Algorithms for Molecular Biology

Papers
(The H4-Index of Algorithms for Molecular Biology is 8. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-11-01 to 2025-11-01.)
ArticleCitations
Unifying duplication episode clustering and gene-species mapping inference39
Mem-based pangenome indexing for k-mer queries24
Fast, parallel, and cache-friendly suffix array construction19
Efficient gene orthology inference via large-scale rearrangements16
Binning long reads in metagenomics datasets using composition and coverage information11
Embedding gene trees into phylogenetic networks by conflict resolution algorithms9
On the complexity of non-binary tree reconciliation with endosymbiotic gene transfer9
Constructing phylogenetic networks via cherry picking and machine learning9
AlfaPang: alignment free algorithm for pangenome graph construction8
Swiftly identifying strongly unique k-mers8
Correction: Heuristic shortest hyperpaths in cell signaling hypergraphs8
Quartets enable statistically consistent estimation of cell lineage trees under an unbiased error and missingness model8
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