OOIR: Observatory of International Research

Papers

(The H4-Index of Molecular Systems Biology is 34. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-02-01 to 2025-02-01.)

Article	Citations
SLAM‐Drop‐seq reveals mRNA kinetic rates throughout the cell cycle	315
Ultra‐high sensitivity mass spectrometry quantifies single‐cell proteome changes upon perturbation	204
Sequence analysis of tyrosine recombinases allows annotation of mobile genetic elements in prokaryotic genomes	179
ENDORSE: a prognostic model for endocrine therapy in estrogen‐receptor‐positive breast cancers	132
Dengue virus preferentially uses human and mosquito non-optimal codons	105
Stress‐sensitive dynamics of miRNAs and Elba1 in Drosophila embryogenesis	95
The population context is a driver of the heterogeneous response of epithelial cells to interferons	90
Linking patient-specific basal MET phosphorylation levels to liver health	75
Quantifying the phenotypic information in mRNA abundance	72
µPhos: a scalable and sensitive platform for high-dimensional phosphoproteomics	71
Uncovering the dynamics and consequences of RNA isoform changes during neuronal differentiation	71
An integrative epigenome-based strategy for unbiased functional profiling of clinical kinase inhibitors	69
Engineering a genome‐reduced bacterium to eliminate Staphylococcus aureus biofilms in vivo	67
A genome‐scale TF–DNA interaction network of transcriptional regulation ofArabidopsisprimary and specialized metabolism	67
Development and validation of AI/ML derived splice-switching oligonucleotides	61
Exploring the microbial savanna: predator-prey interactions in the soil	61
A new way of looking at transcription factor assays	59
Analysis of proteome adaptation reveals a key role of the bacterial envelope in starvation survival	53
A human kinase yeast array for the identification of kinases modulating phosphorylation‐dependent protein–protein interactions	52
The circadian oscillator analysed at the single‐transcript level	51
Systematic identification of 20S proteasome substrates	48
Metabolic balance in colorectal cancer is maintained by optimal Wnt signaling levels	46
Multi‐modal meta‐analysis of cancer cell line omics profiles identifies ECHDC1 as a novel breast tumor suppressor	46
Cell‐to‐cell and type‐to‐type heterogeneity of signaling networks: insights from the crowd	46
High diversity in Delta variant across countries revealed by genome‐wide analysis of SARS‐CoV‐2 beyond the Spike protein	45

TNF stimulation primarily modulates transcriptional burst size of NF‐κB‐regulated genes	44
Differentiation‐related epigenomic changes define clinically distinct keratinocyte cancer subclasses	44
A ubiquitous GC content signature underlies multimodal mRNA regulation by DDX3X	44
Hotspot propensity across mutational processes	41
A highly multiplexed quantitative phosphosite assay for biology and preclinical studies	38
Vesalius: high‐resolution in silico anatomization of spatial transcriptomic data using image analysis	37
Quantitative contributions of TNF receptor superfamily members to CD8 ⁺ T‐cell responses	36
Evolution of genome fragility enables microbial division of labor	35
Dynamic human liver proteome atlas reveals functional insights into disease pathways	34