OOIR: Observatory of International Research

Papers

(The H4-Index of Genomics Proteomics & Bioinformatics is 32. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-08-01 to 2025-08-01.)

Article	Citations
Acknowledgments to Reviewers 2021	1125
PHISDetector: A Tool to Detect Diverse In Silico Phage–Host Interaction Signals for Virome Studies	725
WheatCENet: A Database for Comparative Co-Expression Networks Analysis of Allohexaploid Wheat and Its Progenitors	380
PSIA: A Comprehensive Knowledgebase of Plant Self-Incompatibility	275
Evaluation of T Cell Receptor Construction Methods from scRNA-Seq Data	175
Global Marine Cold Seep Metagenomes Reveal Diversity of Taxonomy, Metabolic Function, and Natural Products	133
OBIA: An Open Biomedical Imaging Archive	128
AVM: A Manually Curated Database of Aerosol-transmitted Virus Mutations, Human Diseases, and Drugs	90
Dynamic Landscapes of tRNA Transcriptomes and Translatomes in Diverse Mouse Tissues	90
RNase P: Beyond Precursor tRNA Processing	84
DeepCAGE: Incorporating Transcription Factors in Genome-Wide Prediction of Chromatin Accessibility	83
iHypoxia: An Integrative Database of Protein Expression Dynamics in Response to Hypoxia in Animals	83
Whole Genome Sequence Analysis Revealed Novel Subjective Cognitive Decline-associated Genes in 10,763 Chinese	64
New Metabolic Alterations and a Predictive Marker Pipecolic Acid in Sera for Esophageal Squamous Cell Carcinoma	60
Identify Non-mutational p53 Functional Deficiency in Human Cancers	59
Cell-free DNA Fragmentomics Assay to Discriminate the Malignancy of Breast Nodules and Evaluate Treatment Response	56
Spatial Transcriptomics Unveils the Blueprint of Mammalian Lung Development	56
Opportunities and Challenges in Advancing Plant Research with Single-cell Omics	55
Genomic Perspectives on the Emerging SARS-CoV-2 Omicron Variant	54
Application of Microbiome in Forensics	53
Differential Transcriptomic Landscapes of SARS-CoV-2 Variants in Multiple Organs from Infected Rhesus Macaques	53
Computational Methods for Single-Cell DNA Methylome Analysis	47
Computational Approaches and Challenges in Spatial Transcriptomics	44
Ori-Finder 2022: A Comprehensive Web Server for Prediction and Analysis of Bacterial Replication Origins	44
Multi-Omics Data Reveal the Effect of Sodium Butyrate on Gene Expression and Protein Modification in Streptomyces	42

SuperFeat: Quantitative Feature Learning from Single-cell RNA-seq Data Facilitates Drug Repurposing	39
Integrative Genome-wide Association Meta-analysis of Aortic Aneurysm and Dissection Identifies Five Novel Genes	37
GDBIG: A Pioneering Birth Cohort Genomic Platform Facilitating Intergenerational Genetic Research	36
Gut Microbiome in Colorectal Cancer: Clinical Diagnosis and Treatment	34
ncFO: A Comprehensive Resource of Curated and Predicted ncRNAs Associated with Ferroptosis	33
The Role of N6-methyladenosine Modification in Gametogenesis and Embryogenesis: Impact on Fertility	33
Toward Inclusiveness and Thoroughness: A Paradigm Shift from More-Ever-Omics to Holovivology	32