Molecular Plant

Article	Citations
Temperature regulation of CLAVATA3 arabinosylation	3306
From plastids to the cytosol: Redefining boundaries for provitamin A biofortification in plants	393
Breaking the interspecific reproductive barriers in Brassicaceae	346
Structural basis of RLP activation by a pathogen glycoside hydrolase	316
Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly	290
Antagonistic regulation of systemin signaling acts on ligands and receptors	281
Long-read sequencing (method of the year 2022): The way forward for plant omics research	269
CRISPR-Cas-based plant genome engineering goes viral	245
Identification and biosynthesis of plant papanridins, a group of novel oligomeric flavonoids	194
Rice Gene Index: A comprehensive pan-genome database for comparative and functional genomics of Asian rice	180
Mitigating growth-stress tradeoffs via elevated TOR signaling in rice	174
An endophytic fungus interacts with the defensin-like protein OsCAL1 to regulate cadmium allocation in rice	169
Structural variation (SV)-based pan-genome and GWAS reveal the impacts of SVs on the speciation and diversification of allotetraploid cottons	141
A solo-LTR insertion in the CreTPS3a promoter enhances γ-terpinene biosynthesis and affects consumer preference for tangerine-like aroma in citrus fruits	134
Vacuolar H+-ATPase and BZR1 form a feedback loop to regulate the homeostasis of BR signaling in Arabidopsis	128
Chloroplast immunity: A cornerstone of plant defense	126
Plant triterpenoid saponins function as susceptibility factors to promote the pathogenicity of Botrytis cinerea	121
Genomic insights into the genetic basis of cotton breeding in China	120
Exploring the oasis of plant genomes: From genetic variations to function and beyond	117
Plant viruses hijack and stabilize host Ubiquitin-Specific Protease 14 to prevent viral protein degradation for efficient infection	116
A new oxidative pathway of nitric oxide production from oximes in plants	116
Temperature-dependent regulation of seed dormancy	113
Warm temperature activates the TCP15-HDA4 module to suppress shoot branching by promoting auxin biosynthesis and signaling in tomato	113
A telomere-to-telomere gap-free assembly of soybean genome	112
SCOOP10 and SCOOP12 peptides act through MIK2 receptor-like kinase to antagonistically regulate Arabidopsis leaf senescence	111

Alternative splicing of OsNPR3 promoted by the bacterial TAL effectors-targeted splicing regulator OsRBP11 antagonizes OsNPR1 function and enhances disease susceptibility in rice	109
Woody plant cell walls: Fundamentals and utilization	108
Efficient and multiplex gene upregulation in plants through CRISPR-Cas-mediated knockin of enhancers	107
Global wild rice germplasm resources conservation alliance: World Wild-Rice Wiring	107
Mitophagy: From the dark into the spotlight	105
Mirids secrete a TOPLESS targeting protein to enhance JA-mediated defense and gossypol accumulation for antagonizing cotton bollworms on cotton plants	105
SIZ1-mediated SUMOylation of CPSF100 promotes plant thermomorphogenesis by controlling alternative polyadenylation	104
Plant and animal positive-sense single-stranded RNA viruses encode small proteins important for viral infection in their negative-sense strand	104
A mortise–tenon joint system facilitates precise targeted DNA insertion and replacement in rice	104
Activation of multilayered plant immunity through spatiotemporal expression of Botrytis cinerea BcCrh1-derived dual epitopes	102
Robust transcriptional indicators of immune cell death revealed by spatiotemporal transcriptome analyses	101
PEP7 acts as a peptide ligand for the receptor kinase SIRK1 to regulate aquaporin-mediated water influx and lateral root growth	99
Regulating Arbuscular Mycorrhizal Permissiveness	98
How ignoring market-informed crop varietal development fuels food price volatility	96
Duet between stress granules and glutathionylation regulates cytosolic redox state to maintain proteostasis in Arabidopsis	96
The CropGPT project: Call for a global, coordinated effort in precision design breeding driven by AI using biological big data	95
A new class of receptors for plant G-proteins	91
Salicylic acid inhibits gibberellin signaling through receptor interactions	90
TBtools-II: A “one for all, all for one” bioinformatics platform for biological big-data mining	87
GRP7 phase separation as an interpreter of temperature cues	86
Wheat adaptation to environmental stresses under climate change: Molecular basis and genetic improvement	86
Potatome: Harnessing natural variation of potatoes	83
Too SHY 2 repress	83
Coordinated regulation of RNA metabolism and silencing by ABA signaling in plant abiotic stress responses	83
Super graph-based pan-genome: Bringing rice functional genomic study into a new dawn	82
Domestication-related changes at PvMYB26 reduce pod shattering in common bean and shed light on the origins of agriculture in the Americas	82
Extracellular vesicles in plants	81
Structure under stress: Conserved RNA structure in plant-environment interactions	81
Making connections with cell surface auxin signaling	78
An epic war between an oomycete pathogen and plants	75
Dephosphorylation and polyubiquitination of the histone variant H2AX act coordinately to terminate DNA damage signaling in Arabidopsis	72
Genomic insights into stepwise selection reshaping fruit traits and male-biased selection driving hermaphroditism in papayas	72
On the evolution and genetic diversity of the bread wheat D genome	71
Phase separation of the redox sensor RCD1 mediates differential ROS signals to regulate plant growth and stress responses	70
The dual-targeted transcription factor BAI1 orchestrates nuclear and plastid gene transcription in land plants	70
Manipulation of photosensory and circadian signaling restricts phenotypic plasticity in response to changing environmental conditions in Arabidopsis	70
Receptor-like protein kinases in plants: Post-translational regulation and functional effects	69
The protein–protein interaction landscape of transcription factors during gynoecium development in Arabidopsis	69
Arabidopsis SYP121 acts as an ROP2 effector in the regulation of root hair tip growth	69
The super-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread forest trees	68
Haplotype-based phylogenetic analysis and population genomics uncover the origin and domestication of sweetpotato	68
Synergizing genome editing and artificial intelligence for predictive crop design	68
Adenosine monophosphate enhances callus regeneration competence for de novo plant organogenesis	67
Plant-specific casein kinases phosphorylate and stabilize SMXL6/7/8 to suppress strigolactone signaling and promote shoot branching	66
Interspecific plant interaction via root exudates structures the disease suppressiveness of rhizosphere microbiomes	66
pH sensing in plants	65
Ancestral genome reconstruction for studies of the green lineage	65
The OsIMP1–OsRLK5 immunopeptide–receptor pair confers bacterial and fungal disease resistance in rice	64
Improving maize seed protein content and nitrogen-use efficiency by a teosinte asparagine synthetase	64
A decoy receptor derived from alternative splicing fine-tunes cytokinin signaling in Arabidopsis	63

Differentiation trajectories and biofunctions of symbiotic and un-symbiotic fate cells in root nodules of Medicago truncatula	62
How sodium gets sequestered in the vacuoles of salinized plants?	61
Adenylate cyclases tune heat-dependent stomatal responses	61
QT–GWAS: A novel method for unveiling biosynthetic loci affecting qualitative metabolic traits	59
Endophyte-engineered plant immunity: A post-GMO strategy for programmable crop defense	58
Engineering crop resistance by manipulating disease susceptibility genes	58
HDT2-mediated lysine deacetylation promotes phytochrome A degradation during photomorphogenesis in Arabidopsis	58
International research initiative on genomics-guided sugarcane breeding	58
A k-mer-based pangenome approach for cataloging seed-storage-protein genes in wheat to facilitate genotype-to-phenotype prediction and improvement of end-use quality	58
Back to wild relatives for future breeding through super-pangenome	57
Putrescine, a double-edged molecule in plant–bacterium interactions	57
The Dof transcription factor COG1 acts as a key regulator of plant biomass by promoting photosynthesis and starch accumulation	57
Decoding the senses: A new player in plant–virus dynamics unveiled	56
Uncover the mystery of pleiotropic effects of PROG1 during rice domestication	56
Pathogen-induced methylglyoxal negatively regulates rice bacterial blight resistance by inhibiting OsCDR1 protease activity	56
A viral movement protein targets host catalases for 26S proteasome-mediated degradation to facilitate viral infection and aphid transmission in wheat	56
RAF22, ABI1 and OST1 form a dynamic interactive network that optimizes plant growth and responses to drought stress in Arabidopsis	56
Reprogrammable design of DELLA as a strategy to mitigate alkaline–heat stress for sustainable agriculture	56
Small holes, big impact: Stomata in plant–pathogen–climate epic trifecta	55
FERONIA signaling maintains cell wall integrity during brassinosteroid-induced cell expansion in Arabidopsis	55
Finding my way: The role of dirigent proteins in lignin assembly	53
The transcription factor MYB44 suppresses starch synthesis to negatively regulate grain weight and yield in wheat and rice	53
WGDI: A user-friendly toolkit for evolutionary analyses of whole-genome duplications and ancestral karyotypes	53
Elucidation and de novo reconstitution of glyceollin biosynthesis	52
SH3P2, an SH3 domain-containing protein that interacts with both Pib and AvrPib, suppresses effector-triggered, Pib-mediated immunity in rice	52
Streamline unsupervised machine learning to survey and graph indel-based haplotypes from pan-genomes	51
Wheat2035: Integrating pan-omics and advanced biotechnology for future wheat design	50
A chromosome-level genome assembly reveals that a bipartite gene cluster formed via an inverted duplication controls monoterpenoid biosynthesis in Schizonepeta tenuifolia	50
Persulfidation of host NADPH oxidase RbohB by rhizobial 3-mercaptopyruvate sulfurtransferase maintains redox homeostasis and promotes symbiotic nodulation in soybean	50
Wheat-RegNet: An encyclopedia of common wheat hierarchical regulatory networks	50
Rice SINA E3 ligases dichotomously control ERECTA1 ubiquitination and stability to regulate panicle morphogenesis and grain yield	50
9,10-KODA, an α-ketol produced by the tonoplast-localized 9-lipoxygenase ZmLOX5, plays a signaling role in maize defense against insect herbivory	49
AlphaFold-guided redesign of a plant pectin methylesterase inhibitor for broad-spectrum disease resistance	49
Smart Breeding Platform: A web-based tool for high-throughput population genetics, phenomics, and genomic selection	49
An MCIA-like complex is required for mitochondrial complex I assembly and seed development in maize	49
FERONIA-mediated TIR1/AFB2 oxidation stimulates auxin signaling in Arabidopsis	48
Structural insights into a plant-conserved DHFR-TS reveal a selective herbicide target	48
Deep learning uncovers conserved regulatory logic and element dosage underlying stable gene expression in grasses	48
Blue revolution for food security under carbon neutrality: A case from the water-saving and drought-resistance rice	48
Gene editing produces CoQ10 rice	47
Endosperm ontogeny through the lens of epigenetics	47
A single-cell-resolution spatial transcriptomic atlas decodes wheat spike development and yield potential	46
Communication among nucleus, plastids, and mitochondria	46
The cartography of plant immunity: Proximity labeling puts a novel SGT1–NSL1 regulatory module on the map	45
Systematic identification of wheat spike developmental regulators by integrated multi-omics, transcriptional network, GWAS, and genetic analyses	45
Calcium-dependent activation of CPK12 facilitates its cytoplasm-to-nucleus translocation to potentiate plant hypoxia sensing by phosphorylating ERF-VII transcription factors	44
Design of effective synbiotics against aboveground insect herbivory through characterization of host plant rhizosphere microbiota and metabolites	43
IIIVmrMLM: The R and C++ tools associated with 3VmrMLM, a comprehensive GWAS method for dissecting quantitative traits	43
A “protector” model for membrane trafficking-regulated and NLR-mediated plant immunity	43
Regulatory dynamics of the higher-plant PSI–LHCI supercomplex during state transitions	43
Establishment and functions of the Casparian strip	43
A top HAT: A maize mutant hypersusceptible to Agrobacterium transformation	43
Cultivating potential: Harnessing plant stem cells for agricultural crop improvement	43
SnRK2.5-mediated phosphorylation of PIN2 links osmotic stress signaling to auxin-dependent root adaptive growth in Arabidopsis	43
Histone H4K8hib modification promotes gene expression and regulates rice immunity	42
Green Revolution-associated DELLA accumulation enhances salt tolerance in cereals by disrupting INDETERMINATE SPIKELET1 biomolecular condensates	42
Understanding source–sink interactions: Progress in model plants and translational research to crops	41
A new oxidative pathway of nitric oxide production from oximes in plants	41
A conserved translational repression module buffers sugar-inducible root vascular proliferation	40
Deciphering plant phytoalexin biosynthetic pathways for broad-spectrum disease resistance	40
Asymmetric brassinosteroid signaling and biosynthesis during symmetric cell divisions	40
Specialized metabolites as versatile tools in shaping plant–microbe associations	40
Development and maintenance of the ligular region of maize leaves	40
Strigolactone-gibberellin crosstalk mediated by a distant silencer fine-tunes plant height in upland cotton	39
Phase separation of the nuclear pore complex facilitates selective nuclear transport to regulate plant defense against pathogen and pest invasion	38
Darwin’s orchid: Plant–pollinator coevolution, chemical ecology, and genomic insights into convergent evolution of floral scent biosynthesis	38
Low phosphorus promotes NSP1–NSP2 heterodimerization to enhance strigolactone biosynthesis and regulate shoot and root architecture in rice	38
Volatilome-based GWAS identifies OsWRKY19 and OsNAC021 as key regulators of rice aroma	38
PlantscRNAdb 4.0: Improved marker identification and annotation under a cell-type uniformity for plants	37
Jazzin’ up nodules: The groovy role of jasmonic acid during nodulation	37
Posttranslational regulation of TOR kinase activity controls resource allocation between plant growth and immunity in Arabidopsis	37
CONSTANS alters the circadian clock in Arabidopsis thaliana	37
Host-adapted enzymatic deconstruction of acetylated xylan limits immune activation and facilitates mutualistic colonization of monocot roots	37
Age-dependent nuclear accumulation of a membrane-associated NAC transcription factor GER1 activates SA biosynthesis to promote leaf senescence in Arabidopsis	37
Cryo-EM structures of Arabidopsis heteromultimeric isoamylase complex essential for starch granule biogenesis	37
OsPRMT6a-mediated arginine methylation of OsJAZ1 regulates jasmonate signaling and spikelet development in rice	36
Two complete telomere-to-telomere genome assemblies of Medicago reveal the landscape and evolution of its centromeres	36
Mixing and matching SMXL proteins to fine-tune strigolactone responses	36
Steroidal scaffold decorations in Solanum alkaloid biosynthesis	36
AraENCODE: A comprehensive epigenomic database of Arabidopsis thaliana	36

Decoding dichotomous regulation for decoupling yield traits	36
Activation of stress-response genes by retrograde signaling-mediated destabilization of nuclear importin IMPα-9 and its interactor TPR2	36
A new phase of treasure hunting in plant genebanks	36
Botanical timekeepers: Deciphering evolutionary relationships in plants	35
Genetic and molecular exploration of maize environmental stress resilience: Toward sustainable agriculture	35
Breaking the spatial restriction of pluripotency acquisition by environmental stimuli	35
Nitrate confers rice adaptation to high ammonium by suppressing its uptake but promoting its assimilation	35
How a species boundary becomes fuzzy: Molecular control of reproductive isolation	35
Root bacteria fine-tune rice tillering through phytohormone interference and mimicry	35
Evolutionarily conserved spatiotemporal cell wall patterning during cell division	35
Control of H2S synthesis by the monomer–oligomer transition of OsCBSX3 for modulating rice growth-immunity balance	34
The tug-of-war between growth and cold tolerance in plants: How to create resilient crops with maintained biomass	34
Multifaceted roles of phosphorylation-mediated regulation of heterotrimeric G proteins in plant cellular signaling	34
Telomere-to-telomere genome assembly reveals the genomic architecture of disease resistance and yield coordination in elite wheat YM33	34
From the T2T cotton genome to a tripartite regulatory module governing embryo folding	34
NAC1 goes TOPLESS to manage cortex proliferation	34
The winners of Rising Stars in Plant Sciences 2024	34
Underwater survival: Calcium signaling keeps plants afloat	33
A molecular framework underlying low-nitrogen-induced early leaf senescence in Arabidopsis thaliana	33
The RALF1-FERONIA complex interacts with and activates TOR signaling in response to low nutrients	33
Protein phase separation of plant nuclear pore complex	33
Nitrogen–iron interaction as an emerging factor influencing crop productivity and nutrient use efficiency	33
Perenniality: From model plants to applications in agriculture	33
Heat stress-induced decapping of WUSCHEL mRNA enhances stem cell thermotolerance in Arabidopsis	32
The BCM1-EGY1 module balances chlorophyll biosynthesis and breakdown to confer chlorophyll homeostasis in land plants	32
GEFormer: A genotype-environment interaction-based genomic prediction method that integrates the gating multilayer perceptron and linear attention mechanisms	32
WD40-protein-mediated crosstalk among three epigenetic marks regulates chromatin states and yield in rice	32
Super-resolution multimodal spatial transcriptomics reveals an ovoid stem-cell niche structuring de novo shoot regeneration	32
Distinctive and complementary roles of E2F transcription factors during plant replication stress responses	32
A telomere-to-telomere genome assembly of the cultivated peanut	32
Regulation of jasmonate signaling by reversible acetylation of TOPLESS in Arabidopsis	31
Insects manipulate plant immunity via a cross-kingdom small RNA effector	31
A step forward in breeding for ratooning ability in rice	31
Cell-type-specific transcriptomics reveals that root hairs and endodermal barriers play important roles in beneficial plant-rhizobacterium interactions	30
SUMOylation-modified Pelota-Hbs1 RNA surveillance complex restricts the infection of potyvirids in plants	30
Arabidopsis WRKY1 promotes monocarpic senescence by integrative regulation of flowering, leaf senescence, and nitrogen remobilization	30
Toward the next step to the New Green Revolution	30
High-density cultivation of synthetic apomictic hybrid rice achieves near-complete diploidization and parental-equivalent yield in field trials	30
Exploring the maize transcriptional regulatory landscape through large-scale profiling of transcription factor binding sites	29
Comparative genomic and transcriptomic analyses uncover the molecular basis of high nitrogen-use efficiency in the wheat cultivar Kenong 9204	29
Chloroplast state transitions modulate nuclear genome stability via cytokinin signaling in Arabidopsis	29
Presymbiotic activation of karrikin signaling creates a permissive state for arbuscular mycorrhizal symbiosis by derepressing the NSP1–NSP2–SLR1 transcriptional complex in rice	29
The RLI1–OsPUB77–OsBZR3 module mediates the crosstalk between phosphate starvation and brassinosteroid signaling pathways to shape rice shoot architecture	29
Erasing and rewriting cell identity during plant organ regeneration	29
Polycomb and trithorax: Their yin-yang dynamics in plants	29
Epigenetic reprogramming by glucose-TOR signaling controls plant development	29
A complete reference genome assembly for foxtail millet and Setaria-db, a comprehensive database for Setaria	29
The ferroxidases LPR1 and LPR2 control iron translocation in the xylem of Arabidopsis plants	29
A SPX domain vacuolar transporter links phosphate sensing to homeostasis in Arabidopsis	29