BMC Biology

Papers
(The median citation count of BMC Biology is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)
ArticleCitations
Assessing the role of Piscine orthoreovirus in disease and the associated risk for wild Pacific salmon154
Personalised modelling of clinical heterogeneity between medium-chain acyl-CoA dehydrogenase patients126
Changing turn-over rates regulate abundance of tryptophan, GS biosynthesis, IAA transport and photosynthesis proteins in Arabidopsis growth defense transitions80
Integration of large and diverse angiosperm DNA fragments into Asian Gnetum mitogenomes71
Regulatory and evolutionary impact of DNA methylation in two songbird species and their naturally occurring F1 hybrids66
Functional characterization of the second feedback loop in the circadian clock of the Antarctic krill Euphausia superba65
Flexible and stretchable polymer optical fibers for chronic brain and vagus nerve optogenetic stimulations in free-behaving animals64
Telomerase subunit Est2 marks internal sites that are prone to accumulate DNA damage61
A whole-body atlas of BMP signaling activity in an adult sea anemone58
CTCF-mediated insulation and chromatin environment modulate Car5b escape from X inactivation56
Author Correction: Satellitome comparison of two oedipodine grasshoppers highlights the contingent nature of satellite DNA evolution55
Cdk5-mediated JIP1 phosphorylation regulates axonal outgrowth through Notch1 inhibition54
Experimental demonstration of tethered gene drive systems for confined population modification or suppression54
Investigating the characteristics of genes and variants associated with self-reported hearing difficulty in older adults in the UK Biobank54
Fossil-calibrated molecular clock data enable reconstruction of steps leading to differentiated multicellularity and anisogamy in the Volvocine algae53
Polycomb contraction differentially regulates terminal human hematopoietic differentiation programs52
Wolbachia incompatible insect technique program optimization over large spatial scales using a process-based model of mosquito metapopulation dynamics51
Cuticular competing endogenous RNAs regulate insecticide penetration and resistance in a major agricultural pest51
Multidimensional associations between nutrient intake and healthy ageing in humans51
Histone modifications and DNA methylation act cooperatively in regulating symbiosis genes in the sea anemone Aiptasia48
Back to the roots, desiccation and radiation resistances are ancestral characters in bdelloid rotifers46
An economical and highly adaptable optogenetics system for individual and population-level manipulation of Caenorhabditis elegans46
Increased interaction between endoplasmic reticulum and mitochondria following sleep deprivation44
A muscle exercise research revolution powered by -omics at single cell and nucleus resolution41
The gut symbiont Sphingomonas mediates imidacloprid resistance in the important agricultural insect pest Aphis gossypii Glover41
Evolutionary dynamics of mitochondrial genomes and intracellular transfers among diploid and allopolyploid cotton species41
The Sapria himalayana genome provides new insights into the lifestyle of endoparasitic plants40
Hibernation reduces GABA signaling in the brainstem to enhance motor activity of breathing at cool temperatures40
Incomplete lineage sorting and introgression among genera and species of Liliaceae tribe Tulipeae: insights from phylogenomics39
Reconstructing the ancestral gene pool to uncover the origins and genetic links of Hmong–Mien speakers39
The dorsoanterior brain of adult amphioxus shares similarities in expression profile and neuronal composition with the vertebrate telencephalon38
Population transcriptogenomics highlights impaired metabolism and small population sizes in tree frogs living in the Chernobyl Exclusion Zone37
A systematic review of the development and application of home cage monitoring in laboratory mice and rats37
Single-cell transcriptomic dynamics of scallop heart reveals the heterogeneous response to heat stress36
Insights into the formation and diversification of a novel chiropteran wing membrane from embryonic development36
Mutant C. elegans mitofusin leads to selective removal of mtDNA heteroplasmic deletions across generations to maintain fitness36
Chromosome-level genome assemblies of four wild peach species provide insights into genome evolution and genetic basis of stress resistance36
Histone acetyltransferase NAA40 modulates acetyl-CoA levels and lipid synthesis36
Reference genomes of channel catfish and blue catfish reveal multiple pericentric chromosome inversions35
An expanded odorant-binding protein mediates host cue detection in the parasitic wasp Baryscapus dioryctriae basis of the chromosome-level genome assembly analysis35
Selection on the promoter regions plays an important role in complex traits during duck domestication35
Chromosome-level assemblies from diverse clades reveal limited structural and gene content variation in the genome of Candida glabrata35
Atomic force microscopy reveals involvement of the cell envelope in biomechanical properties of sickle erythrocytes34
Viral predation pressure on coral reefs33
Plasmodium yoelii iron transporter PyDMT1 interacts with host ferritin and is required in full activity for malarial pathogenesis33
Synthetic Micrographs of Bacteria (SyMBac) allows accurate segmentation of bacterial cells using deep neural networks33
Regenerating zebrafish scales express a subset of evolutionary conserved genes involved in human skeletal disease33
ERF49 mediates brassinosteroid regulation of heat stress tolerance in Arabidopsis thaliana33
Osteosarcoma tumors maintain intra-tumoral transcriptional heterogeneity during bone and lung colonization32
GnRH-driven FTO-mediated RNA m6A modification promotes gonadotropin synthesis and secretion32
Next steps after airing disagreement on a scientific issue with policy implications: a meta-analysis, multi-lab replication and adversarial collaboration31
The mrp-3 gene is involved in haem efflux and detoxification in a blood-feeding nematode31
PACmn for improved optogenetic control of intracellular cAMP31
Proton export upregulates aerobic glycolysis30
Differentially expressed chaperone genes reveal a stress response required for unidirectional regeneration in the basal chordate Ciona30
Sexually dimorphic methylation patterns characterize the placenta and blood from extremely preterm newborns30
Dopamine modulates the retinal clock through melanopsin-dependent regulation of cholinergic waves during development30
Rapid and high-throughput screening of proteolysis targeting chimeras using a dual-reporter system expressing fluorescence protein and luciferase29
CCHCR1-astrin interaction promotes centriole duplication through recruitment of CEP7229
Activation function 1 of progesterone receptor is required for progesterone antagonism of oestrogen action in the uterus29
Author Correction to: Mixotrophic chemosynthesis in a deep-sea anemone from hydrothermal vents in the Pescadero Basin, Gulf of California29
Temperature-dependent dynamics of energy stores in Drosophila29
Publisher Correction to: Palaeoecological differences underlie rare co-occurrence of Miocene European primates29
Temporal dynamics of apoptosis-induced proliferation in pupal wing development: implications for regenerative ability28
Genomic insights into biased allele loss and increased gene numbers after genome duplication in autotetraploid Cyclocarya paliurus28
Imprinted Grb10, encoding growth factor receptor bound protein 10, regulates fetal growth independently of the insulin-like growth factor type 1 receptor (Igf1r) and insulin receptor (Insr) genes28
Articulating the “stem cell niche” paradigm through the lens of non-model aquatic invertebrates28
Astrocytes in CA1 modulate schema establishment in the hippocampal-cortical neuron network28
The genome and sex-dependent responses to temperature in the common yellow butterfly, Eurema hecabe28
Rapid and sensitive single-cell RNA sequencing with SHERRY227
Camelot: a computer-automated micro-extensometer with low-cost optical tracking27
Construction and characterization of a genome-scale ordered mutant collection of Bacteroides thetaiotaomicron27
Expression divergence of expansin genes drive the heteroblasty in Ceratopteris chingii27
The temporal association of CapZ with early endosomes regulates endosomal trafficking and viral entry into host cells27
The broad use of the Pm8 resistance gene in wheat resulted in hypermutation of the AvrPm8 gene in the powdery mildew pathogen26
Accurate RNA velocity estimation based on multibatch network reveals complex lineage in batch scRNA-seq data26
A small protein coded within the mitochondrial canonical gene nd4 regulates mitochondrial bioenergetics26
A unified evolutionary origin for the ubiquitous protein transporters SecY and YidC26
How much do we know about the function of mammalian genes?26
A human iPSC-derived inducible neuronal model of Niemann-Pick disease, type C126
Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs26
Deep time extinction of largest insular ant predators and the first fossil Neoponera (Formicidae: Ponerinae) from Miocene age Dominican amber26
Rare but specific: 5-bp composite motifs define SMAD binding in BMP signaling25
Hybridisation has shaped a recent radiation of grass-feeding aphids25
An ensemble deep learning framework for multi-class LncRNA subcellular localization with innovative encoding strategy25
Author Correction: Hidden genomic features of an invasive malaria vector, Anopheles stephensi, revealed by a chromosome-level genome assembly25
Meta-analysis reveals the vaginal microbiome is a better predictor of earlier than later preterm birth25
An integrated in silico-in vitro approach for identifying therapeutic targets against osteoarthritis25
Long non-coding RNA Tug1 modulates mitochondrial and myogenic responses to exercise in skeletal muscle25
Global patterns of genomic and phenotypic variation in the invasive harlequin ladybird25
Haplotype-resolved genomes of two buckwheat crops provide insights into their contrasted rutin concentrations and reproductive systems25
Widespread 3′UTR capped RNAs derive from G-rich regions in proximity to AGO2 binding sites25
Single-cell RNA-seq analysis of rat molars reveals cell identity and driver genes associated with dental mesenchymal cell differentiation25
Gene flow and an anomaly zone complicate phylogenomic inference in a rapidly radiated avian family (Prunellidae)25
The epigenetic regulator G9a attenuates stress-induced resistance and metabolic transcriptional programs across different stressors and species25
The genome and comparative transcriptome of the euryhaline model ciliate Paramecium duboscqui reveal adaptations to environmental salinity25
Molecular and morphological analysis of the developing nemertean brain indicates convergent evolution of complex brains in Spiralia25
Egg-laying by female Aedes aegypti shapes the bacterial communities of breeding sites25
Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria25
Lineage tracing shows that cell size asymmetries predict the dorsoventral axis in the sea star embryo25
DNA methylation haplotype block signatures responding to Staphylococcus aureus subclinical mastitis and association with production and health traits24
The pharyngeal taste organ of a blood-feeding insect functions in food recognition24
Characterization of a novel type of carbonic anhydrase that acts without metal cofactors24
The divergent ER-mitochondria encounter structures (ERMES) are conserved in parabasalids but lost in several anaerobic lineages with hydrogenosomes24
Wheat inositol pyrophosphate kinase TaVIH2-3B modulates cell-wall composition and drought tolerance in Arabidopsis24
CircRNA identification and feature interpretability analysis24
The pangenome of the wheat pathogen Pyrenophora tritici-repentis reveals novel transposons associated with necrotrophic effectors ToxA and ToxB24
Two decades taken at speed: genomics, cell biology, ecology, and evolution of protists24
Unravelling the hidden side of laundry: malodour, microbiome and pathogenome24
Optimizing dsRNA sequences for RNAi in pest control and research with the dsRIP web platform24
A novel small molecule, AS1, reverses the negative hedonic valence of noxious stimuli24
Cont-ID: detection of sample cross-contamination in viral metagenomic data23
Ovarian ERβ cistrome and transcriptome reveal chromatin interaction with LRH-123
Range-wide population genomics of common seadragons shows secondary contact over a former barrier and insights on illegal capture23
Monoamine oxidases activity maintains endometrial monoamine homeostasis and participates in embryo implantation and development23
The neglected burden of chronic hypoxia on the resistance of glioblastoma multiforme to first-line therapies23
The function of wing bullae in mayflies (Insecta: Ephemeroptera) reveals new insights into the early evolution of Pterygota23
Non-invasive measurements of respiration and heart rate across wildlife species using Eulerian Video Magnification of infrared thermal imagery23
orsai, the Drosophila homolog of human ETFRF1, links lipid catabolism to growth control23
Detection and characterization of constitutive replication origins defined by DNA polymerase epsilon23
Species co-occurrence and management intensity modulate habitat preferences of forest birds23
Attraction and aversion of noctuid moths to fermented food sources coordinated by olfactory receptors from distinct gene families23
CRISPR-based genome editing of a diurnal rodent, Nile grass rat (Arvicanthis niloticus)23
Spatial and temporal heterogeneity in the lineage progression of fine oligodendrocyte subtypes22
Functional characterization of four opsins and two G alpha subtypes co-expressed in the molluscan rhabdomeric photoreceptor22
An extensional strain sensing mechanosome drives adhesion-independent platelet activation at supraphysiological hemodynamic gradients22
The chromosome-level genome and key genes associated with mud-dwelling behavior and adaptations of hypoxia and noxious environments in loach (Misgurnus anguillicaudatus)22
Evolutionary genomics of socially polymorphic populations of Pogonomyrmex californicus22
Deciphering the roles of subcellular distribution and interactions involving the MEF2 binding region, the ankyrin repeat binding motif and the catalytic site of HDAC4 in Drosophila neuronal morphogene22
Modulation of macrophage inflammatory function through selective inhibition of the epigenetic reader protein SP14021
Developing long-term conservation priority planning for medicinal plants in China by combining conservation status with diversity hotspot analyses and climate change prediction21
CRISPR/Cas9-mediated gene knockout and interallelic gene conversion in human induced pluripotent stem cells using non-integrative bacteriophage-chimeric retrovirus-like particles21
The Sino-Himalayan flora evolved from lowland biomes dominated by tropical floristic elements21
Genetic evidence of tri-genealogy hypothesis on the origin of ethnic minorities in Yunnan21
MUS81 cleaves TOP1-derived lesions and other DNA–protein cross-links21
Plastid phylogenomic insights into relationships of all flowering plant families21
Lessons in immune adaptations to hypoxia revealed by comparative and evolutionary physiology21
The Musa troglodytarum L. genome provides insights into the mechanism of non-climacteric behaviour and enrichment of carotenoids21
Weathered granites and soils harbour microbes with lanthanide-dependent methylotrophic enzymes21
The protein phosphatase PP6 promotes RIPK1-dependent PANoptosis21
Comparative transcriptomic analysis provides insights into the genetic networks regulating oil differential production in oil crops21
Two decades of population genomics: will we ever agree on bacterial species?20
Lipases are differentially regulated by hormones to maintain free fatty acid homeostasis for insect brain development20
PFTK1 kinase regulates axogenesis during development via RhoA activation20
Targeting the gut-lung axis by synbiotic feeding to infants in a randomized controlled trial20
VEGF-dependent testicular vascularisation involves MEK1/2 signalling and the essential angiogenesis factors, SOX7 and SOX1720
Author Correction: Synchronization of inspiratory burst onset along the ventral respiratory column in the neonate mouse is mediated by electrotonic coupling20
Evolution of left–right asymmetry in the sensory system and foraging behavior during adaptation to food-sparse cave environments20
A simple high-throughput method for automated detection of Drosophila melanogaster light-dependent behaviours20
Circulating miRNA repertoire as a biomarker of metabolic and reproductive states in rainbow trout19
Membrane recruitment of Atg8 by Hfl1 facilitates turnover of vacuolar membrane proteins in yeast cells approaching stationary phase19
Resolving biology’s dark matter: species richness, spatiotemporal distribution, and community composition of a dark taxon19
Metamorphic development of the olfactory system in the red flour beetle (Tribolium castaneum, Herbst)19
The precedence effect in spatial hearing manifests in cortical neural population responses19
The crotonylated and succinylated proteins of jujube involved in phytoplasma-stress responses19
MvGraphDTA: multi-view-based graph deep model for drug-target affinity prediction by introducing the graphs and line graphs19
The rapid developments of membrane protein structure biology over the last two decades19
Targeting of REST with rationally-designed small molecule compounds exhibits synergetic therapeutic potential in human glioblastoma cells19
Identifying effective evolutionary strategies-based protocol for uncovering reaction kinetic parameters under the effect of measurement noises19
Toward efficient and high-fidelity metagenomic data from sub-nanogram DNA: evaluation of library preparation and decontamination methods19
DNA methylation atlas and machinery in the developing and regenerating annelid Platynereis dumerilii19
Modular evolution of secretion systems and virulence plasmids in a bacterial species complex19
TRPM4 regulates hilar mossy cell loss in temporal lobe epilepsy19
ADARs regulate cuticle collagen expression and promote survival to pathogen infection19
Protists and protistology in the Anthropocene: challenges for a climate and ecological crisis19
Sex or poison? Genetic pest management in the 21st century19
Behavioral differences among domestic cats in the response to cat-attracting plants and their volatile compounds reveal a potential distinct mechanism of action for actinidine19
Gene losses may contribute to subterranean adaptations in naked mole-rat and blind mole-rat18
The genomes of Vischeria oleaginous microalgae shed light on the molecular basis of hyper-accumulation of lipids18
The Automated Systematic Search Deduplicator (ASySD): a rapid, open-source, interoperable tool to remove duplicate citations in biomedical systematic reviews18
20-Hydroxyecdysone counteracts insulin to promote programmed cell death by modifying phosphoglycerate kinase 118
MultiCycPermea: accurate and interpretable prediction of cyclic peptide permeability using a multimodal image-sequence model18
Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans18
Genome-wide identification and analysis of a cotton secretome reveals its role in resistance against Verticillium dahliae18
Nitrogen fixation by diverse diazotrophic communities can support population growth of arboreal ants18
Doxorubicin induces an alarmin-like TLR4-dependent autocrine/paracrine action of Nucleophosmin in human cardiac mesenchymal progenitor cells18
Publisher Correction to: An increase of phosphatidylcholines in follicular fluid implies attenuation of embryo quality on day 3 post-fertilization18
Unprecedented variation pattern of plastid genomes and the potential role in adaptive evolution in Poales18
Widespread amyloidogenicity potential of multiple myeloma patient-derived immunoglobulin light chains18
Hologenome analysis reveals independent evolution to chemosymbiosis by deep-sea bivalves18
OrgaMapper: a robust and easy-to-use workflow for analyzing organelle positioning18
Deep learning-based behavioral profiling of rodent stroke recovery18
Single-mitochondrion sequencing uncovers distinct mutational patterns and heteroplasmy landscape in mouse astrocytes and neurons17
Publisher Correction: Attractive and repulsive effects of sensory history concurrently shape visual perception17
Phylogenomic analysis of Syngnathidae reveals novel relationships, origins of endemic diversity and variable diversification rates17
Unveiling the ventral morphology of a rare early Cambrian great appendage arthropod from the Chengjiang biota of China17
Solution structure of the type I polyketide synthase Pks13 from Mycobacterium tuberculosis17
Escherichia cryptic clade I is an emerging source of human intestinal pathogens17
Targeted C•G-to-T•A base editing with TALE-cytosine deaminases in plants17
Experimental evidence for enzymatic cell wall dissolution in a microbial protoplast feeder (Orciraptor agilis, Viridiraptoridae)17
Enhancer-promoter interaction maps provide insights into skeletal muscle-related traits in pig genome17
Nuclear lamina component KAKU4 regulates chromatin states and transcriptional regulation in the Arabidopsis genome17
Gram-negative bacteria resist antimicrobial agents by a DzrR-mediated envelope stress response17
FACT regulates pluripotency through proximal and distal regulation of gene expression in murine embryonic stem cells17
Protein secretion zones during overexpression of amylase within the Gram-positive cell wall17
Hyaluronidase-1-mediated glycocalyx impairment underlies endothelial abnormalities in polypoidal choroidal vasculopathy17
Highly distinct genetic programs for peripheral nervous system formation in chordates17
Single-base resolution quantitative genome methylation analysis in the model bacterium Helicobacter pylori by enzymatic methyl sequencing (EM-Seq) reveals influence of strain, growth phase, and methyl17
Griottes: a generalist tool for network generation from segmented tissue images17
Screens in fly and beetle reveal vastly divergent gene sets required for developmental processes17
An HSP90 cochaperone Ids2 maintains the stability of mitochondrial DNA and ATP synthase16
Sex-limited chromosomes and non-reproductive traits16
A novel protein encoded by circRsrc1 regulates mitochondrial ribosome assembly and translation during spermatogenesis16
A phenomics approach for antiviral drug discovery16
Nuclear receptor RXRα binds the precursor of miR-103 to inhibit its maturation16
Novel high-resolution targeted sequencing of the cervicovaginal microbiome16
The amygdala modulates prepulse inhibition of the auditory startle reflex through excitatory inputs to the caudal pontine reticular nucleus16
Caenorhabditis elegans exhibits positive gravitaxis16
Invasive snails, parasite spillback, and potential parasite spillover drive parasitic diseases of Hippopotamus amphibius in artificial lakes of Zimbabwe16
Folate regulates RNA m5C modification and translation in neural stem cells16
Dissecting thrombus-directed chemotaxis and random movement in neutrophil near-thrombus motion in flow chambers16
A novel aminotransferase gene and its regulator acquired in Saccharomyces by a horizontal gene transfer event16
The genomic basis of copper tolerance in Drosophila is shaped by a complex interplay of regulatory and environmental factors16
Analysis of co-isogenic prion protein deficient mice reveals behavioral deficits, learning impairment, and enhanced hippocampal excitability16
The protein aggregation inhibitor YAT2150 has potent antimalarial activity in Plasmodium falciparum in vitro cultures16
Reduced intestinal lipid absorption improves glucose metabolism in aged G2-Terc knockout mice16
Natural abundance isotope ratios to differentiate sources of carbon used during tumor growth in vivo16
Author Correction: Unique sperm haplotypes are associated with phenotypically different sperm subpopulations in Astyanax fish15
Author Correction: Genomic characterization of the world’s longest selection experiment in mouse reveals the complexity of polygenic traits15
Large-scale data analysis for robotic yeast one-hybrid platforms and multi-disciplinary studies using GateMultiplex15
Leveraging the predictive power of 3D organoids in dogs to develop new treatments for man and man’s best friend15
Differentiated adaptative genetic architecture and language-related demographical history in South China inferred from 619 genomes from 56 populations15
Mycobacterium leprae diversity and population dynamics in medieval Europe from novel ancient genomes15
PBertKla: a protein large language model for predicting human lysine lactylation sites15
OLIG2 regulates lncRNAs and its own expression during oligodendrocyte lineage formation15
PPARα regulates YAP protein levels and activity by affecting its ubiquitination modification15
Unveiling cell-type-specific microRNA networks through alternative polyadenylation in glioblastoma15
Taxonomy-aware, sequence similarity ranking reliably predicts phage–host relationships15
Author Correction: Novel function of single-target regulator NorR involved in swarming motility and biofilm formation revealed in Vibrio alginolyticus15
HNF-DDA: subgraph contrastive-driven transformer-style heterogeneous network embedding for drug–disease association prediction15
Asynchronous embryonic germ cell development leads to a heterogeneity of postnatal ovarian follicle activation and may influence the timing of puberty onset in mice15
Two zinc finger proteins, VdZFP1 and VdZFP2, interact with VdCmr1 to promote melanized microsclerotia development and stress tolerance in Verticillium dahliae15
A unique effector secreted by Pseudozyma flocculosa mediates its biocontrol activity15
Ancient genomes from the Tang Dynasty capital reveal the genetic legacy of trans-Eurasian communication at the eastern end of Silk Road15
Deficient DNA base-excision repair in the forebrain leads to a sex-specific anxiety-like phenotype in mice15
The adaptive benefit of evolved increases in hemoglobin-O2 affinity is contingent on tissue O2 diffusing capacity in high-altitude deer mice15
Chronic sleep deprivation disturbs energy balance modulated by suprachiasmatic nucleus efferents in mice15
Correction: Synthetic Micrographs of Bacteria (SyMBac) allows accurate segmentation of bacterial cells using deep neural networks15
Co-option of the limb patterning program in cephalopod eye development15
Attention to visual motion suppresses neuronal and behavioral sensitivity in nearby feature space15
Pangenome analysis reveals transposon-driven genome evolution in cotton15
Guanine crystal formation by bacteria15
Hematopoietic differentiation is characterized by a transient peak of entropy at a single-cell level14
Jasmonates and Histone deacetylase 6 activate Arabidopsis genome-wide histone acetylation and methylation during the early acute stress response14
Vector-virus interaction affects viral loads and co-occurrence14
Monkeying around with venom: an increased resistance to α-neurotoxins supports an evolutionary arms race between Afro-Asian primates and sympatric cobras14
Ex vivo observation of granulocyte activity during thrombus formation14
Adaptive evolution of stress response genes in parasites aligns with host niche diversity14
Application of multiple sgRNAs boosts efficiency of CRISPR/Cas9-mediated gene targeting in Arabidopsis14
Comprehensive analysis of the Kinetoplastea intron landscape reveals a novel intron-containing gene and the first exclusively trans-splicing eukaryote14
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