Journal of Integrative Plant Biology

Papers
(The TQCC of Journal of Integrative Plant Biology is 16. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-02-01 to 2024-02-01.)
ArticleCitations
Contribution of phenylpropanoid metabolism to plant development and plant–environment interactions474
Epigenetic regulation in plant abiotic stress responses258
Protein kinases in plant responses to drought, salt, and cold stress252
Melatonin: A master regulator of plant development and stress responses221
The plant cell wall: Biosynthesis, construction, and functions172
Potassium and phosphorus transport and signaling in plants153
Mitogen‐activated protein kinase cascades in plant signaling121
Light signaling and UV‐B‐mediated plant growth regulation114
Hydrogen sulfide, a signaling molecule in plant stress responses103
Molecular mechanisms for the photoperiodic regulation of flowering in soybean102
Plant Metabolic Network 15: A resource of genome‐wide metabolism databases for 126 plants and algae93
The root microbiome: Community assembly and its contributions to plant fitness84
Auxin signaling: Research advances over the past 30 years81
Ethylene signaling in rice and Arabidopsis: New regulators and mechanisms81
Root developmental responses to phosphorus nutrition81
Mechanisms underlying legume–rhizobium symbioses78
The transcription factor ICE1 functions in cold stress response by binding to the promoters of CBF and COR genes77
B‐box proteins: Pivotal players in light‐mediated development in plants74
Soybean AP1 homologs control flowering time and plant height71
The role of light in regulating seed dormancy and germination68
The calcium‐dependent protein kinase ZmCDPK7 functions in heat‐stress tolerance in maize66
SmMYB2 promotes salvianolic acid biosynthesis in the medicinal herb Salvia miltiorrhiza65
The direct targets of CBFs: In cold stress response and beyond65
Ca2+ signaling in plant responses to abiotic stresses65
Aluminium is essential for root growth and development of tea plants (Camellia sinensis)64
Autophagy in plants: Physiological roles and post‐translational regulation63
Genome editing for plant research and crop improvement61
Phyllosphere microbiota: Community dynamics and its interaction with plant hosts59
Trehalose‐6‐phosphate phosphatase E modulates ABA‐controlled root growth and stomatal movement in Arabidopsis58
Plant cell totipotency: Insights into cellular reprogramming57
MYC2, MYC3, and MYC4 function additively in wounding‐induced jasmonic acid biosynthesis and catabolism54
A WRKY transcription factor confers aluminum tolerance via regulation of cell wall modifying genes53
A rare Waxy allele coordinately improves rice eating and cooking quality and grain transparency53
Arabidopsis U‐box E3 ubiquitin ligase PUB11 negatively regulates drought tolerance by degrading the receptor‐like protein kinases LRR1 and KIN749
An update on the function and regulation of methylerythritol phosphate and mevalonate pathways and their evolutionary dynamics49
Integrated metabolo‐transcriptomics and functional characterization reveals that the wheat auxin receptor TIR1 negatively regulates defense against Fusarium graminearum49
Increasing yield potential through manipulating of an ARE1 ortholog related to nitrogen use efficiency in wheat by CRISPR/Cas947
Single‐cell RNA sequencing reveals a high‐resolution cell atlas of xylem in Populus47
Plant plasma membrane‐resident receptors: Surveillance for infections and coordination for growth and development47
Phylotranscriptomic insights into Asteraceae diversity, polyploidy, and morphological innovation47
Plant abiotic stress: New insights into the factors that activate and modulate plant responses46
Co‐regulation of indole glucosinolates and camalexin biosynthesis by CPK5/CPK6 and MPK3/MPK6 signaling pathways45
Ethylene and salicylic acid synergistically accelerate leaf senescence in Arabidopsis44
Oryza sativa FER‐LIKE FE DEFICIENCY‐INDUCED TRANSCRIPTION FACTOR (OsFIT/OsbHLH156) interacts with OsIRO2 to regulate iron homeostasis43
Arabidopsis E3 ligase KEG associates with and ubiquitinates MKK4 and MKK5 to regulate plant immunity43
Chromatin remodeling factors regulate environmental stress responses in plants41
WRKY transcription factors WRKY12 and WRKY13 interact with SPL10 to modulate age‐mediated flowering41
Fg12 ribonuclease secretion contributes to Fusarium graminearum virulence and induces plant cell death40
Salicylic acid and ethylene coordinately promote leaf senescence40
Maize endosperm development39
Combined genome‐wide association study and transcriptome analysis reveal candidate genes for resistance to Fusarium ear rot in maize39
Osa‐miR1873 fine‐tunes rice immunity against Magnaporthe oryzae and yield traits39
Effective methods for isolation and purification of extracellular vesicles from plants39
The origin of Wxla provides new insights into the improvement of grain quality in rice38
ERF1 delays flowering through direct inhibition of FLOWERING LOCUS T expression in Arabidopsis37
Transcriptional regulation of fleshy fruit texture36
Versatile effectors of phytopathogenic fungi target host immunity36
A bHLH transcription activator regulates defense signaling by nucleo‐cytosolic trafficking in rice36
Histone deacetylase HDA710 controls salt tolerance by regulating ABA signaling in rice36
Rice seed storage proteins: Biosynthetic pathways and the effects of environmental factors35
FT5a interferes with the Dt1‐AP1 feedback loop to control flowering time and shoot determinacy in soybean34
Abscisic acid signaling negatively regulates nitrate uptake via phosphorylation of NRT1.1 by SnRK2s in Arabidopsis34
Induction of priming by cold stress via inducible volatile cues in neighboring tea plants33
Efficient and genotype independent maize transformation using pollen transfected by DNA‐coated magnetic nanoparticles33
Profiling of circular RNA N6‐methyladenosine in moso bamboo (Phyllostachys edulis) using nanopore‐based direct RNA sequencing33
Functional assembly of root‐associated microbial consortia improves nutrient efficiency and yield in soybean33
SHY2 as a node in the regulation of root meristem development by auxin, brassinosteroids, and cytokinin32
The Class III peroxidase gene OsPrx30, transcriptionally modulated by the AT‐hook protein OsATH1, mediates rice bacterial blight‐induced ROS accumulation32
GDSL esterase/lipases OsGELP34 and OsGELP110/OsGELP115 are essential for rice pollen development32
Creation of aromatic maize by CRISPR/Cas31
A recent retrotransposon insertion of J caused E6 locus facilitating soybean adaptation into low latitude31
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in 31
SIZ1 negatively regulates aluminum resistance by mediating the STOP1–ALMT1 pathway in Arabidopsis31
OsbZIP76 interacts with OsNF‐YBs and regulates endosperm cellularization in rice (Oryza sativa)30
Chromatin‐remodeling complexes: Conserved and plant‐specific subunits in Arabidopsis30
From genes to networks: The genetic control of leaf development30
Florigen trafficking integrates photoperiod and temperature signals in Arabidopsis30
Large chromosomal segment deletions by CRISPR/LbCpf1‐mediated multiplex gene editing in soybean29
The CBP/p300 histone acetyltransferases function as plant‐specific MEDIATOR subunits in Arabidopsis29
FKF1 F‐box protein promotes flowering in part by negatively regulating DELLA protein stability under long‐day photoperiod in Arabidopsis28
Development of an efficient plant dual cytosine and adenine editor28
The NPR1‐WRKY46‐WRKY6 signaling cascade mediates probenazole/salicylic acid‐elicited leaf senescence in Arabidopsis thaliana28
Efficient generation of homozygous substitutions in rice in one generation utilizing an rABE8e base editor28
Phytohormone dynamics in developing endosperm influence rice grain shape and quality28
Structure of plant photosystem I−light harvesting complex I supercomplex at 2.4 Å resolution27
Molecular mechanisms underlying the toxicity and detoxification of trace metals and metalloids in plants27
BTB/TAZ protein MdBT2 integrates multiple hormonal and environmental signals to regulate anthocyanin biosynthesis in apple27
PIF1 and RVE1 form a transcriptional feedback loop to control light‐mediated seed germination in Arabidopsis27
Regulation of cytoskeleton‐associated protein activities: Linking cellular signals to plant cytoskeletal function27
Fig fruit ripening is regulated by the interaction between ethylene and abscisic acid27
Crop phenotyping in a context of global change: What to measure and how to do it27
Drought stress and plant ecotype drive microbiome recruitment in switchgrass rhizosheath26
The Arabidopsis phosphatase PP2C49 negatively regulates salt tolerance through inhibition of AtHKT1;126
Ethylene‐induced stomatal closure is mediated via MKK1/3–MPK3/6 cascade to EIN2 and EIN325
ABNORMAL SHOOT 6 interacts with KATANIN 1 and SHADE AVOIDANCE 4 to promote cortical microtubule severing and ordering in Arabidopsis25
SINAT E3 ligases regulate the stability of the ESCRT component FREE1 in response to iron deficiency in plants25
Engineering broad‐spectrum disease‐resistant rice by editing multiple susceptibility genes25
The lncRNA39896–miR166b–HDZs module affects tomato resistance to Phytophthora infestans25
Rice FLOURY ENDOSPERM 18 encodes a pentatricopeptide repeat protein required for 5′ processing of mitochondrial nad5 messenger RNA and endosperm development24
RNA silencing: From discovery and elucidation to application and perspectives24
Shaping polyploid wheat for success: Origins, domestication, and the genetic improvement of agronomic traits24
Circadian clock in plants: Linking timing to fitness24
The E3 ligase XBAT35 mediates thermoresponsive hypocotyl growth by targeting ELF3 for degradation in Arabidopsis24
Pentatricopeptide repeat protein PHOTOSYSTEM I BIOGENESIS FACTOR2 is required for splicing of ycf324
Plant target of rapamycin signaling network: Complexes, conservations, and specificities24
Salicylic acid promotes quiescent center cell division through ROS accumulation and down‐regulation of PLT1, PLT2, and WOX524
Nicotiana benthamiana LRR‐RLP NbEIX2 mediates the perception of an EIX‐like protein from Verticillium dahliae24
The jasmonate‐induced bHLH gene SlJIG functions in terpene biosynthesis and resistance to insects and fungus24
Establishment of a dmp based maternal haploid induction system for polyploid Brassica napus and Nicotiana tabacum24
Brassinosteroids regulate outer ovule integument growth in part via the control of INNER NO OUTER by BRASSINOZOLE‐RESISTANT family transcription factors24
Roles of DEMETER in regulating DNA methylation in vegetative tissues and pathogen resistance24
The nodulation and nyctinastic leaf movement is orchestrated by clock gene LHY in Medicago truncatula24
Development of nutritious rice with high zinc/selenium and low cadmium in grains through QTL pyramiding23
Allele‐aware chromosome‐scale assembly of the allopolyploid genome of hexaploid Ma bamboo (Dendrocalamus latiflorus Munro)23
Betula platyphylla BpHOX2 transcription factor binds to different cis‐acting elements and confers osmotic tolerance23
Oryza sativa mediator subunit OsMED25 interacts with OsBZR1 to regulate brassinosteroid signaling and plant architecture in rice23
GmMs1 encodes a kinesin‐like protein essential for male fertility in soybean (Glycine max L.)23
Loss of Gn1a/OsCKX2 confers heavy‐panicle rice with excellent lodging resistance23
Induction of γ‐aminobutyric acid plays a positive role to Arabidopsis resistance against Pseudomonas syringae23
MiR319‐targeted OsTCP21 and OsGAmyb regulate tillering and grain yield in rice23
The miR166 mediated regulatory module controls plant height by regulating gibberellic acid biosynthesis and catabolism in soybean22
H3K36me2 is highly correlated with m6A modifications in plants22
Colonization of endophyte Acremonium sp. D212 in Panax notoginseng and rice mediated by auxin and jasmonic acid22
A novel CCCH‐type zinc finger protein SAW1 activates OsGA20ox3 to regulate gibberellin homeostasis and anther development in rice22
Lectin receptor kinase OsLecRK‐S.7 is required for pollen development and male fertility22
RING finger protein RGLG1 and RGLG2 negatively modulate MAPKKK18 mediated drought stress tolerance in Arabidopsis22
Pathogen‐informed breeding for crop disease resistance22
Flowering phenology as a core domestication trait in soybean22
Multiplex and optimization of dCas9‐TV‐mediated gene activation in plants22
Integration of light and temperature signaling pathways in plants22
Mediator tail module subunits MED16 and MED25 differentially regulate abscisic acid signaling in Arabidopsis22
Comprehensive identification of lysine 2‐hydroxyisobutyrylated proteins in Ustilaginoidea virens reveals the involvement of lysine 2‐hydroxyisobutyrylation in fungal virulence22
ZmSRL5is involved in drought tolerance by maintaining cuticular wax structure in maize21
Alternative splicing of MaMYB16L regulates starch degradation in banana fruit during ripening21
Global analysis of CCT family knockout mutants identifies four genes involved in regulating heading date in rice21
The battle of crops against drought: Genetic dissection and improvement21
The multi‐omics basis of potato heterosis21
Water stress resilient cereal crops: Lessons from wild relatives21
The MIEL1‐ABI5/MYB30 regulatory module fine tunes abscisic acid signaling during seed germination21
Ustilaginoidea virens modulates lysine 2‐hydroxyisobutyrylation in rice flowers during infection21
Phylogenomics and the flowering plant tree of life21
Phase separation in plants: New insights into cellular compartmentalization20
Targeted mutagenesis in Arabidopsis thaliana using CRISPR‐Cas12b/C2c120
CRISPR/Cas9 gene editing and natural variation analysis demonstrate the potential for HvARE1 in improvement of nitrogen use efficiency in barley20
GmPIN1‐mediated auxin asymmetry regulates leaf petiole angle and plant architecture in soybean20
Highly efficient, genotype‐independent transformation and gene editing in watermelon (Citrullus lanatus) using a chimeric ClGRF4‐GIF1 gene20
MdbHLH3 modulates apple soluble sugar content by activating phosphofructokinase gene expression20
Here comes the sun: How optimization of photosynthetic light reactions can boost crop yields20
Rice SPL10 positively regulates trichome development through expression of HL6 and auxin‐related genes19
A histone H3K27me3 reader cooperates with a family of PHD finger‐containing proteins to regulate flowering time in Arabidopsis19
Photobiology: Light signal transduction and photomorphogenesis19
CDE4 encodes a pentatricopeptide repeat protein involved in chloroplast RNA splicing and affects chloroplast development under low‐temperature conditions in rice19
A G‐type lectin receptor‐like kinase regulates the perception of oomycete apoplastic expansin‐like proteins19
Phytochrome B interacts with SWC6 and ARP6 to regulate H2A.Z deposition and photomorphogensis in Arabidopsis19
Reciprocal regulation between the negative regulator PP2CG1 phosphatase and the positive regulator OST1 kinase confers cold response in Arabidopsis19
HY5 regulates light‐responsive transcription of microRNA163 to promote primary root elongation in Arabidopsis seedlings19
Interaction of brassinosteroid and cytokinin promotes ovule initiation and increases seed number per silique in Arabidopsis19
A global alfalfa diversity panel reveals genomic selection signatures in Chinese varieties and genomic associations with root development19
Advances in structure and function of auxin response factor in plants18
Brassinosteroid signaling positively regulates abscisic acid biosynthesis in response to chilling stress in tomato18
A unique photosystem I reaction center from a chlorophyll d‐containing cyanobacterium Acaryochloris marina18
Plant base editing and prime editing: The current status and future perspectives18
Nitrate transporter NRT1.1 and anion channel SLAH3 form a functional unit to regulate nitrate‐dependent alleviation of ammonium toxicity18
Enhanced production of seed oil with improved fatty acid composition by overexpressing NAD+‐dependent glycerol‐3‐phosphate dehydrogenase in soybean18
BioClay™ prolongs RNA interference‐mediated crop protection against Botrytis cinerea18
WRKY33‐mediated indolic glucosinolate metabolic pathway confers resistance against Alternaria brassicicola in Arabidopsis and Brassica crops18
Plasma membrane H+‐ATPases‐mediated cytosolic proton gradient regulates pollen tube growth18
Primary root and root hair development regulation by OsAUX4 and its participation in the phosphate starvation response18
SlSTE1 promotes abscisic acid‐dependent salt stress‐responsive pathways via improving ion homeostasis and reactive oxygen species scavenging in tomato18
Balancing selection and wild gene pool contribute to resistance in global rice germplasm against planthopper17
Origin and evolution of green plants in the light of key evolutionary events17
Efficient genotype‐independent cotton genetic transformation and genome editing17
The Larix kaempferi genome reveals new insights into wood properties17
Integrated view of plant metabolic defense with particular focus on chewing herbivores17
Spatial phylogenetics of the Chinese angiosperm flora provides insights into endemism and conservation17
ANNEXIN 8 negatively regulates RPW8.1‐mediated cell death and disease resistance in Arabidopsis17
Salicylic acid biosynthesis is not from phenylalanine in Arabidopsis16
An in planta haploid induction system in Brassica napus16
Recent progression and future perspectives in cotton genomic breeding16
The transcription factors TLR1 and TLR2 negatively regulate trichome density and artemisinin levels in Artemisia annua16
The Arabidopsis NuA4 histone acetyltransferase complex is required for chlorophyll biosynthesis and photosynthesis16
Plant transfer RNA‐derived fragments: Biogenesis and functions16
Genome‐wide distribution and functions of the AAE complex in epigenetic regulation in Arabidopsis16
OsEDM2L mediates m6A of EAT1 transcript for proper alternative splicing and polyadenylation regulating rice tapetal degradation16
The ScCas9++ variant expands the CRISPR toolbox for genome editing in plants16
Ethylene promotes seed iron storage duringArabidopsisseed maturation via ERF95 transcription factor16
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