Journal of Systematics and Evolution

Papers
(The TQCC of Journal of Systematics and Evolution is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)
ArticleCitations
A worldwide phylogenetic classification of the Poaceae (Gramineae) III: An update93
Evolutionary origin of species diversity on the Qinghai–Tibet Plateau67
A new classification of Cyperaceae (Poales) supported by phylogenomic data60
A framework infrageneric classification ofCarex(Cyperaceae) and its organizing principles54
Capturing single‐copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in Vitaceae53
Grasses through space and time: An overview of the biogeographical and macroevolutionary history of Poaceae49
A phylogenomic perspective on gene tree conflict and character evolution in Caprifoliaceae using target enrichment data, with Zabelioideae recognized as a new subfamily47
Phylogenomic relationships and species identification of the olive genus Olea (Oleaceae)41
Origins of cultivars of Chrysanthemum—Evidence from the chloroplast genome and nuclear LFY gene38
Phylogenomics enables biogeographic analysis and a new subtribal classification of Andropogoneae (Poaceae—Panicoideae)35
Plastid and nuclear phylogenomic incongruences and biogeographic implications of Magnolia s.l. (Magnoliaceae)34
Phylogenomics of the hyperdiverse daisy tribes: Anthemideae, Astereae, Calenduleae, Gnaphalieae, and Senecioneae27
Fine‐scale north‐to‐south genetic admixture profile in Shaanxi Han Chinese revealed by genome‐wide demographic history reconstruction25
Out of the Pan‐Himalaya: Evolutionary history of the Paeoniaceae revealed by phylogenomics23
Phylogenomic analysis clarifies the evolutionary origin of Coffea arabica23
A multilocus phylogeny of the moss genus Didymodon and allied genera (Pottiaceae): Generic delimitations and their implications for systematics20
Macroevolutionary insights into sedges (Carex: Cyperaceae): The effects of rapid chromosome number evolution on lineage diversification20
Extensive ethnolinguistic diversity at the crossroads of North China and South Siberia reflects multiple sources of genetic diversity19
The diversification of the northern temperate woody flora – A case study of the Elm family (Ulmaceae) based on phylogenomic and paleobotanical evidence18
Dispersal and adaptive radiation of Bidens (Compositae) across the remote archipelagoes of Polynesia18
Geographical vs. ecological diversification inCarexsectionPhacocystis(Cyperaceae): Patterns hidden behind a twisted taxonomy18
Phylogeny and biogeography of Fagus (Fagaceae) based on 28 nuclear single/low‐copy loci18
Ecological and geological processes impacting speciation modes drive the formation of wide‐range disjunctions within tribe Putorieae (Rubiaceae)17
Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants16
Linalool: A ubiquitous floral volatile mediating the communication between plants and insects15
Cryptic diversity and significant cophylogenetic signal detected by DNA barcoding the rust fungi (Pucciniaceae) of Cyperaceae–Juncaceae14
Phylogenetics of global Camellia (Theaceae) based on three nuclear regions and its implications for systematics and evolutionary history14
Phylogenomics of Perityleae (Compositae) provides new insights into morphological and chromosomal evolution of the rock daisies14
Phylogenomic and comparative analyses of Rheum (Polygonaceae, Polygonoideae)14
Assessing the sensitivity of divergence time estimates to locus sampling, calibration points, and model priors in a RAD‐seq phylogeny ofCarexsectionSchoenoxiphium13
Plastid phylogenomics shed light on intergeneric relationships and spatiotemporal evolutionary history of Melocanninae (Poaceae: Bambusoideae)13
Extensive Miocene speciation in and out of Indochina: The biogeographic history of Typhonium sensu stricto (Araceae) and its implication for the assembly of Indochina flora13
Diversity of higher plants in China13
Phylogenomic study of Amorphophallus (Alismatales; Araceae): When plastid DNA gene sequences help to resolve the backbone subgeneric delineation12
Reconstructing the genetic admixture history of Tai‐Kadai and Sinitic people: Insights from genome‐wide SNP data from South China12
Northern gene flow into southeastern East Asians inferred from genome‐wide array genotyping12
A systematic study of North American Angelica species (Apiaceae) based on nrDNA ITS and cpDNA sequences and fruit morphology12
Low genetic diversity and population connectivity fuel vulnerability to climate change for the Tertiary relict pine Pinus bungeana11
Landscape genomics reveals genetic evidence of local adaptation in a widespread tree, the Chinese wingnut (Pterocarya stenoptera)11
Re‐terrestrialization in the phylogeny of epiphytic plant lineages: Microsoroid ferns as a case study11
Targeted sequencing supports morphology and embryo features in resolving the classification of Cyperaceae tribe Fuireneae s.l.11
Integrative taxonomy of herbaceous plants with narrow fragmented distributions: A case study on Primula merrilliana species complex11
Fossil fruits of Illigera (Hernandiaceae) from the Eocene of central Tibetan Plateau11
Natural interploidy hybridization among the key taxa involved in the origin of horticultural chrysanthemums10
Joint effect of phylogenetic relatedness and trait selection on the elevational distribution of Rhododendron species10
Integrating coalescent‐based species delimitation with ecological niche modeling delimited two species within theStewartia sinensiscomplex (Theaceae)10
Phylogenomics of Fargesia and Yushania reveals a history of reticulate evolution10
Plant–insect chemical communication in ecological communities: An information theory perspective10
Phylogenomics and biogeography of Wisteria: Implications on plastome evolution among inverted repeat‐lacking clade (IRLC) legumes10
Thistle be a mess: Untangling the taxonomy of Cirsium (Cardueae: Compositae) in North America10
Chloroplast genomes of key species shed light on the evolution of the ancient genusIsoetes10
Comparative analysis of 343 plastid genomes of Solanum section Petota: Insights into potato diversity, phylogeny, and species discrimination10
Recent structural variations in the Medicago chloroplast genomes and their horizontal transfer into nuclear chromosomes9
Miocene Ethiopian amber: A new source of fossil cryptogams9
Phylogenetic relationships, hybridization events, and drivers of diversification of East Asian wild grapes as revealed by phylogenomic analyses9
Species delimitation of the liquorice tribe (Leguminosae: Glycyrrhizeae) based on phylogenomic and machine learning analyses9
Fruits of Firmiana and Craigia (Malvaceae) from the Eocene of the Central Tibetan Plateau with emphasis on biogeographic history9
Phylogenomic analysis of the hemp family (Cannabaceae) reveals deep cyto‐nuclear discordance and provides new insights into generic relationships9
Origin and evolution of the Micronesian biota: Insights from molecular phylogenies and biogeography reveal long‐distance dispersal scenarios and founder‐event speciation8
An integrative taxonomic study of Santolina (Asteraceae) from southern France and north‐eastern Spain reveals new endemic taxa8
Phylogeny and biogeography of Calamagrostis (Poaceae: Pooideae: Poeae: Agrostidinae), description of a new genus, Condilorachia (Calothecinae), and expansion of Greeneochloa and <8
Plant diversity and ecology on the Qinghai–Tibet Plateau8
Phylogeny, classification, and biogeography of Afrotrichloris, Apochiton, Coelachyrum, Dinebra, Eleusine, Leptochloa, Schoenefeldia, and a new genus, Schoenefeldiella (Poaceae: Chloridoi8
Phylogeography of Scots pine in Europe and Asia based on mtDNA polymorphisms8
Phylogenomics and biogeography of Torreya (Taxaceae)—Integrating data from three organelle genomes, morphology, and fossils and a practical method for reducing missing data from RAD‐seq8
Global dispersal and diversification of the genus Schoenus (Cyperaceae) from the Western Australian biodiversity hotspot8
Integrative taxonomy recognized a new cryptic species within Stipa grandis from Loess Plateau of China7
Rapid structural evolution of Dendrobium mitogenomes and mito‐nuclear phylogeny discordances in Dendrobium (Orchidaceae)7
Altitude‐related shift of relative abundance from insect to sunbird pollination in Elaeagnus umbellata (Elaeagnaceae)7
Pleurocordyceps gen. nov. for a clade of fungi previously included in Polycephalomyces based on molecular phylogeny and morphology7
New Eocene fossil fruits and leaves of Menispermaceae from the central Tibetan Plateau and their biogeographic implications7
Linked selection, ancient polymorphism, and ecological adaptation shape the genomic landscape of divergence in Quercus dentata7
Plastid phylogenomics and biogeography of the genus Monochoria (Pontederiaceae)7
Exploring the impact of RNA editing on mitochondrial phylogenetic analyses in liverworts, an early land plant lineage7
Phylogeny and taxonomy of Afrocayratia, a new genus of Vitaceae from continental Africa and Madagascar7
Collections‐based systematics and biogeography in the 21st century: A tribute to Dr. Vicki Funk7
Biogeography, timing, and life‐history traits in the PPAM clade: Coleanthinae (syn. Puccinelliinae), Poinae, Alopecurinae superclade, Miliinae, and Avenulinae and Phleinae (Poaceae, Pooideae, Poeae)7
Mutational meltdown or controlled chain reaction: The dynamics of rapid plastome evolution in the hyperdiversity of Poaceae7
Monograph of Carex section Schiedeanae (Cyperaceae): Unexpected taxonomic and ecological diversity in a Mexican sedge clade7
Nuclear and plastid phylogenomic analyses provide insights into the reticulate evolution, species delimitation, and biogeography of the Sino‐Japanese disjunctive Diabelia (Caprifoliaceae)7
Ecological specialization promotes diversity and diversification in the Eastern Mediterranean genus Ricotia (Brassicaceae)7
Reproductive strategies of animal‐pollinated plants on high mountains: A review of studies from the “Third Pole”6
Population genetic structure and classification of cultivated and wild pea (Pisum sp.) based on morphological traits and SSR markers6
First fossil evidence of Palaeocarya (Engelhardioideae: Juglandaceae) from India and its biogeographical implications6
Time to update the sectional classification ofIlex(Aquifoliaceae): New insights fromIlexphylogeny, morphology, and distribution6
DNA barcodes and microsatellites: How they complement for species identification in the complex genus Tamarix (Tamaricaceae)6
Secondary pollen presentation: More than to increase pollen transfer precision6
A cytosystematic study of the Dianthus virgineus complex (Caryophyllaceae) in the Central Mediterranean6
Herbarium phylogenomics: Resolving the generic status of the enigmatic Pseudobartsia (Orobanchaceae)6
Hybridization and genome duplication for early evolutionary success in the Asian Palmate group of Araliaceae6
Sexual dimorphism, temporal niche differentiation, and evidence for the Jack Sprat effect in an annual dioecious plant6
A comprehensive species sampling sheds light on the molecular phylogenetics of Calothecinae (Poaceae, Pooideae, Poeae): Evidence for a new subtribe and multiple genera within the Chascolytrum c6
A comprehensive analysis of higher‐level phylogenetic relationships of Hemiptera based on transcriptome data6
Enhanced precipitation has driven the evolution of subtropical evergreen broad‐leaved forests in eastern China since the early Miocene: Evidence from ring‐cupped oaks6
Trait evolution rates shape continental patterns of species richness in North America's most diverse angiosperm genus (Carex, Cyperaceae)6
Revisiting of Carex sect. Confertiflorae s.l. (Cyperaceae): New data from molecular and morphological evidence and first insights on Carex biogeography in East Asia6
Phylogenetic relationships withinPyrenodesmiasensu lato and the role of pigments in its taxonomic interpretation6
Soil burial induced dormancy in weedy rice seeds through hormone level changes: Implications in adaptive evolution and weed control6
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