis17
Construction of a lncRNA–miRNA–mRNA network to determine the key regulators of the Th1/Th2 imbalance in multiple sclerosis17
RNA-Seq profiling of circular RNAs in human small cell lung cancer17
miRNA-148b and its role in various cancers16
DNA methylation analysis of candidate genes associated with dementia in peripheral blood16
Prefrontal cortex eQTLs/mQTLs enriched in genetic variants associated with alcohol use disorder and other diseases16
Epigenetics and expression of key genes associated with cardiac fibrosis:NLRP3, MMP2, MMP9, CCN2/CTGFandAGT16
LncRNA HORAS5 promotes taxane resistance in castration-resistant prostate cancer via a BCL2A1-dependent mechanism16
Social epigenomics: are we at an impasse?15
Unleash multifunctional role of long noncoding RNAs biomarker panel in breast cancer: a predictor classification model15
Epigenetic modulation of autophagy genes linked to diabetic nephropathy by administration of isorhamnetin in Type 2 diabetes mellitus rats15
CpG-methylation-based risk score predicts progression in colorectal cancer15
Transcriptome hallmarks in Helicobacter pylori infection influence gastric cancer and MALT lymphoma15
The growing landscape of succinylation links metabolism and heart disease15
Evaluation of six methylation markers derived from genome-wide screens for detection of cervical precancer and cancer15
Epigenetic mechanisms activated by childhood adversity14
Circular RNA expression profile and m6A modification analysis in poorly differentiated adenocarcinoma of the stomach14
miR-498 inhibits autophagy and M2-like polarization of tumor-associated macrophages in esophageal cancer via MDM2/ATF314
Epigenetics of neuromuscular disorders14
A novel mechanism of intervertebral disc degeneration: imbalance between autophagy and apoptosis14
Hypermethylated promoters of genes UNC5D and KCNA1 as potential novel diagnostic biomarkers in colorectal cancer14
Epigenomics in COVID-19; the link between DNA methylation, histone modifications and SARS-CoV-2 infection14
Identification of tRNA-derived fragments and their potential roles in diabetic cataract rats13
Transcriptome-wide N6-methyladenosine methylation landscape of coronary artery disease13
A combination of methylation and protein markers is capable of detecting gastric cancer detection by combined markers13
Microbial regulation of a lincRNA–miRNA–mRNA network in the mouse hippocampus13
DNA methylation events in transcription factors and gene expression changes in colon cancer13
Early-life stress induces genome-wide sex-dependent miRNA expression and correlation across limbic brain areas in rats13
Melatonin and regulation of miRNAs: novel targeted therapy for cancerous and noncancerous disease13
Early pregnancy dyslipidemia is associated with placental DNA methylation at loci relevant for cardiometabolic diseases12
CLDN10 associated with immune infiltration is a novel prognostic biomarker for clear cell renal cell carcinoma12
Identification of prognostic biomarkers of hepatocellular carcinoma via long noncoding RNA expression and copy number alterations12
Radiologically isolated syndrome: targeting miRNAs as prognostic biomarkers12
Sex-specific DNA methylation differences in people exposed to polybrominated biphenyl12
DNA methylation at the DMPK gene locus is associated with cognitive functions in myotonic dystrophy type 112
HAR1: an insight into lncRNA genetic evolution12
Transcriptomic and epigenomics atlas of myotubes reveals insight into the circadian control of metabolism and development12
CRISPR-mediated modification of DNA methylation pattern in the new era of cancer therapy12
Differentially expressed urinary exo-miRs and clinical outcomes in kidney recipients on short-term tacrolimus therapy: a pilot study12
Detecting differentially methylated regions with multiple distinct associations12
Induced pluripotent stem cell technology: trends in molecular biology, from genetics to epigenetics12
Circular RNA profile in diabetic peripheral neuropathy: analysis of coexpression networks of circular RNAs and mRNAs12
Altered PTPRD DNA methylation associates with restricted adipogenesis in healthy first-degree relatives of Type 2 diabetes subjects12
The multiple faces of NANOG in cancer: a therapeutic target to chemosensitize therapy-resistant cancers12
Dynamics of the cell-free DNA methylome of metastatic prostate cancer during androgen-targeting treatment12
ARID1 proteins: from transcriptional and post-translational regulation to carcinogenesis and potential therapeutics12
Comprehensive analysis of epigenetic modifications and immune-cell infiltration in tissues from patients with systemic lupus erythematosus12
An integrative analysis identifying transcriptional features and key genes involved in COVID-1911
The unfavorable clinical outcome of COVID-19 in smokers is mediated by H3K4me3, H3K9me3 and H3K27me3 histone marks11
Association of HERV-K and LINE-1 hypomethylation with reduced disease-free survival in melanoma patients11
Dysregulation of schizophrenia-associated genes and genome-wide hypomethylation in neurons overexpressing DNMT111
Effects of microRNAs and long non-coding RNAs on chemotherapy response in glioma11
The relationship between epigenetics and microbiota in neuropsychiatric diseases11
Characterization of epigenetic and transcriptional landscape in infantile hemangiomas with ATAC-seq and RNA-seq11
Novel insights toward human stroke-related epigenetics: circular RNA and its impact in poststroke processes10
Sex- and tissue-specific effects of binge-level prenatal alcohol consumption on DNA methylation at birth10
Targeting SARS-CoV-2 using polycomb inhibitors as antiviral agents10
H3K9 methyltransferase EHMT2/G9a controls ERVK-driven noncanonical imprinted genes10
MiR-421 promotes lipid metabolism by targeting PTEN via activating PI3K/AKT/mTOR pathway in non-small cell lung cancer10
Epigenetic regulation of immune checkpoints and T cell exhaustion markers in tumor-infiltrating T cells of colorectal cancer patients10
Polymorphisms of genes required for methionine synthesis and DNA methylation influence mitochondrial DNA methylation10
DNA methylation in chronic obstructive pulmonary disease10
Impact of depression and stress on placental DNA methylation in ethnically diverse pregnant women10
Development and validation of an oxidative phosphorylation-related gene signature in lung adenocarcinoma10
Alteration of the m6A methylation landscape in a mouse model of scleroderma10
Ubiquitination and SUMOylation: protein homeostasis control over cancer10
Expression profiles and functional analysis of plasma tRNA-derived small RNAs in children with fulminant myocarditis10
Aging-induced changes in sperm DNA methylation are modified by low dose of perinatal flame retardants10
Changes ofBDNFexon IV DNA methylation are associated with methamphetamine dependence10
Multi-omics analysis to identify driving factors in colorectal cancer10
LncRNA Gas5 regulates Fn1 deposition via Creb5 in renal fibrosis10
Social determinants of late-life depression epigenetics10
Genome-wide associations between alcohol consumption and blood DNA methylation: evidence from twin study9
Statin therapy is associated with epigenetic modifications in individuals with Type 2 diabetes9
Hsa_circ_0001021 regulates intestinal epithelial barrier function via sponging miR-224-5p in ulcerative colitis9
Roles of noncoding RNAs in the initiation and progression of myocardial ischemia–reperfusion injury9
Epigenomic programming in early fetal brain development9
Comparison of methylation episignatures in KMT2B- and KMT2D-related human disorders9
The DNA methylation landscape of PD-1 (PDCD1) and adjacent lncRNA AC131097.3 in head and neck squamous cell carcinoma9
A preliminary analysis of LncRNA biomarkers for schizophrenia9
Circular RNA expression profiling and bioinformatic analysis of cumulus cells in endometriosis infertility patients9
Epi-drugs as triple-negative breast cancer treatment9
Single-cell epigenomics in cancer: charting a course to clinical impact9
External validation of integrated genetic-epigenetic biomarkers for predicting incident coronary heart disease9
Analysis and annotation of DNA methylation in two nonhuman primate species using the Infinium Human Methylation 450K and EPIC BeadChips9
Differential expression of DNA methyltransferases and demethylases among the various testicular germ cell tumor subtypes9
Knockdown of long noncoding RNA AC245100.4 inhibits the tumorigenesis of prostate cancer cells via the STAT3/NR4A3 axis8
Epigenetic-mediated N-methyl-D-aspartate receptor changes in the brain of isolated reared rats8
Maternal anxiety and depression in pregnancy and DNA methylation of the NR3C1 glucocorticoid receptor gene8
Influence of degree of DNA degradation in formalin-fixed and paraffin-embedded tissue samples on accuracy of genome-wide DNA methylation analysis8
NEAT1 functions as a key mediator of BMP2 to promote osteogenic differentiation of renal interstitial fibroblasts8
Methylation of immune-regulatory cytokine genes and pancreatic cancer outcomes8
Fusaric acid-induced epigenetic modulation of hepatic H3K9me3 triggers apoptosis in vitro and in vivo8
Identification of antisense lncRNAs targeting GSK3β as a regulator in major depressive disorder8
NOL6 promotes the proliferation and migration of endometrial cancer cells by regulating TWIST1 expression8
Racial and ethnic representation in epigenomic studies of preterm birth: a systematic review8
Implication of regulatory networks of long noncoding RNA/circular RNA-miRNA-mRNA in diabetic cardiovascular diseases8
Comprehensive epigenetic analysis of m6A modification in the hippocampal injury of diabetic rats8
miRNA changes in the mouse placenta due to bisphenol A exposure8
The placenta epigenome–brain axis: placental epigenomic and transcriptomic responses that preprogram cognitive impairment8
DNA methylation changes and inflammaging in aging-associated diseases8
Methylation of TMEM176A, a key ERK signaling regulator, is a novel synthetic lethality marker of ATM inhibitors in human lung cancer8
Altered expression of miR-142, miR-155, miR-499a and of their putative common target MDM2 in systemic lupus erythematosus8
Neonatal necrotizing enterocolitis-associated DNA methylation signatures in the colon are evident in stool samples of affected individuals7
Epigenome-wide association scan identifies methylation sites associated with HIV infection7
Hypoxia-associated alternative splicing signature in lung adenocarcinoma7
RETRACTED: [Inhibition of CTCF-regulated miRNA-185-5p mitigates renal interstitial fibrosis of chronic kidney disease]7
Comprehensive analysis of differentially expressed long noncoding RNAs, miRNAs and mRNAs in breast cancer brain metastasis7
Osteoblast-derived lipocalin-2 regulated by miRNA-96-5p/Foxo1 advances the progression of Alzheimer’s disease7
The role of H3K9 acetylation and gene expression in different brain regions of Alzheimer’s disease patients7
Epigenomic effects of vitamin D in colorectal cancer7
Leukocyte methylomic imprints of exposure to the genocide against the Tutsi in Rwanda: a pilot epigenome-wide analysis7
LINC01133 hampers the development of gastric cancer through increasing somatostatin via binding to microRNA-576-5p7
Epigenetic targeting of Waldenström macroglobulinemia cells with BET inhibitors synergizes with BCL2 or histone deacetylase inhibition7
DNA methylation markers for endometrial cancer detection in minimally invasive samples: a systematic review7
DNA methylation episignatures: insight into copy number variation7
miRNA 146b-5p protects against atherosclerosis by inhibiting vascular smooth muscle cell proliferation and migration7
Dysregulated expression of miRNAs in immune thrombocytopenia7
Methylation of N6-adenosine (m6A) modification in miRNAs and its implications in immunity7
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