Journal of Genetics and Genomics

Article	Citations
Plant-based native electrophoretic shift immunoassay (PN-ESI) enables semi-in-vivo detection of native protein-DNA interactions	518
Genome of aerial alga Trentepohlia odorata reveals insights into the evolution of terrestrial lifestyle in green algae	346
Metabolome-based genome-wide association study provides genetic insights into the andrographolide accumulation in Andrographis paniculata	156
High-quality genome of Firmiana hainanensis provides insights into the evolution of Malvaceae subfamilies and the mechanism of their wood density formation	147
AMPK controls sucrose taste sensitization in Drosophila	106
Key divisions and cell specification during embryo pattern formation require SMU1-mediated splicing of CAK genes in Arabidopsis	82
Active DNA demethylation regulates MAMP-triggered immune priming in Arabidopsis	79
Local trafficking and long-distance transport of small RNAs in plants	71
The ZFP541-KCTD19 complex is essential for pachytene progression by activating meiotic genes during mouse spermatogenesis	70
RCAN family member 3 deficiency contributes to noncompaction of the ventricular myocardium	64
Hd1, Ghd7, and DTH8 synergistically determine the rice heading date and yield-related agronomic traits	63
Near-complete de novo genome assemblies of tomato (Solanum lycopersicum) determinate cultivars Micro-Tom and M82	63
Gene therapy and gene editing strategies in inherited blood disorders	62
The transcription factor Sox30 is involved in Nile tilapia spermatogenesis	56
ERVcancer: a web resource designed for querying activation of human endogenous retroviruses across major cancer types	56
OsLTP47 may function in a lipid transfer relay essential for pollen wall development in rice	54
Ancestral genome reconstruction and the evolution of chromosomal rearrangements in Triticeae	53
Bmelo12, an elongase of very long-chain fatty acids gene, regulates silk yield in Bombyx mori	52
Building a cattle pan-genome using more de novo assemblies	52
Infection of SARS-CoV-2 causes severe pathological changes in mouse testis	51
Erratum to “GenomeSyn: a bioinformatics tool for visualizing genome synteny and structural variations” [J. Genet. Genom. (2022) 49, 1174–1176]	51
Neutrophils disrupt the intestinal barrier via IL-22/TGF-β/Mmp9 axis in the zebrafish model of inflammatory bowel disease	49
TMEM63B regulates postnatal development of cochlear sensory epithelia via thyroid hormone signaling	48
Ectopic expression of Myomaker and Myomixer in slow muscle cells induces slow muscle fusion and myofiber death	42
Molecular cytogenetic map visualizes the heterozygotic genome and identifies translocation chromosomes in Citrus sinensis	41

Deciphering the influence of gut and oral microbiomes on menopause for healthy aging	41
The CXCR4-CXCL12 axis promotes T cell reconstitution via efficient hematopoietic immigration	39
CliPME: the clinical pathogenic bacteria mutation and expression database	38
NCAD v1.0: a database for non-coding variant annotation and interpretation	37
An LRR-RLK protein modulates drought- and salt-stress responses in maize	37
Gap-free genome assembly and metabolomics analysis of common bean provide insights into genomic characteristics and metabolic determinants of seed coat pigmentation	37
Corrigendum to “AMPK controls sucrose taste sensitization in Drosophila” [Journal of Genetics and Genomics (2023) 50, 50–53]	36
VdMKK1-mediated cell wall integrity is essential for virulence in vascular wilt pathogen Verticillium dahliae	36
A critical evaluation of deep-learning based phylogenetic inference programs using simulated datasets	34
3D landscape reorganization in response to feeding preferences adaptation in the youngest split Gymnocypris fish	34
ZFP151 enhances drought tolerance in rice through direct activation of NCED4 expression	33
The right is more conservative than the left: a postnatal hypothesis of handedness based on mice	33
Capn3b-deficient zebrafish model reveals a key role of autoimmune response in LGMDR1	33
Erratum to ’Deep insights and clinical benefits from the comprehensive cohort of fetal skeletal dysplasia in China’	32
Activation of γ-globin expression by a common variant disrupting IKAROS-binding motif in β-thalassemia	32
ccdc141 is required for left-right axis development by regulating cilia formation in the Kupffer's vesicle of zebrafish	32
The genetic control of glabrous glume during African rice domestication	31
Identification of QTL-by-environment interaction by controlling polygenic background effect	31
Genetic structure and domestication footprints of the tusk, coat color, and ear morphology in East Chinese pigs	31
Understanding the mechanistic regulation of ferroptosis in cancer: the gene matters	30
The Magnaporthe oryzae effector MoCHT1 targets and stabilizes rice OsLLB to suppress jasmonic acid synthesis and enhance infection	30
Rapid and robust sex determination from ancient enamel proteomes using protSexInferer	30
Haplotype-resolved methylation profiling across three generations reveals principles of human epigenetic inheritance	29
Znf706 regulates germ plasm assembly and primordial germ cell development in zebrafish	29
VSOLassoBag: a variable-selection oriented LASSO bagging algorithm for biomarker discovery in omic-based translational research	28
Unveiling cell-type-specific mode of evolution in comparative single-cell expression data	28
Natural history and phenotype–genotype correlations in GJB2-related hearing loss: a systematic and comprehensive review	28
Fli1 acts in parallel with Pu.1 to control macrophage and neutrophil fate in zebrafish	27
Variation in the promoter of OsNPF7.1 contributes to nitrate uptake, remobilization, and grain yield in upland rice	26
Triticeae-BGC: a web-based platform for detecting, annotating and evolutionary analysis of biosynthetic gene clusters in Triticeae	26
A human-specific cytotoxic neopeptide generated by the deafness gene Cingulin	26
Coordinated regulation of cortical astrocyte maturation by OLIG1 and OLIG2 through BMP7 signaling modulation	26
CancerSRT: a spatially resolved transcriptomics database for human cancers	25
Absence of Serpinb6a causes progressive hair cell apoptosis and hearing loss in mice	25
Transcription factors BnaC09.FUL and BnaC06.WIP2 antagonistically regulate flowering time under long-day conditions in Brassica napus	25
Natural variation of CT2 affects the embryo/kernel weight ratio in maize	24
microRNA-2184 orchestrates Mauthner-cell axon regeneration in zebrafish via syt3 modulation	24
Thyroid-stimulating hormone-thyroid hormone signaling contributes to circadian regulation through repressing clock2/npas2 in zebrafish	24
Epigenetic variation in maize agronomical traits for breeding and trait improvement	24
Nitrogen inhibition of nitrogenase activity involves the modulation of cytosolic invertase in soybean nodule	23
Genetic regulatory landscape of gene expression during leaf and stem development in common tobacco	23
MEI4 variations drive female reproductive disorders via impaired oocyte abundance and developmental potential	22
Characterizing structural variants based on graph-genotyping provides insights into pig domestication and local adaption	22
Multidisciplinary exploration of ancient atherosclerosis: Paleo-genomic and paleo-nutritional analysis of a 13th century artificial mummy in China	21
CDCP: a visualization and analyzing platform for single-cell datasets	20
Migration and proliferation of ductal cells promote pancreatic repair after trauma	20
Two ABCI family transporters, OsABCI15 and OsABCI16, are involved in grain-filling in rice	20
Diverse functions of sex determination gene doublesex on sexually dimorphic neuronal development and behaviors	20
Constructing the metabolic network of wheat kernels based on structure-guided chemical modification and multi-omics data	20
Integration of light, carbon, and nitrogen pathways in regulating rice yield	20

Stomatal maturomics: hunting genes regulating guard cell maturation and function formation from single-cell transcriptomes	19
Biallelic MED16 variants disrupt neural development and lead to an intellectual disability syndrome	19
Reconstructing cell lineage trees with genomic barcoding: approaches and applications	19
Homozygous nonsense variants of KCTD19 cause male infertility in humans and mice	18
Centromere architecture and sex chromosome evolution in garden asparagus revealed by a gap-free haplotype-resolved genome	18
Mammary stem cells: from molecular cues to orchestrated regulatory mechanisms and its implications in breast cancer	17
Fulminant myocarditis induced by SARS-CoV-2 infection without severe lung involvement: insights into COVID-19 pathogenesis	17
IMAGGS: a radiogenomic framework for identifying multi-way associations in breast cancer subtypes	17
Single-cell RNA-Seq reveals transcriptional regulatory networks directing the development of mouse maxillary prominence	17
The application and prospects of spatial omics technologies in clinical medical research and molecular diagnostics	17
The HPCA1–VDAC3 module mediates the humidity adaptation trade-off by interfering with ROS homeostasis in Arabidopsis thaliana	17
Identification of FUT7 hypomethylation as the blood biomarker in the prediction of early-stage lung cancer	16
Phenotypic advantages and improved genomic stability following selection in advanced selfing-generations of Brassica allohexaploids	16
The power of “controllers”: Transposon-mediated duplicated genes evolve towards neofunctionalization	16
A gain-of-function variant in RICTOR predisposes to human obesity	16
Integrative multi-omics and genomic prediction reveal genetic basis of salt tolerance in alfalfa	16
A non-canonical bipartite NLS dictates nuclear import and function of the Drosophila Pc protein	16
Synchronized lineage tracing of cell membranes and nuclei by dual recombinases and dual fluorescent	16
Genomic sequencing as a key primary recommendation for neonatal hyperbilirubinemia: a population-based multicenter study	16
Design strategies for enhanced sustainable green revolution productivity in rice	15
Dissecting the functional roles of CTCF and CTCF-s in human embryonic stem cells	15
Ancient mitochondrial genome depicts sheep maternal dispersal and migration in Eastern Asia	15
Nitrogen assimilation in plants: current status and future prospects	15
A single-nucleus transcriptome atlas of soybean anthers	15
Lipid metabolism and metabolites: Emerging roles in systemic physiology and metabolic diseases	15
Development of a haploid inducer by editing HvMTL in barley	15
Genetic innovations underlying the evolution of root nodule symbiosis in Leguminosae	15
Both gain- and loss-of-function variants of KCNA1 are associated with paroxysmal kinesigenic dyskinesia	15
Genomic insights into the genetic diversity, lateral gaits and high-altitude adaptation of Chakouyi (CKY) horses	14
Genetic landscape of hereditary cardiomyopathies and arrhythmias in China	14
GeMemiOM: the curated database on genes, putative methylation study targets, and microRNA targets for otitis media	14
Advances in monogenic female infertility	14
AtPQT11, a P450 enzyme, detoxifies paraquat via N-demethylation	14
Two diversities meet in the rhizosphere: root specialized metabolites and microbiome	14
Corrigendum to “Root-derived long-distance signals trigger ABA synthesis and enhance drought resistance in Arabidopsis” [Journal of Genetics and Genomics (2024) 51, 749–761]	14
Combining single-cell profiling and functional analysis explores the role of pseudogenes in human early embryonic development	14
The mechanistic insights into fruit ripening: integrating phytohormones, transcription factors, and epigenetic modification	14
Protein post-translational modifications in auxin signaling	14
Characteristics of TP53 germline variants and their correlations with Li-Fraumeni syndrome or Li-Fraumeni-like syndrome in Chinese tumor patients	14
Addition of the T5 exonuclease increases the prime editing efficiency in plants	14
Root-derived long-distance signals trigger ABA synthesis and enhance drought resistance in Arabidopsis	14
Synergy of gut microbiota and host genome in driving heterosis expression of chickens	13
Rare variants in FANCJ induce premature ovarian insufficiency in humans and mice	13
CCDC181 is required for proper spermiogenesis in mice	13
hfCas12Max-mediated targeted integration at accessible chromatin regions with a goat-derived UCOE enhances stable recombinant lactoferrin expression	13
Mesenteric lymph system constitutes the second route in gut–liver axis and transports metabolism-modulating gut microbial metabolites	13
OsbZIP27 coordinates with OsHUB1 and OsHUB2 to modulate drought tolerance in rice	13
Recapitulation of key phenotypes and pathological features of primary familial brain calcification (PFBC) in a mouse Slc20a2S602W/S602W model	13
Dosage effect genes modulate grain development in synthesized Triticum durum-Haynaldia villosa allohexaploid	13
S-sulfenylation-mediated inhibition of the GSNOR1 activity regulates ovule development in Arabidopsis	13
An elite haplotype of the glutamine synthetase gene TaGS1.1-6A is associated with increased nitrogen use- and yield-related traits in wheat	13
circRNAs derived from a nuclear hormone receptor act differentially on insect metamorphosis and reproduction	13
Bi-allelic GSPT1 variants are associated with a syndromic neurodevelopmental disorder characterized by intellectual disability and microcephaly	13
Understanding and enhancing rice resistance to false smut disease	13
Whole-genome sequencing reveals selection signals among Chinese, Pakistani, and Nepalese goats	13
Genetic basis of geographical differentiation, breeding selection, domestication effects, and breeding application for TaJAZ1 in wheat	13
DPB3 and DPB4 proteins regulate Medicago flowering and leaf anthocyanin biosynthesis	12
The ARHGAP10-202aa protein encoded by circARHGAP10 promotes skeletal muscle development and regeneration	12
Loss of lims1 causes aberrant cardiac remodeling and heart failure via activating gp130/Jak1/Stat3 pathway in zebrafish	12
A simple and precise method (Y2H-in-frame-seq) improves yeast two-hybrid screening with cDNA libraries	12
Nutritional geometry framework of sucrose taste in Drosophila	12
Localized production of LECT2 by orthotopic histiocytes during inflammation	12
Deciphering the evolution and complexity of wheat germplasm from a genomic perspective	12
Corrigendum to “Biogenesis of autophagosomes from the ERGIC membrane system” [Journal of Genetics and Genomics (2023) 50, 3–6]	12
The interplay between extracellular and intracellular auxin signaling in plants	12
The local density of H3K9me3 dictates the stability of HP1α condensates-mediated genomic interactions	12
VT3D: a visualization toolbox for 3D transcriptomic data	12
Toll-9 prevents the proliferation of injected oncogenic cells in adult flies	12
Polyamine oxidase 3 is involved in salt tolerance at the germination stage in rice	11
Probiotic potential of Parabacteroides johnsonii in mitigating age-related ovarian functional decline	11
Translation machinery: the basis of translational control	11
To see and to know: the power of live imaging in illuminating and decoding biological complexity	11
A multi-ancestry GWAS meta-analysis of facial features and its application in predicting archaic human features	11
Characterization of heavy-chain antibody gene repertoires in Bactrian camels	11
Engineering a transport-facilitating molecular module to improve seed-setting rate and yield in rice	11
Microbiota-mediated shaping of mouse spleen structure and immune function characterized by scRNA-seq and Stereo-seq	11
O-GlcNAcylation regulates phagocytosis by promoting Ezrin localization at the cell cortex	11
Current therapies for osteoarthritis and prospects of CRISPR-based genome, epigenome, and RNA editing in osteoarthritis treatment	11
Genetic and molecular mechanisms of phytohormone-mediated seed size control in crops	11
Developmental regulation of neuronal gene expression by Elongator complex protein 1 dosage	11

Genome-wide analysis of Q binding reveals a regulatory network that coordinates wheat grain yield and grain protein content	11
ADGAP: a user-friendly online ancient DNA database and genome analysis platform	11
Long-read sequencing and de novo assembly of the cynomolgus macaque genome	11
Epigenetic control of plant abiotic stress responses	11
Cdx1b protects intestinal cell fate by repressing signaling networks for liver specification	10
Ccdc57 is required for straightening the body axis by regulating ciliary motility in the brain ventricle of zebrafish	10
The shikimate pathway regulates programmed cell death	10
Deep insights and clinical benefits from the comprehensive cohort of fetal skeletal dysplasia in China	10
Laser capture microdissection for biomedical research: towards high-throughput, multi-omics, and single-cell resolution	10
Crop root system architecture in drought response	10
COL: a method for identifying putatively functional circular RNAs	10
TabHLH95-TaNF-YB1 module promotes grain starch synthesis in bread wheat	10
High-quality genome assembly of Carex capillifolia reveals genetic adaptations to drought stress in the Qinghai-Xizang plateau	10
Pathogenic TDRD12 variants cause defective piRNA pathway and male infertility in humans and mice	10
Genome-wide association analysis reveals regulatory genes for the metabolite synthesis of 2-acetyl-1-pyrroline in aromatic coconut (Cocos nucifera L.)	9
Comparative genomics reveals lineage-specific accelerated evolution and functional convergence in pigs	9
Genome-wide profiling of polymorphic short tandem repeats and their influence on gene expression and trait variation in diverse rice populations	9
The lawc gene emerged de novo from conserved genomic elements and acquired a broad expression pattern in Drosophila	9
Wide hybridizations reveal the robustness of functional centromeres in Triticum–Aegilops species complex lines	9
Genetic and molecular mechanisms of reproductive isolation in the utilization of heterosis for breeding hybrid rice	9
TAZ inhibits SCLC metastasis through GALNT18-mediated O-glycosylation	9
Decoding transcriptional regulation via a human gene expression predictor	9
Maize plastid terminal oxidase (ZmPTOX) regulates the color formation of leaf and kernel by modulating plastid development	9
Whole-genome sequence-based association study for immune cells in an eight-breed pig heterogeneous population	9
Systematic identification and screening of functional long noncoding RNAs during planarian regeneration	9
Harness the wild: progress and perspectives in wheat genetic improvement	9
Genomic allele-specific base editing with imperfect gRNA	9
Near-gapless telomere-to-telomere reference nuclear genome and variable mitochondrial genome of Amborella trichopoda	9
Viral receptor profiles of masked palm civet revealed by single-cell transcriptomics	9
Natural variations in grain length 10 (GL10) regulate rice grain size	9
Improved in situ sequencing for high-resolution targeted spatial transcriptomic analysis in tissue sections	9
Natural selection shaped the protective effect of the mtDNA lineage against obesity in Han Chinese populations	9
GenomeSyn-II: A comparative genomics framework integrating synteny visualization	9
Overexpression of CRYPTOCHROME 2 enhances shoot growth and wood formation in poplar under growth-restrictive short days	9
Phosphorylation of ATF2 promotes odontoblastic differentiation via intrinsic HAT activity	9
TMEM39A and TMEM131 facilitate bulk transport of ECM proteins through large COPII vesicle formation	9
Genome-wide association study of HBV-related hepatocellular carcinoma identifies a functional variant at the FAM114A1 locus	9
TaNPF6.2 improves agronomic traits via enhancing nitrogen uptake efficiency in wheat	9
Wheat TaPKL genes regulate pre-harvest sprouting and yield-related traits	8
m6A-modified RNAs possess distinct poly(A) tails	8
TMEM181: a key mediator of cytolethal distending toxin required for Wnt signaling activity	8
Variants in the Wnt co-receptor LRP6 are associated with familial exudative vitreoretinopathy	8
The HISTONE ACETYLTRANSFERASE 1 interacts with CONSTANS to promote flowering in Arabidopsis	8
The SNAPc complex mediates starvation-induced trans-splicing in Caenorhabditis elegans	8
A tunable genome editing system of the prime editor mediated by dihydrofolate reductase	8
Genome-editing of a circadian clock gene TaPRR95 facilitates wheat peduncle growth and heading date	8
Rab1 and Syntaxin 17 regulate hematopoietic homeostasis through β-integrin trafficking in Drosophila	8
Nuclear encoded elongation factor EF-Tu is required for chloroplast development in rice grown under low-temperature conditions	8
Revealing extensive inbreeding and less efficient purging of deleterious mutations in wild Amur tigers in China	8
Emerging roles of phosphoinositide-associated membrane trafficking in plant stress responses	8
Genetic variations in ZmEREB179 are associated with waterlogging tolerance in maize	8
Rapamycin alleviates neurodegeneration in a Drosophila model of spinocerebellar ataxia type 51	8
Dissecting the genetic basis of reproductive transition and reproductive growth in wheat by considering accumulated temperature	8
Fixation of hybrid sterility genes and favorable alleles of key yield-related genes with dominance contribute to the high yield of the Yongyou series of intersubspecific hybrid rice	8
High-throughput base editing KO screening of cellular factors for enhanced GBE	8
The OsCLV2s-OsCRN1 co-receptor regulates grain shape in rice	8
Genome engineering of the human gut microbiome	8
The landscape and clinical relevance of intronic polyadenylation in human cancers	8
3vGCIM: a compressed variance component mixed model for detecting QTL-by-environment interactions in RIL population	8
Genetic evidence for facial variation being a composite phenotype of cranial variation and facial soft tissue thickness	8
Functional characterization of OsLT9 in regulating rice leaf thickness	7
Differential regulation of JAK1 expression by ETS1 associated with predisposition to primary biliary cholangitis	7
K48- and K63-linked ubiquitination in plant development and stress responses	7
The m6A reader YTHDC2 maintains visual function and retinal photoreceptor survival through modulating translation of PPEF2 and PDE6B	7
Recombination and repeat-induced point mutation landscapes reveal trade-offs between the sexual and asexual cycles of Magnaporthe oryzae	7
CircPTEN-MT from PTEN regulates mitochondrial energy metabolism	7
PPR21 is involved in the splicing of nad2 introns via interacting with PPR-SMR1 and SPR2 and is essential to maize seed development	7
Two imprinted genes primed by DEMETER in the central cell and activated by WRKY10 in the endosperm	7
The role of primary cilia in physiological and pathological states of the central nervous system	7
Assessing the efficacy and safety of gemcitabine-induced thrombocytopenia/neutropenia and thrombocytopenia interventions in zebrafish	7
Corrigendum to “Absence of Serpinb6a causes progressive hair cell apoptosis and hearing loss in mice” [Journal of Genetics and Genomics (2023) 50, 122–125]	7
Delta.EPI: a probabilistic voting-based enhancer–promoter interaction prediction platform	7
Corrigendum to “Actin polymerization induces mitochondrial distribution during collective cell migration” [Journal of Genetics and Genomics (2023) 50 46–49]	7
Xgr is involved in body size control in Drosophila through promoting glucose uptake in the Malpighian tubules	7
A heavy metal transporter gene ZmHMA3a promises safe agricultural production on cadmium-polluted arable land	7
Neolithic to Bronze Age human maternal genetic history in Yunnan, China	7
The GW2-ERF115-SLRL2 module regulates seed dormancy in rice	7
Haplotype-resolved and chromosome-level genome assembly of Colorado potato beetle	7
Divergent expression of Neurl3 from hemogenic endothelial cells to hematopoietic stem progenitor cells during development	7
Chromosome-scale genomes of Quercus sichourensis and Quercus rex provide insights into the evolution and adaptation of Fagaceae	7
Emerging functions of tRNA modifications in mRNA translation and diseases	7
Tongue-coating microbiome reflects cardiovascular health and determines outcome in blood pressure intervention	7
High-quality genome assembly and genotype diversity of Medicago sativa ssp. Falcata	6
A rare KLHDC4 variant Glu510Lys is associated with genetic susceptibility and promotes tumor metastasis in nasopharyngeal carcinoma	6
Pan-genome analysis reveals a highly plastic genome and extensive secreted protein polymorphism in Puccinia striiformis f. sp. tritici	6
uniLIVER: a human liver cell atlas for data-driven cellular state mapping	6
ATN-161 alleviates caerulein-induced pancreatitis	6
Genetic interaction network of quantitative trait genes for heading date in rice	6
Phosphorylation of KAT-2B by WKS1/Yr36 redirects the lipid flux to jasmonates to enhance resistance against wheat stripe rust	6
Spatiotemporal dynamics of neuron differentiation and migration in the developing human spinal cord	6
tsRNADisease: a manually curated database of tsRNAs associated with human disease	6
Maize Chlorotic Leaf Spot1 encodes a fumarylacetoacetate hydrolase essential for carbohydrate partitioning	6
Genetic basis of canine separation-related behavior: putative enhancer-dependent regulation of SLC32A1 and conservation in human psychiatric disorders	6
Characterization of zebrafish alas2 reporter for study on erythropoiesis, blood flow, and erythroid disease	6
H3K36me3 and H2A.Z coordinately modulate flowering time in Arabidopsis	6