Journal of Integrative Plant Biology

Papers
(The TQCC of Journal of Integrative Plant Biology is 14. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)
ArticleCitations
EXPLICIT‐Kinase: A gene expression predictor for dissecting the functions of the Arabidopsis kinome316
Paternally imprinted LATE‐FLOWERING2 transcription factor contributes to paternal‐excess interploidy hybridization barriers in wheat224
A resurfaced sensor NLR confers new recognition specificity to non‐MAX effectors174
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A NAC transcription factor MNAC3‐centered regulatory network negatively modulates rice immunity against blast disease139
Chromatin‐remodeling complexes: Conserved and plant‐specific subunits in Arabidopsis122
Apple MIEL1/ABI5‐MAX2 regulatory module links strigolactone and abscisic acid signals116
Unveiling a half‐century mystery of molecular bases for three‐line hybrid rice breeding system102
Specialized endoplasmic reticulum‐derived vesicles in plants: Functional diversity, evolution, and biotechnological exploitation87
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The regulatory mechanism of rapid lignification for timely anther dehiscence85
Molecular regulation of the key specialized metabolism pathways in medicinal plants81
UVR8‐TCP4‐LOX2 module regulates UV‐B tolerance in Arabidopsis81
The origin and evolution of carpels and fruits from an evo‐devo perspective78
SD‐RLK28 positively regulates pollen hydration on stigmas as a PCP‐Bβ receptor in Arabidopsis thaliana75
Auxin signaling module OsSK41‐OsIAA10‐OsARF regulates grain yield traits in rice72
The RING zinc finger protein LbRZF1 promotes salt gland development and salt tolerance in Limonium bicolor71
Gibberellin promotes cambium reestablishment during secondary vascular tissue regeneration after girdling in an auxin‐dependent manner in Populus67
Structural insight into chitin perception by chitin elicitor receptor kinase 1 of Oryza sativa62
Agronomical selection on loss‐of‐function of GIGANTEA simultaneously facilitates soybean salt tolerance and early maturity62
Brassinosteroid signaling regulates phosphate starvation‐induced malate secretion in plants61
Cell type‐specific proteomics uncovers a RAF15‐SnRK2.6/OST1 kinase cascade in guard cells58
Understanding protein translocation across chloroplast membranes: Translocons and motor proteins56
Engineering broad‐spectrum disease‐resistant rice by editing multiple susceptibility genes56
The m6A reader SiYTH1 enhances drought tolerance by affecting the messenger RNA stability of genes related to stomatal closure and reactive oxygen species scavenging in Setaria italica56
Phosphorylation of MtRopGEF2 by LYK3 mediates MtROP activity to regulate rhizobial infection inMedicago truncatula56
The interaction of nutrient uptake with biotic and abiotic stresses in plants55
A recently evolved BAHD acetyltransferase, responsible for bitter soyasaponin A production, is indispensable for soybean seed germination54
PagGRF12a interacts with PagGIF1b to regulate secondary xylem development through modulating PagXND1a expression in Populus alba × P. glandulosa54
Zinc‐finger protein GmZF351 improves both salt and drought stress tolerance in soybean54
Origin and evolution of green plants in the light of key evolutionary events53
Young Leaf White Stripe encodes a P‐type PPR protein required for chloroplast development53
The kinase OsSK41/OsGSK5 negatively regulates amylose content in rice endosperm by affecting the interaction between OsEBP89 and OsBP553
Assembly dynamics of East Asian subtropical evergreen broadleaved forests: New insights from the dominant Fagaceae trees52
An integrative overview of cold response and regulatory pathways in horticultural crops52
Integrating multiplicate data: A new trend for taxonomic study51
OsNAC5 orchestrates OsABI5 to fine‐tune cold tolerance in rice51
The transcriptional co‐repressor SEED DORMANCY 4‐LIKE (AtSDR4L) promotes the embryonic‐to‐vegetative transition in Arabidopsis thaliana51
The plant terpenes DMNT and TMTT function as signaling compounds that attract Asian corn borer (Ostrinia furnacalis) to maize plants51
Controlling flowering of Medicago sativa (alfalfa) by inducing dominant mutations50
The SlWRKY42–SlMYC2 module synergistically enhances tomato saline–alkali tolerance by activating the jasmonic acid signaling and spermidine biosynthesis pathway50
Allele‐aware chromosome‐scale assembly of the allopolyploid genome of hexaploid Ma bamboo (Dendrocalamus latiflorus Munro)49
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The MIEL1‐ABI5/MYB30 regulatory module fine tunes abscisic acid signaling during seed germination48
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High‐throughput genome editing in rice with a virus‐based surrogate system48
Effective methods for isolation and purification of extracellular vesicles from plants48
Phylotranscriptomic insights into Asteraceae diversity, polyploidy, and morphological innovation48
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Interplay of phytohormones and epigenetic regulation: A recipe for plant development and plasticity42
The spliceophilin CYP18‐2 is mainly involved in the splicing of retained introns under heat stress inArabidopsis42
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Global identification of key genes for pollen germination in rice through high‐throughput screening and gene editing41
MYB2 and MYB108 regulate lateral root development by interacting with LBD29 in Arabidopsis thaliana41
The chromatin remodeler BRAHMA recruits HISTONE DEACETYLASE6 to regulate root growth inhibition in response to phosphate starvation in Arabidopsis41
Natural variation in linalool metabolites: One genetic locus, many functions?41
Multiple roles of NAC transcription factors in plant development and stress responses40
The Arabidopsis NuA4 histone acetyltransferase complex is required for chlorophyll biosynthesis and photosynthesis40
Tyrosylprotein sulfotransferase suppresses ABA signaling via sulfation of SnRK2.2/2.3/2.640
Sucrose induces flowering by degradation of the floral repressor Ghd7 via K48‐linked polyubiquitination in rice39
Quantitative proteomics reveals redox‐based functional regulation of photosynthesis under fluctuating light in plants39
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Rapid responses: Receptor‐like kinases directly regulate the functions of membrane transport proteins in plants38
Striking a growth–defense balance: Stress regulators that function in maize development37
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The salt‐activated CBF1/CBF2/CBF3‐GALS1 module fine‐tunes galactan‐induced salt hypersensitivity in Arabidopsis36
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Sulfur metabolism under stress: Oxidized glutathione inhibits methionine biosynthesis by destabilizing the enzyme cystathionine γ‐synthase36
The battle of crops against drought: Genetic dissection and improvement36
Establishment of genome‐editing system and assembly of a near‐complete genome in broomcorn millet36
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The Phytophthora effector Avh94 manipulates host jasmonic acid signaling to promote infection35
A synthetic biology approach for identifying de‐SUMOylation enzymes of substrates35
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FIGL1 coordinates with dosage‐sensitive BRCA2 in modulating meiotic recombination in maize35
New insights into CNL‐mediated immunity through recognition of Ralstonia solanacearum RipP1 by NbZAR134
SICKLE represses photomorphogenic development of Arabidopsis seedlings via HY5‐ and PIF4‐mediated signaling34
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Simultaneous gene editing of three homoeoalleles in self‐incompatible allohexaploid grasses33
Low copy numbers for mitochondrial DNA moderates the strength of nuclear–cytoplasmic incompatibility in plants33
ERF5 enhances protocorm‐like body regeneration via enhancement of STM expression in Dendrobium orchid33
Polyamines: The valuable bio‐stimulants and endogenous signaling molecules for plant development and stress response33
ZmGRAS11, transactivated by Opaque2, positively regulates kernel size in maize33
Halotolerant Bacillus sp. strain RA coordinates myo‐inositol metabolism to confer salt tolerance to tomato32
Lethal effects of tea‐oil Camellia on honeybee larvae due to pollen toxicity32
Identification of natural allelic variation in TTL1 controlling thermotolerance and grain size by a rice super pan‐genome32
Integration of light and temperature signaling pathways in plants32
Protein ubiquitination in plant peroxisomes32
Circadian clock in plants: Linking timing to fitness31
CircZmMED16 delays plant flowering by negatively regulating starch content through its binding to ZmAPS131
Enhancing genetic transformation efficiency in cucurbit crops through AtGRF5 overexpression: Mechanistic insights and applications31
The METHYLTRANSFERASE B–SERRATE interaction mediates the reciprocal regulation of microRNA biogenesis and RNA m6A modification30
Phylogenomics and the flowering plant tree of life30
Ribonuclease H‐like gene SMALL GRAIN2 regulates grain size in rice through brassinosteroid signaling pathway30
SMALL AND ROUND GRAIN is involved in the brassinosteroid signaling pathway which regulates grain size in rice30
The unconventional prefoldin RPB5 interactor mediates the gravitropic response by modulating cytoskeleton organization and auxin transport in Arabidopsis29
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Translation rate underpins specific targeting of N‐terminal transmembrane proteins to mitochondria29
Oil crops: From the classical traits to genetic improvement29
The receptor‐like cytoplasmic kinase OsBSK1‐2 regulates immunity via an HLH/bHLH complex29
Light signaling‐dependent regulation of plastid RNA processing in Arabidopsis28
Proteomic dynamics revealed sex‐biased responses to combined heat‐drought stress in Marchantia28
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The OsMAPK5–OsWRKY72 module negatively regulates grain length and grain weight in rice27
The egg cell is preferentially fertilized in Arabidopsis double fertilization27
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OsPRMT5 methylates OsPAL1 to promote rice resistance, hindered by a Xanthomonas oryzae effector27
Navigating the landscape of plant proteomics27
Circadian rhythms driving a fast‐paced root clock implicate species‐specific regulation in Medicago truncatula27
Domains rearranged methyltransferases (DRMs)‐mediated DNA methylation plays key roles in modulating gene expression and maintaining transposable element silencing in soybean27
CDC48B facilitates the intercellular trafficking of SHORT‐ROOT during radial patterning in roots27
SapBase: A central portal for functional and comparative genomics of Sapindaceae species26
CRISPR/Cas9 gene editing and natural variation analysis demonstrate the potential for HvARE1 in improvement of nitrogen use efficiency in barley26
Low temperature‐mediated repression and far‐red light‐mediated induction determine morning FLOWERING LOCUS T expression levels26
The transcription factor NAC102 confers cadmium tolerance by regulating WAKL11 expression and cell wall pectin metabolism in Arabidopsis26
MicroRNA gatekeepers: Orchestrating rhizospheric dynamics26
The transcription factors TLR1 and TLR2 negatively regulate trichome density and artemisinin levels in Artemisia annua26
The F‐box protein SHORT PRIMARY ROOT modulates primary root meristem activity by targeting SEUSS‐LIKE protein for degradation in rice26
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OpNAC1 transcription factor regulates the biosynthesis of the anticancer drug camptothecin by targeting loganic acid O‐methyltransferase in Ophiorrhiza pumila25
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Lysozyme inhibits postharvest physiological deterioration of cassava24
Climate‐influenced boreotropical survival and rampant introgressions explain the thriving of New World grapes in the north temperate zone24
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Development of elite rice with broad‐spectrum resistance through pyramiding of key resistance gene and simultaneously editing multiple susceptibility genes24
GhCASPL1 regulates secondary cell wall thickening in cotton fibers by stabilizing the cellulose synthase complex on the plasma membrane24
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Vitamin B1 THIAMIN REQUIRING1 synthase mediates the maintenance of chloroplast function by regulating sugar and fatty acid metabolism in rice24
PE6c greatly enhances prime editing in transgenic rice plants23
RNA silencing: From discovery and elucidation to application and perspectives23
Duplication and sub‐functionalization of flavonoid biosynthesis genes plays important role in Leguminosae root nodule symbiosis evolution23
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R‐loop: The new genome regulatory element in plants22
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A SlMYB78‐regulated bifunctional gene cluster for phenolamide and salicylic acid biosynthesis during tomato domestication, reducing disease resistance22
A novel C2H2‐type zinc‐finger transcription factor, CitZAT4, regulates ethylene‐induced orange coloration in Satsuma mandarin flavedo (Citrus unshiu Marc.)22
Climate factors affect forest biomass allocation by altering soil nutrient availability and leaf traits22
A simplified SynCom based on core–helper strain interactions enhances symbiotic nitrogen fixation in soybean22
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Highly efficient, genotype‐independent transformation and gene editing in watermelon (Citrullus lanatus) using a chimeric ClGRF4‐GIF1 gene22
Corrigendum21
BBX9 forms feedback loops with PIFs and BBX21 to promote photomorphogenic development21
Bracelet salt glands of the recretohalophyte Limonium bicolor: Distribution, morphology, and induction21
Brassinosteroids inhibit miRNA‐mediated translational repression by decreasing AGO1 on the endoplasmic reticulum21
Mechanisms of vacuolar phosphate efflux supporting soybean root hair growth in response to phosphate deficiency21
Anti‐microtubule activity of the traditional Chinese medicine herb Northern Ban Lan (Isatis tinctoria) leads to glucobrassicin20
Protein S‐acylation, a new panacea for plant fitness20
NF‐YCs modulate histone variant H2A.Z deposition to regulate photomorphogenic growth in Arabidopsis20
Versatile effectors of phytopathogenic fungi target host immunity20
SoySNP618K array: A high‐resolution single nucleotide polymorphism platform as a valuable genomic resource for soybean genetics and breeding20
MALE STERILITY 3 encodes a plant homeodomain‐finger protein for male fertility in soybean20
Advances in photosynthesis research: Unlocking the potential for food security, renewable energy, and environmental sustainability20
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Cell wall remodeling during plant regeneration20
A pair of G‐type lectin receptor‐like kinases modulates nlp20‐mediated immune responses by coupling to the RLP23 receptor complex20
Ca2+ signaling in plant responses to abiotic stresses20
Growth asymmetry precedes differential auxin response during apical hook initiation in Arabidopsis19
How did the amphibious Eleocharis vivipara acquire its C3–C4 photosynthetic plasticity?19
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A straight‐forward seed production technology system for foxtail millet (Setaria italica)19
TaGPAT6 enhances salt tolerance in wheat by synthesizing cutin and suberin monomers to form a diffusion barrier19
Cryo‐EM structure of a minimal reaction center–light‐harvesting complex from the phototrophic bacterium Chloroflexus aurantiacus19
Creation of fragrant peanut using CRISPR/Cas919
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Potassium transporter OsHAK9 regulates seed germination under salt stress by preventing gibberellin degradation through mediating OsGA2ox7 in rice19
A domesticated Harbinger transposase forms a complex with HDA6 and promotes histone H3 deacetylation at genes but not TEs in Arabidopsis19
CRISPR/Sc++‐mediated genome editing in rice19
Scaffold protein RACK1A positively regulates leaf senescence by coordinating the EIN3‐miR164‐ORE1 transcriptional cascade in Arabidopsis19
A high‐resolution transcriptomic atlas depicting nitrogen fixation and nodule development in soybean18
RING‐box proteins regulate leaf senescence and stomatal closure via repression of ABA transporter gene ABCG4018
Integrated view of plant metabolic defense with particular focus on chewing herbivores18
From molecular basics to agronomic benefits: Insights into noncoding RNA‐mediated gene regulation in plants18
Single‐cell RNA sequencing reveals a high‐resolution cell atlas of xylem in Populus18
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Reactive oxygen species: Multidimensional regulators of plant adaptation to abiotic stress and development17
Precise tiller angle control by manipulating TAC1 expression in rice17
Role of serotonin in plant stress responses: Quo vadis?17
Rice seed germination priming by salicylic acid and the emerging role of phytohormones in anaerobic germination17
Coat protein of Chinese wheat mosaic virus upregulates and interacts with cytosolic glyceraldehyde‐3‐phosphate dehydrogenase, a negative regulator of plant autophagy, to promote virus infection17
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PuHox52 promotes coordinated uptake of nitrate, phosphate, and iron under nitrogen deficiency in Populus ussuriensis17
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Diploid species phylogeny and evolutionary reticulation indicate early radiation of Ephedra in the Tethys coast17
Natural variations in Multi‐Grain Spikelet 1 enhance grain number in sorghum17
Structure of plant photosystem I−light harvesting complex I supercomplex at 2.4 Å resolution16
AtMCM10 promotes DNA replication‐coupled nucleosome assembly in Arabidopsis16
Chromosomal‐level genome and metabolome analyses of highly heterozygous allohexaploid Dendrocalamus brandisii elucidate shoot quality and developmental characteristics16
Chloroplast protein translocation complexes and their regulation16
CRISPR/Cas9‐mediated editing of GmTAP1 confers enhanced resistance to Phytophthora sojae in soybean16
Arabidopsis F‐BOX STRESS INDUCED 4 is required to repress excessive divisions in stomatal development16
Diverse roles of MYB transcription factors in plants16
An efficient CRISPR/Cas9 platform for targeted genome editing in rose (Rosa hybrida)15
The E3 ligase XBAT35 mediates thermoresponsive hypocotyl growth by targeting ELF3 for degradation in Arabidopsis15
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Regulation of FLC nuclear import by coordinated action of the NUP62‐subcomplex and importin β SAD215
Pleistocene glaciation advances the cryptic speciation of Stellera chamaejasme L. in a major biodiversity hotspot15
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Molecular mechanisms underlying the toxicity and detoxification of trace metals and metalloids in plants15
Arabidopsis phytochromes A and B synergistically repress SPA1 under blue light15
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Symplastic communication in the root cap directs auxin distribution to modulate root development14
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A bZIP transcription factor (CiFD) regulates drought‐ and low‐temperature‐induced flowering by alternative splicing in citrus14
Small bending, big curvature14
Differential SW16.1 allelic effects and genetic backgrounds contributed to increased seed weight after soybean domestication14
PROTEIN S‐ACYL TRANSFERASE 13/16 modulate disease resistance by S‐acylation of the nucleotide binding, leucine‐rich repeat protein R5L1 in Arabidopsis14
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Corrigendum14
Combined analyses of translatome and transcriptome in Arabidopsis reveal new players responding to magnesium deficiency14
Environmentally adaptive reshaping of plant photomorphogenesis by karrikin and strigolactone signaling14
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