Algorithms for Molecular Biology

Papers
(The H4-Index of Algorithms for Molecular Biology is 10. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)
ArticleCitations
Natural family-free genomic distance28
Unifying duplication episode clustering and gene-species mapping inference20
Mem-based pangenome indexing for k-mer queries16
Efficient gene orthology inference via large-scale rearrangements14
Fast, parallel, and cache-friendly suffix array construction12
A novel method for inference of acyclic chemical compounds with bounded branch-height based on artificial neural networks and integer programming12
Bayesian optimization with evolutionary and structure-based regularization for directed protein evolution11
On the complexity of non-binary tree reconciliation with endosymbiotic gene transfer10
Constructing phylogenetic networks via cherry picking and machine learning10
Binning long reads in metagenomics datasets using composition and coverage information10
Embedding gene trees into phylogenetic networks by conflict resolution algorithms10
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