Journal of Genetics and Genomics

Article	Citations
AMPK controls sucrose taste sensitization in Drosophila	602
Key divisions and cell specification during embryo pattern formation require SMU1-mediated splicing of CAK genes in Arabidopsis	177
RCAN family member 3 deficiency contributes to noncompaction of the ventricular myocardium	160
Near-complete de novo genome assemblies of tomato (Solanum lycopersicum) determinate cultivars Micro-Tom and M82	113
Genome of aerial alga Trentepohlia odorata reveals insights into the evolution of terrestrial lifestyle in green algae	98
The ZFP541-KCTD19 complex is essential for pachytene progression by activating meiotic genes during mouse spermatogenesis	85
Plant-based native electrophoretic shift immunoassay (PN-ESI) enables semi-in vivo detection of native protein-DNA interactions	81
High-quality genome of Firmiana hainanensis provides insights into the evolution of Malvaceae subfamilies and the mechanism of their wood density formation	74
Active DNA demethylation regulates MAMP-triggered immune priming in Arabidopsis	72
Construction of a high-quality indexed EMS mutant library and a pipeline for identifying causal mutations in wheat by whole-exome sequencing	67
Local trafficking and long-distance transport of small RNAs in plants	59
Metabolome-based genome-wide association study provides genetic insights into the andrographolide accumulation in Andrographis paniculata	59
Ectopic expression of Myomaker and Myomixer in slow muscle cells induces slow muscle fusion and myofiber death	58
Bmelo12, an elongase of very long-chain fatty acids gene, regulates silk yield in Bombyx mori	57
Molecular cytogenetic map visualizes the heterozygotic genome and identifies translocation chromosomes in Citrus sinensis	55
Gap-free genome assembly and metabolomics analysis of common bean provide insights into genomic characteristics and metabolic determinants of seed coat pigmentation	55
TMEM63B regulates postnatal development of cochlear sensory epithelia via thyroid hormone signaling	54
The CXCR4-CXCL12 axis promotes T cell reconstitution via efficient hematopoietic immigration	54
ERVcancer: a web resource designed for querying activation of human endogenous retroviruses across major cancer types	53
Infection of SARS-CoV-2 causes severe pathological changes in mouse testis	51
Erratum to “GenomeSyn: a bioinformatics tool for visualizing genome synteny and structural variations” [J. Genet. Genom. (2022) 49, 1174–1176]	49
Building a cattle pan-genome using more de novo assemblies	49
Gene therapy and gene editing strategies in inherited blood disorders	45
Ancestral genome reconstruction and the evolution of chromosomal rearrangements in Triticeae	45
Deciphering the influence of gut and oral microbiomes on menopause for healthy aging	41

An LRR-RLK protein modulates drought- and salt-stress responses in maize	41
CliPME: The clinical pathogenic bacteria mutation and expression database	39
Neutrophils disrupt the intestinal barrier via IL-22/TGF-β/Mmp9 axis in the zebrafish model of inflammatory bowel disease	39
FAK activation drives non-genetic adaptive survival of ALK-rearranged lung cancer under tyrosine kinase inhibitor treatment	39
Rapid and robust sex determination from ancient enamel proteomes using protSexInferer	38
Multi-omics identification and verification of Dnajb14 as a modulator of retinal ganglion cell survival in glaucoma through ferroptosis	38
VSOLassoBag: a variable-selection oriented LASSO bagging algorithm for biomarker discovery in omic-based translational research	36
Identification of QTL-by-environment interaction by controlling polygenic background effect	36
The Magnaporthe oryzae effector MoCHT1 targets and stabilizes rice OsLLB to suppress jasmonic acid synthesis and enhance infection	36
ccdc141 is required for left-right axis development by regulating cilia formation in the Kupffer's vesicle of zebrafish	35
Genetic structure and domestication footprints of the tusk, coat color, and ear morphology in East Chinese pigs	35
3D landscape reorganization in response to feeding preferences adaptation in the youngest split Gymnocypris fish	34
Unveiling cell-type-specific mode of evolution in comparative single-cell expression data	34
Activation of γ-globin expression by a common variant disrupting IKAROS-binding motif in β-thalassemia	33
The right is more conservative than the left: a postnatal hypothesis of handedness based on mice	33
NCAD v1.0: a database for non-coding variant annotation and interpretation	32
VdMKK1-mediated cell wall integrity is essential for virulence in vascular wilt pathogen Verticillium dahliae	32
Understanding the mechanistic regulation of ferroptosis in cancer: the gene matters	31
Corrigendum to “AMPK controls sucrose taste sensitization in Drosophila” [Journal of Genetics and Genomics (2023) 50, 50–53]	31
Erratum to “Deep insights and clinical benefits from the comprehensive cohort of fetal skeletal dysplasia in China”[Journal of Genetics and Genomics 52 (2025) 1524–1536]	30
Capn3b-deficient zebrafish model reveals a key role of autoimmune response in LGMDR1	30
Znf706 regulates germ plasm assembly and primordial germ cell development in zebrafish	30
ZFP151 enhances drought tolerance in rice through direct activation of NCED4 expression	29
Incomplete penetrance in neurogenetic disorders: current insights and emerging perspectives	29
Cohesin variants associated with human reproductive and developmental disorders	27
Haplotype-resolved methylation profiling across three generations reveals principles of human epigenetic inheritance	27
A critical evaluation of deep-learning based phylogenetic inference programs using simulated datasets	27
Natural history and phenotype–genotype correlations in GJB2-related hearing loss: a systematic and comprehensive review	26
A human-specific cytotoxic neopeptide generated by the deafness gene Cingulin	26
Variation in the promoter of OsNPF7.1 contributes to nitrate uptake, remobilization, and grain yield in upland rice	26
Triticeae-BGC: a web-based platform for detecting, annotating and evolutionary analysis of biosynthetic gene clusters in Triticeae	24
microRNA-2184 orchestrates Mauthner-cell axon regeneration in zebrafish via syt3 modulation	24
Absence of Serpinb6a causes progressive hair cell apoptosis and hearing loss in mice	24
CancerSRT: a spatially resolved transcriptomics database for human cancers	24
Thyroid-stimulating hormone-thyroid hormone signaling contributes to circadian regulation through repressing clock2/npas2 in zebrafish	23
MEI4 variations drive female reproductive disorders via impaired oocyte abundance and developmental potential	23
Natural variation of CT2 affects the embryo/kernel weight ratio in maize	23
Fli1 acts in parallel with Pu.1 to control macrophage and neutrophil fate in zebrafish	23
Characterizing structural variants based on graph-genotyping provides insights into pig domestication and local adaption	22
Multidisciplinary exploration of ancient atherosclerosis: Paleo-genomic and paleo-nutritional analysis of a 13th century artificial mummy in China	22
Epigenetic variation in maize agronomical traits for breeding and trait improvement	22
Nitrogen inhibition of nitrogenase activity involves the modulation of cytosolic invertase in soybean nodule	21
Genetic regulatory landscape of gene expression during leaf and stem development in common tobacco	21
Integration of light, carbon, and nitrogen pathways in regulating rice yield	21
Coordinated regulation of cortical astrocyte maturation by OLIG1 and OLIG2 through BMP7 signaling modulation	20
Transcription factors BnaC09.FUL and BnaC06.WIP2 antagonistically regulate flowering time under long-day conditions in Brassica napus	20
Migration and proliferation of ductal cells promote pancreatic repair after trauma	19
Stomatal maturomics: hunting genes regulating guard cell maturation and function formation from single-cell transcriptomes	19
Homozygous nonsense variants of KCTD19 cause male infertility in humans and mice	19
Constructing the metabolic network of wheat kernels based on structure-guided chemical modification and multi-omics data	19

Reconstructing cell lineage trees with genomic barcoding: approaches and applications	19
Diverse functions of sex determination gene doublesex on sexually dimorphic neuronal development and behaviors	18
The HPCA1–VDAC3 module mediates the humidity adaptation trade-off by interfering with ROS homeostasis in Arabidopsis thaliana	18
Single-cell RNA-Seq reveals transcriptional regulatory networks directing the development of mouse maxillary prominence	18
Centromere architecture and sex chromosome evolution in garden asparagus revealed by a gap-free haplotype-resolved genome	18
Fulminant myocarditis induced by SARS-CoV-2 infection without severe lung involvement: insights into COVID-19 pathogenesis	18
Biallelic MED16 variants disrupt neural development and lead to an intellectual disability syndrome	17
Two ABCI family transporters, OsABCI15 and OsABCI16, are involved in grain-filling in rice	17
Development of a haploid inducer by editing HvMTL in barley	17
IMAGGS: a radiogenomic framework for identifying multi-way associations in breast cancer subtypes	17
Mammary stem cells: from molecular cues to orchestrated regulatory mechanisms and its implications in breast cancer	17
The application and prospects of spatial omics technologies in clinical medical research and molecular diagnostics	17
A gain-of-function variant in RICTOR predisposes to human obesity	17
Identification of FUT7 hypomethylation as the blood biomarker in the prediction of early-stage lung cancer	17
Phenotypic advantages and improved genomic stability following selection in advanced selfing-generations of Brassica allohexaploids	16
The transcription factor SlDOF9 directly activates SlELP5 expression to regulate inflorescence length in tomato	16
Design strategies for enhanced sustainable green revolution productivity in rice	16
The power of “controllers”: Transposon-mediated duplicated genes evolve towards neofunctionalization	16
Synchronized lineage tracing of cell membranes and nuclei by dual recombinases and dual fluorescent	16
A non-canonical bipartite NLS dictates nuclear import and function of the Drosophila Pc protein	16
Membrane depolarization drives tumor-suppressive cell competition via hedgehog signaling activation	16
Genomic sequencing as a key primary recommendation for neonatal hyperbilirubinemia: a population-based multicenter study	16
Integrative multi-omics and genomic prediction reveal genetic basis of salt tolerance in alfalfa	16
Advances in monogenic female infertility	16
Genomic insights into the genetic diversity, lateral gaits and high-altitude adaptation of Chakouyi (CKY) horses	15
Protein post-translational modifications in auxin signaling	15
Genetic landscape of hereditary cardiomyopathies and arrhythmias in China	15
Dissecting the functional roles of CTCF and CTCF-s in human embryonic stem cells	15
Both gain- and loss-of-function variants of KCNA1 are associated with paroxysmal kinesigenic dyskinesia	15
A single-nucleus transcriptome atlas of soybean anthers	15
Root-derived long-distance signals trigger ABA synthesis and enhance drought resistance in Arabidopsis	15
AtPQT11, a P450 enzyme, detoxifies paraquat via N-demethylation	15
Two diversities meet in the rhizosphere: root specialized metabolites and microbiome	14
Genetic innovations underlying the evolution of root nodule symbiosis in Leguminosae	14
Recapitulation of key phenotypes and pathological features of primary familial brain calcification (PFBC) in a mouse Slc20a2S602W/S602W model	14
Ancient mitochondrial genome depicts sheep maternal dispersal and migration in Eastern Asia	14
Dosage effect genes modulate grain development in synthesized Triticum durum-Haynaldia villosa allohexaploid	14
Rare variants in FANCJ induce premature ovarian insufficiency in humans and mice	14
Lipid metabolism and metabolites: emerging roles in systemic physiology and metabolic diseases	14
The mechanistic insights into fruit ripening: integrating phytohormones, transcription factors, and epigenetic modification	14
hfCas12Max-mediated targeted integration at accessible chromatin regions with a goat-derived UCOE enhances stable recombinant lactoferrin expression	14
GeMemiOM: the curated database on genes, putative methylation study targets, and microRNA targets for otitis media	14
Understanding and enhancing rice resistance to false smut disease	13
Combining single-cell profiling and functional analysis explores the role of pseudogenes in human early embryonic development	13
Addition of the T5 exonuclease increases the prime editing efficiency in plants	13
Bi-allelic GSPT1 variants are associated with a syndromic neurodevelopmental disorder characterized by intellectual disability and microcephaly	13
CCDC181 is required for proper spermiogenesis in mice	13
Corrigendum to “Root-derived long-distance signals trigger ABA synthesis and enhance drought resistance in Arabidopsis” [Journal of Genetics and Genomics (2024) 51, 749–761]	13
Synergy of gut microbiota and host genome in driving heterosis expression of chickens	13
Genetic basis of geographical differentiation, breeding selection, domestication effects, and breeding application for TaJAZ1 in wheat	13
S-sulfenylation-mediated inhibition of the GSNOR1 activity regulates ovule development in Arabidopsis	13
VT3D: a visualization toolbox for 3D transcriptomic data	13
Whole-genome sequencing reveals selection signals among Chinese, Pakistani, and Nepalese goats	13
circRNAs derived from a nuclear hormone receptor act differentially on insect metamorphosis and reproduction	13
OsbZIP27 coordinates with OsHUB1 and OsHUB2 to modulate drought tolerance in rice	13
An elite haplotype of the glutamine synthetase gene TaGS1.1-6A is associated with increased nitrogen use- and yield-related traits in wheat	13
Corrigendum to “Biogenesis of autophagosomes from the ERGIC membrane system” [Journal of Genetics and Genomics (2023) 50, 3–6]	12
To see and to know: the power of live imaging in illuminating and decoding biological complexity	12
The local density of H3K9me3 dictates the stability of HP1α condensates-mediated genomic interactions	12
DPB3 and DPB4 proteins regulate Medicago flowering and leaf anthocyanin biosynthesis	12
ADGAP: a user-friendly online ancient DNA database and genome analysis platform	12
Translation machinery: the basis of translational control	12
Probiotic potential of Parabacteroides johnsonii in mitigating age-related ovarian functional decline	12
Localized production of LECT2 by orthotopic histiocytes during inflammation	12
Nutritional geometry framework of sucrose taste in Drosophila	12
Engineering a transport-facilitating molecular module to improve seed-setting rate and yield in rice	12
Loss of lims1 causes aberrant cardiac remodeling and heart failure via activating gp130/Jak1/Stat3 pathway in zebrafish	12
Toll-9 prevents the proliferation of injected oncogenic cells in adult flies	11
O-GlcNAcylation regulates phagocytosis by promoting Ezrin localization at the cell cortex	11
Deciphering the evolution and complexity of wheat germplasm from a genomic perspective	11
Microbiota-mediated shaping of mouse spleen structure and immune function characterized by scRNA-seq and Stereo-seq	11
A multi-ancestry GWAS meta-analysis of facial features and its application in predicting archaic human features	11
Current therapies for osteoarthritis and prospects of CRISPR-based genome, epigenome, and RNA editing in osteoarthritis treatment	11
Genetic and molecular mechanisms of phytohormone-mediated seed size control in crops	11
COL: a method for identifying putatively functional circular RNAs	10
Genome-wide analysis of Q binding reveals a regulatory network that coordinates wheat grain yield and grain protein content	10
The interplay between extracellular and intracellular auxin signaling in plants	10
Characterization of heavy-chain antibody gene repertoires in Bactrian camels	10
TabHLH95-TaNF-YB1 module promotes grain starch synthesis in bread wheat	10
Laser capture microdissection for biomedical research: towards high-throughput, multi-omics, and single-cell resolution	10

Crop root system architecture in drought response	10
Deep insights and clinical benefits from the comprehensive cohort of fetal skeletal dysplasia in China	10
The shikimate pathway regulates programmed cell death	10
The ARHGAP10-202aa protein encoded by circARHGAP10 promotes skeletal muscle development and regeneration	10
Epigenetic control of plant abiotic stress responses	10
High-quality genome assembly of Carex capillifolia reveals genetic adaptations to drought stress in the Qinghai-Xizang plateau	10
Cdx1b protects intestinal cell fate by repressing signaling networks for liver specification	10
A high-quality genome assembly delineates the genetic basis of freezing tolerance in the elite wheat cultivar Jimai 22	10
The development and application of deep learning for stem cell research	10
Long-read sequencing and de novo assembly of the cynomolgus macaque genome	10
Ccdc57 is required for straightening the body axis by regulating ciliary motility in the brain ventricle of zebrafish	10
TMEM63B channel is the mechanosensor in alveolar epithelial type II cells	10
m6A hypomethylation assembles a fibrogenic TCF7L2–Smad2/3 complex in pterygium	10
Mov10 mitigates hematopoietic stem cell exhaustion under stress by modulating the Camp-mediated inflammatory pathway	10
Pathogenic TDRD12 variants cause defective piRNA pathway and male infertility in humans and mice	10
LRRC71 stabilizes SEPT4 protein to ensure sperm annulus integrity and male fertility	10
Genome-wide profiling of polymorphic short tandem repeats and their influence on gene expression and trait variation in diverse rice populations	9
Genomic allele-specific base editing with imperfect gRNA	9
Systematic identification and screening of functional long noncoding RNAs during planarian regeneration	9
TMEM39A and TMEM131 facilitate bulk transport of ECM proteins through large COPII vesicle formation	9
TAZ inhibits SCLC metastasis through GALNT18-mediated O-glycosylation	9
Harness the wild: progress and perspectives in wheat genetic improvement	9
Wide hybridizations reveal the robustness of functional centromeres in Triticum–Aegilops species complex lines	9
A tunable genome editing system of the prime editor mediated by dihydrofolate reductase	9
Near-gapless telomere-to-telomere reference nuclear genome and variable mitochondrial genome of Amborella trichopoda	9
Genome-wide association analysis reveals regulatory genes for the metabolite synthesis of 2-acetyl-1-pyrroline in aromatic coconut (Cocos nucifera L.)	9
The lawc gene emerged de novo from conserved genomic elements and acquired a broad expression pattern in Drosophila	9
Genome-wide association study of HBV-related hepatocellular carcinoma identifies a functional variant at the FAM114A1 locus	9
Viral receptor profiles of masked palm civet revealed by single-cell transcriptomics	9
Whole-genome sequence-based association study for immune cells in an eight-breed pig heterogeneous population	9
Phosphorylation of ATF2 promotes odontoblastic differentiation via intrinsic HAT activity	9
Overexpression of CRYPTOCHROME 2 enhances shoot growth and wood formation in poplar under growth-restrictive short days	9
Genetic and molecular mechanisms of reproductive isolation in the utilization of heterosis for breeding hybrid rice	9