Journal of Genetics and Genomics

Papers
(The TQCC of Journal of Genetics and Genomics is 8. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)
ArticleCitations
The ZFP541-KCTD19 complex is essential for pachytene progression by activating meiotic genes during mouse spermatogenesis260
AMPK controls sucrose taste sensitization in Drosophila226
Near-complete de novo genome assemblies of tomato (Solanum lycopersicum) determinate cultivars Micro-Tom and M82223
High-quality genome of Firmiana hainanensis provides insights into the evolution of Malvaceae subfamilies and the mechanism of their wood density formation195
RCAN family member 3 deficiency contributes to noncompaction of the ventricular myocardium170
Functional analysis of the emerging roles for the KISS1/KISS1R signaling pathway in cancer metastasis139
Local trafficking and long-distance transport of small RNAs in plants132
RNA-binding motif protein RBM47 promotes tumorigenesis in nasopharyngeal carcinoma through multiple pathways86
Maternal genetic history of southern East Asians over the past 12,000 years80
Active DNA demethylation regulates MAMP-triggered immune priming in Arabidopsis62
Finding unknown species in the genomes of extant species53
Hd1, Ghd7, and DTH8 synergistically determine the rice heading date and yield-related agronomic traits53
Single-cell transcriptome atlas of the leaf and root of rice seedlings51
Ancestral genome reconstruction and the evolution of chromosomal rearrangements in Triticeae50
Von Hippel-Lindau tumor suppressor pathways & corresponding therapeutics in kidney cancer46
The S100 calcium binding protein A11 promotes liver fibrogenesis by targeting TGF-β signaling44
Building a cattle pan-genome using more de novo assemblies39
ERVcancer: a web resource designed for querying activation of human endogenous retroviruses across major cancer types38
TMEM63B regulates postnatal development of cochlear sensory epithelia via thyroid hormone signaling38
Ether phospholipids govern ferroptosis36
Molecular cytogenetic map visualizes the heterozygotic genome and identifies translocation chromosomes in Citrus sinensis36
OsLTP47 may function in a lipid transfer relay essential for pollen wall development in rice36
Gene therapy and gene editing strategies in inherited blood disorders36
The CXCR4-CXCL12 axis promotes T cell reconstitution via efficient hematopoietic immigration36
Erratum to “GenomeSyn: A bioinformatics tool for visualizing genome synteny and structural variations” [J. Genet. Genom. 49 (2022) 1174–1176]35
Ectopic expression of Myomaker and Myomixer in slow muscle cells induces slow muscle fusion and myofiber death34
The composition, function, and regulation of adipose stem and progenitor cells33
Infection of SARS-CoV-2 causes severe pathological changes in mouse testis33
Immu-Mela: An open resource for exploring immunotherapy-related multidimensional genomic profiles in melanoma32
Bmelo12, an elongase of very long-chain fatty acids gene, regulates silk yield in Bombyx mori32
The transcription factor Sox30 is involved in Nile tilapia spermatogenesis31
An LRR-RLK protein modulates drought- and salt-stress responses in maize31
Gap-free genome assembly and metabolomics analysis of common bean provide insights into genomic characteristics and metabolic determinants of seed coat pigmentation29
Neutrophils disrupt the intestinal barrier via IL-22/TGF-β/Mmp9 axis in the zebrafish model of inflammatory bowel disease29
Aberrant nuclear lamina contributes to the malignancy of human gliomas29
A mesenchymal-like subpopulation in non-neuroendocrine SCLC contributes to metastasis28
Corrigendum to “AMPK controls sucrose taste sensitization in Drosophila” [Journal of Genetics and Genomics (2023) 50, 50–53]26
Deciphering the influence of gut and oral microbiomes on menopause for healthy aging26
Understanding the mechanistic regulation of ferroptosis in cancer: the gene matters25
3D landscape reorganization in response to feeding preferences adaptation in the youngest split Gymnocypris fish25
Identification of QTL-by-environment interaction by controlling polygenic background effect25
Altered gut microbiome in FUT2 loss-of-function mutants in support of personalized medicine for inflammatory bowel diseases25
NCAD v1.0: a database for non-coding variant annotation and interpretation25
Genetic structure and domestication footprints of the tusk, coat color, and ear morphology in East Chinese pigs25
Activation of γ-globin expression by a common variant disrupting IKAROS-binding motif in β-thalassemia24
Capn3b-deficient zebrafish model reveals a key role of autoimmune response in LGMDR123
A critical evaluation of deep-learning based phylogenetic inference programs using simulated datasets22
VdMKK1-mediated cell wall integrity is essential for virulence in vascular wilt pathogen Verticillium dahliae22
Znf706 regulates germ plasm assembly and primordial germ cell development in zebrafish22
The genetic control of glabrous glume during African rice domestication22
The advancements, challenges, and future implications of the CRISPR/Cas9 system in swine research22
ccdc141 is required for left-right axis development by regulating cilia formation in the Kupffer's vesicle of zebrafish22
Triticeae-BGC: a web-based platform for detecting, annotating and evolutionary analysis of biosynthetic gene clusters in Triticeae21
Absence of Serpinb6a causes progressive hair cell apoptosis and hearing loss in mice21
CancerSRT: a spatially resolved transcriptomics database for human cancers21
Sequence motifs and prediction model of GBE editing outcomes based on target library analysis and machine learning21
Fli1 acts in parallel with Pu.1 to control macrophage and neutrophil fate in zebrafish21
Epigenetic variation in maize agronomical traits for breeding and trait improvement21
VSOLassoBag: a variable-selection oriented LASSO bagging algorithm for biomarker discovery in omic-based translational research21
BAP60 plays an opposite role to the MRT-NURF complex in regulating lipid droplet size21
Natural variation of CT2 affects the embryo/kernel weight ratio in maize21
Coordinated regulation of cortical astrocyte maturation by OLIG1 and OLIG2 through BMP7 signaling modulation20
Characterizing structural variants based on graph-genotyping provides insights into pig domestication and local adaption20
Variation in the promoter of OsNPF7.1 contributes to nitrate uptake, remobilization, and grain yield in upland rice20
Nitrogen inhibition of nitrogenase activity involves the modulation of cytosolic invertase in soybean nodule20
A human-specific cytotoxic neopeptide generated by the deafness gene Cingulin20
microRNA-2184 orchestrates Mauthner-cell axon regeneration in zebrafish via syt3 modulation19
Migration and proliferation of ductal cells promote pancreatic repair after trauma19
Exome sequencing reveals genetic architecture in patients with isolated or syndromic short stature19
Fulminant myocarditis induced by SARS-CoV-2 infection without severe lung involvement: insights into COVID-19 pathogenesis19
Transcription factors BnaC09.FUL and BnaC06.WIP2 antagonistically regulate flowering time under long-day conditions in Brassica napus19
Thyroid-stimulating hormone-thyroid hormone signaling contributes to circadian regulation through repressing clock2/npas2 in zebrafish19
Single-cell RNA-Seq reveals transcriptional regulatory networks directing the development of mouse maxillary prominence18
Diverse functions of sex determination gene doublesex on sexually dimorphic neuronal development and behaviors18
Stomatal maturomics: hunting genes regulating guard cell maturation and function formation from single-cell transcriptomes18
Polycomb-group proteins in the initiation and progression of cancer18
Homozygous nonsense variants of KCTD19 cause male infertility in humans and mice18
Biallelic MED16 variants disrupt neural development and lead to an intellectual disability syndrome18
CDCP: a visualization and analyzing platform for single-cell datasets18
Two ABCI family transporters, OsABCI15 and OsABCI16, are involved in grain-filling in rice18
Constructing the metabolic network of wheat kernels based on structure-guided chemical modification and multi-omics data18
TaxonKit: A practical and efficient NCBI taxonomy toolkit17
GRB10 regulates β-cell mass by inhibiting β-cell proliferation and stimulating β-cell dedifferentiation17
Development of a haploid inducer by editing HvMTL in barley17
IMAGGS: a radiogenomic framework for identifying multi-way associations in breast cancer subtypes17
Identification of FUT7 hypomethylation as the blood biomarker in the prediction of early-stage lung cancer17
Reconstructing cell lineage trees with genomic barcoding: approaches and applications17
Synchronized lineage tracing of cell membranes and nuclei by dual recombinases and dual fluorescent17
Chemical screening reveals Ronidazole is a superior prodrug to Metronidazole for nitroreductase-induced cell ablation system in zebrafish larvae16
Phylogeny and sex chromosome evolution of Palaeognathae16
Root-derived long-distance signals trigger ABA synthesis and enhance drought resistance in Arabidopsis16
Genetics of anorexia nervosa: An overview of genome-wide association studies and emerging biological links16
The power of “controllers”: Transposon-mediated duplicated genes evolve towards neofunctionalization16
A gain-of-function variant in RICTOR predisposes to human obesity16
Nitrogen assimilation in plants: current status and future prospects16
Phenotypic advantages and improved genomic stability following selection in advanced selfing-generations of Brassica allohexaploids16
Mammary stem cells: molecular cues, orchestrated regulatory mechanisms and its implications in breast cancer16
Characteristics of TP53 germline variants and their correlations with Li-Fraumeni syndrome or Li-Fraumeni-like syndrome in Chinese tumor patients16
The HuaBiao project: whole-exome sequencing of 5000 Han Chinese individuals15
Both gain- and loss-of-function variants of KCNA1 are associated with paroxysmal kinesigenic dyskinesia15
Mycobacterium Lrp/AsnC family transcriptional factor modulates the arginase pathway as both a sensor and a transcriptional repressor15
An efficient metatranscriptomic approach for capturing RNA virome and its application to SARS-CoV-215
Genomic insights into the genetic diversity, lateral gaits and high-altitude adaptation of Chakouyi (CKY) horses15
Micro-coevolution of host genetics with gut microbiome in three Chinese ethnic groups15
Ancient mitochondrial genome depicts sheep maternal dispersal and migration in Eastern Asia15
Comparative study of gut microbiota from captive and confiscated-rescued wild pangolins14
The camphor tree genome enhances the understanding of magnoliid evolution14
AtPQT11, a P450 enzyme, detoxifies paraquat via N-demethylation14
Protein post-translational modifications in auxin signaling14
Synergy of gut microbiota and host genome in driving heterosis expression of chickens13
Genetic basis of geographical differentiation, breeding selection, domestication effects, and breeding application for TaJAZ1 in wheat13
ROS is essential for initiation of energy deprivation-induced autophagy13
Combining single-cell profiling and functional analysis explores the role of pseudogenes in human early embryonic development13
Rare variants in FANCJ induce premature ovarian insufficiency in humans and mice13
OsbZIP27 coordinates with OsHUB1 and OsHUB2 to modulate drought tolerance in rice13
Mesenteric lymph system constitutes the second route in gut–liver axis and transports metabolism-modulating gut microbial metabolites13
S-sulfenylation-mediated inhibition of the GSNOR1 activity regulates ovule development in Arabidopsis13
GeMemiOM: the curated database on genes, putative methylation study targets, and microRNA targets for otitis media13
Corrigendum to “Root-derived long-distance signals trigger ABA synthesis and enhance drought resistance in Arabidopsis” [Journal of Genetics and Genomics (2024) 51, 749–761]13
CCDC181 is required for proper spermiogenesis in mice13
Two diversities meet in the rhizosphere: root specialized metabolites and microbiome13
Whole-genome sequencing reveals selection signals among Chinese, Pakistani, and Nepalese goats13
LIMK2 is required for membrane cytoskeleton reorganization of contracting airway smooth muscle13
Understanding and enhancing rice resistance to false smut disease12
Addition of the T5 exonuclease increases the prime editing efficiency in plants12
Dosage effect genes modulate grain development in synthesized Triticum durum-Haynaldia villosa allohexaploid12
DPB3 and DPB4 proteins regulate Medicago flowering and leaf anthocyanin biosynthesis11
Genome-wide analysis of Q binding reveals a regulatory network that coordinates wheat grain yield and grain protein content11
Delineating the longitudinal tumor evolution using organoid models11
A simple and precise method (Y2H-in-frame-seq) improves yeast two-hybrid screening with cDNA libraries11
Current therapies for osteoarthritis and prospects of CRISPR-based genome, epigenome, and RNA editing in osteoarthritis treatment11
Toll-9 prevents the proliferation of injected oncogenic cells in adult flies11
Corrigendum to “Biogenesis of autophagosomes from the ERGIC membrane system” [Journal of Genetics and Genomics (2023) 50, 3–6]11
Localized production of LECT2 by orthotopic histiocytes during inflammation11
Nutritional geometry framework of sucrose taste in Drosophila11
A hypothetical model of trans-acting R-loops-mediated promoter-enhancer interactions by Alu elements11
A multi-ancestry GWAS meta-analysis of facial features and its application in predicting archaic human features11
VT3D: a visualization toolbox for 3D transcriptomic data10
The interplay between extracellular and intracellular auxin signaling in plants10
Cdx1b protects intestinal cell fate by repressing signaling networks for liver specification10
Loss of lims1 causes aberrant cardiac remodeling and heart failure via activating gp130/Jak1/Stat3 pathway in zebrafish10
Translation machinery: the basis of translational control10
Genomic analyses reveal distinct genetic architectures and selective pressures in Chinese donkeys10
The local density of H3K9me3 dictates the stability of HP1α condensates-mediated genomic interactions10
Long-read sequencing and de novo assembly of the cynomolgus macaque genome10
O-GlcNAcylation regulates phagocytosis by promoting Ezrin localization at the cell cortex10
Deciphering the evolution and complexity of wheat germplasm from a genomic perspective10
Epigenetic control of plant abiotic stress responses10
Microbiota-mediated shaping of mouse spleen structure and immune function characterized by scRNA-seq and Stereo-seq10
Identification of novel loci influencing refractive error in East Asian populations using an extreme phenotype design9
TabHLH95-TaNF-YB1 module promotes grain starch synthesis in bread wheat9
Developmental regulation of neuronal gene expression by Elongator complex protein 1 dosage9
COL: a method for identifying putatively functional circular RNAs9
Characterization of heavy-chain antibody gene repertoires in Bactrian camels9
Pathogenic TDRD12 variants cause defective piRNA pathway and male infertility in humans and mice9
Ccdc57 is required for straightening the body axis by regulating ciliary motility in the brain ventricle of zebrafish9
The rice histone methylation regulates hub species of the root microbiota9
The shikimate pathway regulates programmed cell death9
Viral receptor profiles of masked palm civet revealed by single-cell transcriptomics8
Laser capture microdissection for biomedical research: towards high-throughput, multi-omics, and single-cell resolution8
TMEM39A and TMEM131 facilitate bulk transport of ECM proteins through large COPII vesicle formation8
Two zinc-finger proteins control the initiation and elongation of long stalk trichomes in tomato8
Decoding transcriptional regulation via a human gene expression predictor8
Newborn screening with targeted sequencing: a multicenter investigation and a pilot clinical study in China8
Overexpression of CRYPTOCHROME 2 enhances shoot growth and wood formation in poplar under growth-restrictive short days8
Wide hybridizations reveal the robustness of functional centromeres in Triticum–Aegilops species complex lines8
Crop root system architecture in drought response8
Retina cell atlases of multiple species and an online platform for retina cell-type markers8
Genetic and molecular mechanisms of reproductive isolation in the utilization of heterosis for breeding hybrid rice8
Genome-wide profiling of polymorphic short tandem repeats and their influence on gene expression and trait variation in diverse rice populations8
The landscape and clinical relevance of intronic polyadenylation in human cancers8
Genomic allele-specific base editing with imperfect gRNA8
Polyamine oxidase 3 is involved in salt tolerance at the germination stage in rice8
The lawc gene emerged de novo from conserved genomic elements and acquired a broad expression pattern in Drosophila8
PI3K/Akt/mTOR signaling orchestrates the phenotypic transition and chemo-resistance of small cell lung cancer8
New insights into the dispersion history and adaptive evolution of taxon Aegilops tauschii in China8
A tunable genome editing system of the prime editor mediated by dihydrofolate reductase8
Emerging roles of phosphoinositide-associated membrane trafficking in plant stress responses8
Phosphorylation of ATF2 promotes odontoblastic differentiation via intrinsic HAT activity8
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