OOIR: Observatory of International Research

Papers

(The H4-Index of Genomics Proteomics & Bioinformatics is 31. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-12-01 to 2025-12-01.)

Article	Citations
Acknowledgments to Reviewers 2021	463
PSIA: A Comprehensive Knowledgebase of Plant Self-incompatibility	338
PHISDetector: A Tool to Detect Diverse In Silico Phage–Host Interaction Signals for Virome Studies	206
WheatCENet: A Database for Comparative Co-Expression Networks Analysis of Allohexaploid Wheat and Its Progenitors	168
Evaluation of T Cell Receptor Construction Methods from scRNA-Seq Data	104
Global Marine Cold Seep Metagenomes Reveal Diversity of Taxonomy, Metabolic Function, and Natural Products	98
RNase P: Beyond Precursor tRNA Processing	97
Cross-ethnic Molecular Signatures Underpin the Adverse Impact of Statin Use on Type 2 Diabetes	80
Benefits of Better Cardiovascular Health for Calcific Aortic Valve Stenosis Stratified by Polygenic Risk Score	70
OBIA: An Open Biomedical Imaging Archive	66
Dynamic Landscapes of tRNA Transcriptomes and Translatomes in Diverse Mouse Tissues	62
AVM: A Manually Curated Database of Aerosol-transmitted Virus Mutations, Human Diseases, and Drugs	61
Whole-genome Sequence Analysis Revealed Novel Subjective Cognitive Decline-associated Genes in 10,763 Chinese	60
Opportunities and Challenges in Advancing Plant Research with Single-cell Omics	56
New Metabolic Alterations and a Predictive Marker Pipecolic Acid in Sera for Esophageal Squamous Cell Carcinoma	54
DeepCAGE: Incorporating Transcription Factors in Genome-Wide Prediction of Chromatin Accessibility	53
Cell-free DNA Fragmentomics Assay to Discriminate the Malignancy of Breast Nodules and Evaluate Treatment Response	52
iHypoxia: An Integrative Database of Protein Expression Dynamics in Response to Hypoxia in Animals	52
Spatial Transcriptomics Unveils the Blueprint of Mammalian Lung Development	45
Identify Non-mutational p53 Functional Deficiency in Human Cancers	43
Differential Transcriptomic Landscapes of SARS-CoV-2 Variants in Multiple Organs from Infected Rhesus Macaques	41
Multi-Omics Data Reveal the Effect of Sodium Butyrate on Gene Expression and Protein Modification in Streptomyces	39
Integrative Genome-wide Association Meta-analysis of Aortic Aneurysm and Dissection Identifies Five Novel Genes	38
Computational Methods for Single-Cell DNA Methylome Analysis	37
SuperFeat: Quantitative Feature Learning from Single-cell RNA-seq Data Facilitates Drug Repurposing	36

GDBIG: A Pioneering Birth Cohort Genomic Platform Facilitating Intergenerational Genetic Research	35
DBP: Adaptive and Interpretable Factor Analysis for Single-cell RNA-seq Data with Deep Beta Processes	35
NeoAtlas-Tumor and NeoBert: A Database and A Predictive Model for Canonical and Noncanonical Tumor Neoantigens	34
Genomic Perspectives on the Emerging SARS-CoV-2 Omicron Variant	33
Precision and Accuracy in Quantitative Measurement of Gene Expression from Single-cell/nucleus RNA Sequencing Data	33
The Role of N6-methyladenosine Modification in Gametogenesis and Embryogenesis: Impact on Fertility	31
Application of Microbiome in Forensics	31