OOIR: Observatory of International Research

Papers

(The H4-Index of Frontiers in Microbiology is 91. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-05-01 to 2026-05-01.)

Article	Citations
Characterization of Rosculus vilicus sp. nov., a rhizarian amoeba interacting with Mycobacterium avium subsp. paratuberculosis	925
Non-structure protein ORF1ab (NSP8) in SARS-CoV-2 contains potential γδT cell epitopes	827
Editorial: Microbial regulatory mechanisms in remediation of industrial wastewater and contaminated soils	653
Editorial: Morels: physiology, genetics, and interactions with the environment	541
Editorial: Microbial advances towards sustainable environment: Microbiome structure & integrated technologies	491
Mycobiome structure does not affect field litter decomposition in Eucalyptus and Acacia plantations	425
Editorial: Women in infectious agents and disease: 2023	374
Editorial: Cellular nanomotion as a new signature of life	367
Application of transposon insertion site sequencing method in the exploration of gene function in microalgae	348
Genomic surveillance of genes encoding the SARS-CoV-2 spike protein to monitor for emerging variants on Jeju Island, Republic of Korea	311
Evaluation and validation of extensive growth and growth boundary models for mesophilic and psychrotolerant Bacillus cereus in dairy products (Part 2)	297
Cell entry of bovine respiratory syncytial virus through clathrin-mediated endocytosis is regulated by PI3K-Akt and Src-JNK pathways	276
Development and evaluation of a rapid RPA/CRISPR-based detection of Francisella tularensis	247
Structural and biochemical elucidation of class I hybrid cluster protein natively extracted from a marine methanogenic archaeon	233
A global bibliometric and visualized analysis of bacterial biofilm eradication from 2012 to 2022	232
Impact of fasting and refeeding on immune markers, hepatic gene expression, and gut microbiota in geese: insights into metabolic regulation and gut-liver interactions	229
Toxic Factors of Lead and Cadmium Fit in the Ecological Risk Assessment for Microorganisms	228
The Zinc-Finger protein ZCCHC3 inhibits LINE-1 retrotransposition	218
Editorial: New Insights Into the Transmission Dynamics and Control of Antimicrobial Resistance to Last-Resort Antibiotics	203
Campylobacter fetus foodborne illness outbreak in the elderly	202
Editorial: Immunometabolic crosstalk during viral infection	201
Temporal Alignment of Longitudinal Microbiome Data	197
Dysregulated NAD(H) homeostasis associated with ciprofloxacin tolerance in Escherichia coli investigated on a single-cell level with the Peredox [NADH:NAD+] biosensor	188
Physiological variations in hypovirus-infected wild and model long-term laboratory strains of Cryphonectria parasitica	184
Effect of conjugative transfer of antibiotic resistance genes mediated by plasmids on the microecology of different intestinal segments	162

Microbial removal of nutrients from anaerobic digestate: assessing product-coupled and non-product-coupled approaches	161
One-pot biosynthesis of N-acetylneuraminic acid from chitin via combination of chitin-degrading enzymes, N-acetylglucosamine-2-epimerase, and N-neuraminic acid aldolase	157
Mapping the research landscape of immune response in human brucellosis: a bibliometric analysis	155
A computational model for potential microbe–disease association detection based on improved graph convolutional networks and multi-channel autoencoders	152
Reconstruction of the Evolutionary Origin, Phylodynamics, and Phylogeography of the Porcine Circovirus Type 3	150
Genetically predicted the causal relationship between gut microbiota and the risk of polymyositis/dermatomyositis: a Mendelian randomization analysis	147
Exploring the fungal community structure and assembly in different tissues of Gymnadenia conopsea	144
Deciphering of differences in gut microbiota and plasma metabolites profile between non-obese and obese Golden Retrievers dogs	143
A streamlined method to determine the antibiotic resistance of plaque-forming predatory bacteria	142
Structure and function of the topsoil microbiome in Chinese terrestrial ecosystems	142
Editorial: Electromicrobiology—from electrons to ecosystems, volume II	139
The hidden nitrogen nexus: stochastic assembly and linear gene synergies drive urban park microbial networks	135
Editorial: Harnessing natural plant extracts and probiotics to enhance host-gut microbiome interactions	135
Lithic bacterial communities: ecological aspects focusing on Tintenstrich communities	134
Associations of soil bacterial diversity and function with plant diversity in Carex tussock wetland	134
Unlocking plant growth-promoting traits of endophytic actinobacteria isolated from Anacyclus pyrethrum, an endemic medicinal plant of the Aguelmam azegza region, Morocco	133
pH-mediated potentiation of gallium nitrate against Pseudomonas aeruginosa	132
Water-sediment regulation drives stage-specific microbial shifts and network complexity in the Yellow River reservoir-river continuum	128
The development and characterization of a stable Coxsackievirus A16 infectious clone with Nanoluc reporter gene	126
The causality between gut microbiome and liver cirrhosis: a bi-directional two-sample Mendelian randomization analysis	126
The effects of Bifidobacterium animalis QC08 on reducing uric acid level and providing renal protection in mice with hyperuricemia	124
Improvement of halitosis by probiotic bacterium Weissella cibaria CMU: A randomized controlled trial	121
Interactions between halotolerant nitrogen-fixing bacteria and arbuscular mycorrhizal fungi under saline stress	121
How long do pathogens persist and survive in water? A systematic review	120
Fusobacterium nucleatum induces colon anastomosis leak by activating epithelial cells to express MMP9	118
Genomic epidemiology of Streptococcus dysgalactiae subsp. equisimilis strains causing invasive disease in Norway during 2018	117
Assessment of the relationship between gut microbiota and bone mineral density: a two-sample Mendelian randomization study	117
Antibacterial Activity of Two Metabolites Isolated From Endophytic Bacteria Bacillus velezensis Ea73 in Ageratina adenophora	115
Dynamic succession of the quantity and composition of epiphytic microorganisms at different growth stages on rice surface	115
Characterization of bacterial community dynamics dominated by salinity in lakes of the Inner Mongolian Plateau, China	115
2bRAD-M reveals the difference in microbial distribution between cancerous and benign ovarian tissues	114
Lactiplantibacillus argentoratensis AGMB00912 protects weaning mice from ETEC infection and enhances gut health	113
Changyanning regulates gut microbiota and metabolism to ameliorate intestinal injury induced by ETEC K88	113
Application progress of CRISPR/Cas9 genome-editing technology in edible fungi	112
Corrigendum: Understanding the burden of antibiotic resistance: a decade of carbapenem-resistant Gram-negative bacterial infections in Italian intensive care units	110
Microbial carbohydrate-active enzymes influence soil carbon by regulating the of plant- and fungal-derived biomass decomposition in plateau peat wetlands under differing water conditions	109
Fecal microbiota transplantation from Suncus murinus, an obesity-resistant animal, to C57BL/6NCrSIc mice, and the antibiotic effects in the approach	107
Global quantitative proteome analysis of a multi-resistant Klebsiella pneumoniae strain	106
Microbial degradation of aristolochic acid I by endophytic fungus A.h-Fs-1 of Asarum heterotropoides	106
Effects of replacing zinc oxide with different levels of zinc lactate on growth performance, serum indexes, intestinal health and gut microbiota in weaned piglets	105
Effects of different harvesting methods on soil bacterial diversity in Betula platyphylla secondary forest in Daxing 'an Mountains, inner Mongolia	105
Prevalence of multidrug-resistant Escherichia coli isolates and virulence gene expression in poultry farms in Jos, Nigeria	105
Multi-dimensional investigation and distribution characteristics analysis of gut microbiota of different marine fish in Fujian Province of China	105
Distinct effects of a dairy probiotic drink and physical exercise on gut microbiota in pediatric acute lymphoblastic leukemia patients in remission: a randomized clinical trial	104
Soil microorganisms and methane emissions in response to short-term warming field incubation in Svalbard	104
Physiological and comparative proteomic characterization of Desulfolithobacter dissulfuricans gen. nov., sp. nov., a novel mesophilic, sulfur-disproportionating chemolithoautotroph from a deep-sea hyd	103
Formulation of Chemically Defined Media and Growth Evaluation of Ligilactobacillus salivarius ZJ614 and Limosilactobacillus reuteri ZJ625	103
Effects of different foods and cooking methods on the gut microbiota: an in vitro approach	101
Epidemiologic and clinical characteristics of human bocavirus infection in children hospitalized for acute respiratory tract infection in Qingdao, China	101
Geraniol attenuates virulence factors by inhibiting quorum sensing of Pseudomonas aeruginosa	100

Antimicrobial resistance and genetic diversity of Klebsiella pneumoniae strains from different clinical sources in horses	100
Activities of aztreonam in combination with several novel β-lactam-β-lactamase inhibitor combinations against carbapenem-resistant Klebsiella pneumoniae strains coproducing KPC and NDM	100
Large–scale genetic analysis and biological traits of two SigB factors in Listeria monocytogenes: lineage correlations and differential functions	98
Jiangshui-derived lactic acid bacteria with high hypoglycemic potential: functional properties and fermentation performance of Sonchus oleraceus Jiangshui	98
Occurrence and characterization of β-lactamase-producing bacteria in biomedical wastewater and in silico enhancement of antibiotic efficacy	97
Effects of warming and nitrogen addition on soil fungal and bacterial community structures in a temperate meadow	97
Aqueous extract of Sargentodoxa cuneata alleviates ulcerative colitis and its associated liver injuries in mice through the modulation of intestinal flora and related metabolites	95
Feeding systems influence the rumen resistome in yaks by changing the microbiome	94
Gut microbiota is a potential factor in shaping phenotypic variation in larvae and adults of female bumble bees	94
ToLCNDV-ES infection in tomato is enhanced by TYLCV: Evidence from field survey and agroinoculation	94
Global research trends on the associations between the microbiota and lung cancer: a visualization bibliometric analysis (2008–2023)	93
Metabolomic profiling and its association with the bio-efficacy of Aspergillus niger strain against Fusarium wilt of guava	93
Gut and skin microbial dysbiosis correlate with systemic inflammation and pruritus in immunological non-responders	93
The bacterial and fungal microbiomes of ectomycorrhizal roots from stone oaks and Yunnan pines in the subtropical forests of the Ailao Mountains of Yunnan	93
Hyperlipidaemia treatment and gut microbiology	92
Ackermannviridae bacteriophage against carbapenem-resistant Klebsiella pneumoniae of capsular type 64	92
Inhibitory effect and underlying mechanism of cinnamon and clove essential oils on Botryosphaeria dothidea and Colletotrichum gloeosporioides causing rots in postharvest bagging-free apple fruits	91
Molecular mechanisms leading to ceftolozane/tazobactam resistance in clinical isolates of Pseudomonas aeruginosa from five Latin American countries	91