Molecular Plant

Article	Citations
Evolutionarily conserved mechanosensor PIEZO in land plants	1329
DET1 regulates HY5 through COP1: A new paradigm in the regulation of HY5	287
Toward haplotype studies in polyploid plants to assist breeding	239
Temperature-dependent regulation of seed dormancy	226
CRISPR-Cas-based plant genome engineering goes viral	205
From plastids to the cytosol: Redefining boundaries for provitamin A biofortification in plants	202
Identification and biosynthesis of plant papanridins, a group of novel oligomeric flavonoids	189
Structural basis of RLP activation by a pathogen glycoside hydrolase	174
Breaking the interspecific reproductive barriers in Brassicaceae	158
SCOOP10 and SCOOP12 peptides act through MIK2 receptor-like kinase to antagonistically regulate Arabidopsis leaf senescence	153
Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly	153
“Je t'aime moi non plus": A love-hate relationship between iron and phosphate	147
Rice Gene Index: A comprehensive pan-genome database for comparative and functional genomics of Asian rice	135
Long-read sequencing (method of the year 2022): The way forward for plant omics research	129
Plant triterpenoid saponins function as susceptibility factors to promote the pathogenicity of Botrytis cinerea	129
Loss of two families of SPX domain-containing proteins required for vacuolar polyphosphate accumulation coincides with the transition to phosphate storage in green plants	128
Mitigating growth-stress tradeoffs via elevated TOR signaling in rice	120
A new oxidative pathway of nitric oxide production from oximes in plants	118
Rice metabolic regulatory network spanning the entire life cycle	116
Efficient and multiplex gene upregulation in plants through CRISPR-Cas-mediated knockin of enhancers	116
Chloroplast immunity: A cornerstone of plant defense	108
A telomere-to-telomere gap-free assembly of soybean genome	106
Genomic insights into the genetic basis of cotton breeding in China	105
The OsNAC23-Tre6P-SnRK1a feed-forward loop regulates sugar homeostasis and grain yield in rice	101
Woody plant cell walls: Fundamentals and utilization	100

An endophytic fungus interacts with the defensin-like protein OsCAL1 to regulate cadmium allocation in rice	99
Vacuolar H+-ATPase and BZR1 form a feedback loop to regulate the homeostasis of BR signaling in Arabidopsis	98
A novel miR167a-OsARF6-OsAUX3 module regulates grain length and weight in rice	98
Structural variation (SV)-based pan-genome and GWAS reveal the impacts of SVs on the speciation and diversification of allotetraploid cottons	95
Complexes and complexities: INO80 takes center stage	95
Plant and animal positive-sense single-stranded RNA viruses encode small proteins important for viral infection in their negative-sense strand	95
Global wild rice germplasm resources conservation alliance: World Wild-Rice Wiring	94
Mitophagy: From the dark into the spotlight	94
Salicylic acid inhibits gibberellin signaling through receptor interactions	92
PEP7 acts as a peptide ligand for the receptor kinase SIRK1 to regulate aquaporin-mediated water influx and lateral root growth	92
A FLASH pipeline for arrayed CRISPR library construction and the gene function discovery of rice receptor-like kinases	92
A new class of receptors for plant G-proteins	91
Hydrogen sulfide-linked persulfidation of ABI4 controls ABA responses through the transactivation of MAPKKK18 in Arabidopsis	91
Population genomic analysis reveals domestication of cultivated rye from weedy rye	91
The nucleolus as a genomic safe harbor for strong gene expression in Nannochloropsis oceanica	90
Mirids secrete a TOPLESS targeting protein to enhance JA-mediated defense and gossypol accumulation for antagonizing cotton bollworms on cotton plants	90
Light-triggered reactions do not bias boron deficiency-induced root inhibition of Arabidopsis seedlings grown in Petri dishes	89
Primary metabolism: It’s more than what's for dinner	88
Nucleocytoplasmic trafficking during immunity	87
Thermomemory in shoot apical meristem: Regulation of carbohydrate metabolism and stem cell identity	84
Pyramiding favorable alleles in an elite wheat variety in one generation by CRISPR-Cas9-mediated multiplex gene editing	83
Robust transcriptional indicators of immune cell death revealed by spatiotemporal transcriptome analyses	81
How ignoring market-informed crop varietal development fuels food price volatility	80
SIZ1-mediated SUMOylation of CPSF100 promotes plant thermomorphogenesis by controlling alternative polyadenylation	79
The HB40-JUB1 transcriptional regulatory network controls gibberellin homeostasis in Arabidopsis	77
A cryptic inhibitor of cytokinin phosphorelay controls rice grain size	77
An epic war between an oomycete pathogen and plants	76
The CropGPT project: Call for a global, coordinated effort in precision design breeding driven by AI using biological big data	76
TBtools-II: A “one for all, all for one” bioinformatics platform for biological big-data mining	76
Wheat adaptation to environmental stresses under climate change: Molecular basis and genetic improvement	76
Too SHY 2 repress	74
GRP7 phase separation as an interpreter of temperature cues	74
On the evolution and genetic diversity of the bread wheat D genome	73
Super graph-based pan-genome: Bringing rice functional genomic study into a new dawn	71
Chemical control of receptor kinase signaling by rapamycin-induced dimerization	71
Making connections with cell surface auxin signaling	71
Adenosine monophosphate enhances callus regeneration competence for de novo plant organogenesis	71
Haplotype-based phylogenetic analysis and population genomics uncover the origin and domestication of sweetpotato	70
Manipulation of photosensory and circadian signaling restricts phenotypic plasticity in response to changing environmental conditions in Arabidopsis	70
Arabidopsis SYP121 acts as an ROP2 effector in the regulation of root hair tip growth	68
PDX1.1-dependent biosynthesis of vitamin B6 protects roots from ammonium-induced oxidative stress	68
The super-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread forest trees	67
The dual-targeted transcription factor BAI1 orchestrates nuclear and plastid gene transcription in land plants	67
The protein–protein interaction landscape of transcription factors during gynoecium development in Arabidopsis	66
Zinc in plants: Integrating homeostasis and biofortification	65
Ancestral genome reconstruction for studies of the green lineage	64
Interspecific plant interaction via root exudates structures the disease suppressiveness of rhizosphere microbiomes	64
A decoy receptor derived from alternative splicing fine-tunes cytokinin signaling in Arabidopsis	63
Finding my way: The role of dirigent proteins in lignin assembly	63
Engineering crop resistance by manipulating disease susceptibility genes	63

TMK: A crucial piece of the acid growth puzzle	62
Improving maize seed protein content and nitrogen-use efficiency by a teosinte asparagine synthetase	62
Plant cytochrome P450 plasticity and evolution	62
QT–GWAS: A novel method for unveiling biosynthetic loci affecting qualitative metabolic traits	62
Uncover the mystery of pleiotropic effects of PROG1 during rice domestication	62
pH sensing in plants	61
Back to wild relatives for future breeding through super-pangenome	60
FERONIA signaling maintains cell wall integrity during brassinosteroid-induced cell expansion in Arabidopsis	59
A viral movement protein targets host catalases for 26S proteasome-mediated degradation to facilitate viral infection and aphid transmission in wheat	58
Tonoplast-associated calcium signaling regulates manganese homeostasis in Arabidopsis	57
The Dof transcription factor COG1 acts as a key regulator of plant biomass by promoting photosynthesis and starch accumulation	57
International research initiative on genomics-guided sugarcane breeding	57
RAF22, ABI1 and OST1 form a dynamic interactive network that optimizes plant growth and responses to drought stress in Arabidopsis	56
The lncRNA MARS modulates the epigenetic reprogramming of the marneral cluster in response to ABA	56
Small holes, big impact: Stomata in plant–pathogen–climate epic trifecta	56
Development of a widely targeted volatilomics method for profiling volatilomes in plants	56
A k-mer-based pangenome approach for cataloging seed-storage-protein genes in wheat to facilitate genotype-to-phenotype prediction and improvement of end-use quality	56
WGDI: A user-friendly toolkit for evolutionary analyses of whole-genome duplications and ancestral karyotypes	55
Pathogen-induced methylglyoxal negatively regulates rice bacterial blight resistance by inhibiting OsCDR1 protease activity	55
Reprogrammable design of DELLA as a strategy to mitigate alkaline–heat stress for sustainable agriculture	55
The power of chromosome-scale, haplotype-resolved genomes	53
Elucidation and de novo reconstitution of glyceollin biosynthesis	53
Wheat-RegNet: An encyclopedia of common wheat hierarchical regulatory networks	53
Differentiation trajectories and biofunctions of symbiotic and un-symbiotic fate cells in root nodules of Medicago truncatula	53
Arsenite provides a selective signal that coordinates arsenate uptake and detoxification through the regulation of PHR1 stability in Arabidopsis	53
The supercomplex formation between the chloroplast NADH dehydrogenase-like complex and photosystem I	52
Streamline unsupervised machine learning to survey and graph indel-based haplotypes from pan-genomes	52
A cell wall-localized NLR confers resistance to Soybean mosaic virus by recognizing viral-encoded cylindrical inclusion protein	52
9,10-KODA, an α-ketol produced by the tonoplast-localized 9-lipoxygenase ZmLOX5, plays a signaling role in maize defense against insect herbivory	52
SH3P2, an SH3 domain-containing protein that interacts with both Pib and AvrPib, suppresses effector-triggered, Pib-mediated immunity in rice	51
An MCIA-like complex is required for mitochondrial complex I assembly and seed development in maize	51
A transceptor–channel complex couples nitrate sensing to calcium signaling in Arabidopsis	51
A chromosome-level genome assembly reveals that a bipartite gene cluster formed via an inverted duplication controls monoterpenoid biosynthesis in Schizonepeta tenuifolia	50
Coordinated regulation of plant immunity by poly(ADP-ribosyl)ation and K63-linked ubiquitination	50
Blue revolution for food security under carbon neutrality: A case from the water-saving and drought-resistance rice	49
Smart Breeding Platform: A web-based tool for high-throughput population genetics, phenomics, and genomic selection	48
FERONIA-mediated TIR1/AFB2 oxidation stimulates auxin signaling in Arabidopsis	48
OsHYPK-mediated protein N-terminal acetylation coordinates plant development and abiotic stress responses in rice	48
AlphaFold-guided redesign of a plant pectin methylesterase inhibitor for broad-spectrum disease resistance	48
Endosperm ontogeny through the lens of epigenetics	47
A “protector” model for membrane trafficking-regulated and NLR-mediated plant immunity	47
Wheat2035: Integrating pan-omics and advanced biotechnology for future wheat design	47
The cartography of plant immunity: Proximity labeling puts a novel SGT1–NSL1 regulatory module on the map	47
Histone H4K8hib modification promotes gene expression and regulates rice immunity	47
Gene duplication drove the loss of awn in sorghum	46
Access to biodiversity for food production: Reconciling open access digital sequence information with access and benefit sharing	46
A virus-derived siRNA activates plant immunity by interfering with ROS scavenging	45
Regulatory dynamics of the higher-plant PSI–LHCI supercomplex during state transitions	45
Gene editing produces CoQ10 rice	45
Systematic identification of wheat spike developmental regulators by integrated multi-omics, transcriptional network, GWAS, and genetic analyses	45
Understanding source–sink interactions: Progress in model plants and translational research to crops	44
Cultivating potential: Harnessing plant stem cells for agricultural crop improvement	44
Four plasma membrane-localized MGR transporters mediate xylem Mg2+ loading for root-to-shoot Mg2+ translocation in Arabidopsis	44
IIIVmrMLM: The R and C++ tools associated with 3VmrMLM, a comprehensive GWAS method for dissecting quantitative traits	44
Bromodomain-containing proteins BRD1, BRD2, and BRD13 are core subunits of SWI/SNF complexes and vital for their genomic targeting in Arabidopsis	44
Nuclear translocation of OsMFT1 that is impeded by OsFTIP1 promotes drought tolerance in rice	44
Pollen hydration: A tale of two peptides	43
WheatOmics: A platform combining multiple omics data to accelerate functional genomics studies in wheat	43
Nitric oxide regulation of plant metabolism	43
Molecular mechanism of Verticillium dahliae-induced leaf senescence	43
Calcium-dependent activation of CPK12 facilitates its cytoplasm-to-nucleus translocation to potentiate plant hypoxia sensing by phosphorylating ERF-VII transcription factors	43
Development and maintenance of the ligular region of maize leaves	42
Mixing and matching SMXL proteins to fine-tune strigolactone responses	42
OsPRMT6a-mediated arginine methylation of OsJAZ1 regulates jasmonate signaling and spikelet development in rice	42
Jazzin’ up nodules: The groovy role of jasmonic acid during nodulation	42
A new phase of treasure hunting in plant genebanks	40
Phase separation of the nuclear pore complex facilitates selective nuclear transport to regulate plant defense against pathogen and pest invasion	40
Rise of the ethylene biosynthesis machinery from the Cβ-S lyase	40
CONSTANS alters the circadian clock in Arabidopsis thaliana	40
Volatilome-based GWAS identifies OsWRKY19 and OsNAC021 as key regulators of rice aroma	40
AraENCODE: A comprehensive epigenomic database of Arabidopsis thaliana	39
Targeting of anti-microbial proteins to the hyphal surface amplifies protection of crop plants against Phytophthora pathogens	39
Steroidal scaffold decorations in Solanum alkaloid biosynthesis	39
Nitrate confers rice adaptation to high ammonium by suppressing its uptake but promoting its assimilation	39
Low phosphorus promotes NSP1–NSP2 heterodimerization to enhance strigolactone biosynthesis and regulate shoot and root architecture in rice	39
Gapless indica rice genome reveals synergistic contributions of active transposable elements and segmental duplications to rice genome evolution	39
Genetic and molecular exploration of maize environmental stress resilience: Toward sustainable agriculture	38
Verticillium dahliae secretory effector PevD1 induces leaf senescence by promoting ORE1-mediated ethylene biosynthesis	38
Activation of stress-response genes by retrograde signaling-mediated destabilization of nuclear importin IMPα-9 and its interactor TPR2	38
Specialized metabolites as versatile tools in shaping plant–microbe associations	38

Strigolactone-gibberellin crosstalk mediated by a distant silencer fine-tunes plant height in upland cotton	38
Conserved and differentiated functions of CIK receptor kinases in modulating stem cell signaling in Arabidopsis	38
Unraveling the sorghum domestication	37
Nitrate signaling: A translator between nitrate perception and calcium signaling	37
GEFormer: A genotype-environment interaction-based genomic prediction method that integrates the gating multilayer perceptron and linear attention mechanisms	37
The winners of Rising Stars in Plant Sciences 2024	37
NAC1 goes TOPLESS to manage cortex proliferation	36
Nitrogen–iron interaction as an emerging factor influencing crop productivity and nutrient use efficiency	36
Plant virus–derived siRNAs “turn on” broad-spectrum plant immunity in wheat	36
Underwater survival: Calcium signaling keeps plants afloat	36
Distinctive and complementary roles of E2F transcription factors during plant replication stress responses	36
Cells know how big they are	36
Protein phase separation of plant nuclear pore complex	36
A telomere-to-telomere genome assembly of the cultivated peanut	35
Breaking the spatial restriction of pluripotency acquisition by environmental stimuli	35
From the T2T cotton genome to a tripartite regulatory module governing embryo folding	35
Botanical timekeepers: Deciphering evolutionary relationships in plants	35
Control of H2S synthesis by the monomer–oligomer transition of OsCBSX3 for modulating rice growth-immunity balance	34
A molecular framework underlying low-nitrogen-induced early leaf senescence in Arabidopsis thaliana	34
Heat stress-induced decapping of WUSCHEL mRNA enhances stem cell thermotolerance in Arabidopsis	34
Perenniality: From model plants to applications in agriculture	34
Rewilding staple crops for the lost halophytism: Toward sustainability and profitability of agricultural production systems	33
Genome sequences of five Sitopsis species of Aegilops and the origin of polyploid wheat B subgenome	33
Insects manipulate plant immunity via a cross-kingdom small RNA effector	33
The RALF1-FERONIA complex interacts with and activates TOR signaling in response to low nutrients	33
Regulation of jasmonate signaling by reversible acetylation of TOPLESS in Arabidopsis	33
Three functionally redundant plant-specific paralogs are core subunits of the SAGA histone acetyltransferase complex in Arabidopsis	33
The BCM1-EGY1 module balances chlorophyll biosynthesis and breakdown to confer chlorophyll homeostasis in land plants	33
MicroProteins: Expanding functions and novel modes of regulation	32
Polycomb and trithorax: Their yin-yang dynamics in plants	32
SoyOmics: A deeply integrated database on soybean multi-omics	32
A karyopherin constrains nuclear activity of the NLR protein SNC1 and is essential to prevent autoimmunity in Arabidopsis	32
A war on the cell wall	32
A step forward in breeding for ratooning ability in rice	32
Mobilizing Triticeae diversity from gene banks to farmer’s field	32
Epitranscriptome engineering in crop improvement	32
Epigenetic reprogramming by glucose-TOR signaling controls plant development	32
Toward the next step to the New Green Revolution	32
SUMOylation-modified Pelota-Hbs1 RNA surveillance complex restricts the infection of potyvirids in plants	32
CIK receptor kinases in root meristem	32
A complete reference genome assembly for foxtail millet and Setaria-db, a comprehensive database for Setaria	31
Stomatal regulation: Role of H2S-induced persulfidation in ABA signaling	31
(Not) an elementary question: How to mobilize the iron in the wall?	31
Cell-type-specific transcriptomics reveals that root hairs and endodermal barriers play important roles in beneficial plant-rhizobacterium interactions	31
Why 2022 is a revolutionary year for potato genomics	30
Methylesterification of cell-wall pectin controls the diurnal flower-opening times in rice	30
A SPX domain vacuolar transporter links phosphate sensing to homeostasis in Arabidopsis	30
Lack of ethylene does not affect reproductive success and synergid cell death in Arabidopsis	30
Chloroplast state transitions modulate nuclear genome stability via cytokinin signaling in Arabidopsis	30
RIN enhances plant disease resistance via root exudate-mediated assembly of disease-suppressive rhizosphere microbiota	30
Comparative genomic and transcriptomic analyses uncover the molecular basis of high nitrogen-use efficiency in the wheat cultivar Kenong 9204	30
The ferroxidases LPR1 and LPR2 control iron translocation in the xylem of Arabidopsis plants	30
Arabidopsis WRKY1 promotes monocarpic senescence by integrative regulation of flowering, leaf senescence, and nitrogen remobilization	30
Genetic insights into adaptation of alfalfa	29
Improving rice photosynthesis and yield through trehalose 6-phosphate signaling	29
Increasing seed lint fiber density for promoting cotton yield: Opportunities and challenges	29
An unprecedented one-arrow-two-hawks strategy achieves high yield with early flowering in rice	28
Creating one-line hybrid crops by synthetic apomixis	28
The tip of the iceberg: ROP2 directly interacts with SYP121 to regulate root-hair polarization, elongation, and exocytosis	28
A circular single-stranded DNA mycovirus infects plants and confers broad-spectrum fungal resistance	28
A gap-free complete genome assembly of oat and OatOmics, a multi-omics database	27
Plant PAQR-like sensors activate heterotrimeric G proteins to confer resistance against multiple pathogens	27
Cherish your weeds	27
RLKdb: A comprehensively curated database of plant receptor-like kinase families	27
DNA damage: Driver of methylome reshaping?	27
Legume-specific SnRK1 promotes malate supply to bacteroids for symbiotic nitrogen fixation	27
Improving the haploidization toolbox: Maternal factors take the stage	26
A highly efficient and environmentally friendly strategy to obtain transgene-free genome-edited progeny in flowering plants	26
Moving magnesium	26
Cytokinin signaling connects the chloroplast function with nuclear genome stability	26
Genomic, transcriptomic, and metabolomic analyses reveal convergent evolution of oxime biosynthesis in Darwin’s orchid	26
High-temperature wheat leaf rust resistance gene Lr13 exhibits pleiotropic effects on hybrid necrosis	26
Arsenite provides a selective signal that coordinates arsenate uptake and detoxification through the regulation of PHR1 stability in Arabidopsis	25
Overproduction of OsRACK1A, an effector-targeted scaffold protein promoting OsRBOHB-mediated ROS production, confers rice floral resistance to false smut disease without yield penalty	25
Cellulose synthesis in land plants	25
Smart breeding driven by big data, artificial intelligence, and integrated genomic-enviromic prediction	25
Inferring the genome-wide history of grasses	25
A useful toolbox for the detection of SCF E3 ligase activity	25
The genome of the recretohalophyte Limonium bicolor provides insights into salt gland development and salinity adaptation during terrestrial evolution	25
Phosphorus lights up the trade-off between growth and immunity	24
Sensing H2O2 for defense in plants	24
Speed vernalization to accelerate generation advance in winter cereal crops	24
Launching, perceiving, and diminishing of airborne signals	24
Phosphoinositides: Emerging players in plant salinity stress tolerance	24
Graph-based pangenome provides insights into structural variations and genetic basis of metabolic traits in potato	24
COG1 – A master transcription factor regulating photosynthesis	24
Sailing in complex nutrient signaling networks: Where I am, where to go, and how to go?	24
Dt1 inhibits SWEET-mediated sucrose transport to regulate photoperiod-dependent seed weight in soybean	24
Phased, chromosome-scale genome assemblies of tetraploid potato reveal a complex genome, transcriptome, and predicted proteome landscape underpinning genetic diversity	23
The long non-coding RNA CARMA directs sucrose-responsive osmoregulation	23
A direct link between BR and SA signaling: Negative regulation of TGA4 by BIN2	23
Breaking the biotrophic interfacial complex: How genome editing can lead to rice blast resistance	23
The molecular basis of heat stress responses in plants	23
On breakthroughs and limits: Resolving structural fine-tuning of photosynthetic supercomplexes	23
Roots dOdge streSs	23