OOIR: Observatory of International Research

Papers

(The H4-Index of Frontiers in Microbiology is 91. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-06-01 to 2026-06-01.)

Article	Citations
Characterization of Rosculus vilicus sp. nov., a rhizarian amoeba interacting with Mycobacterium avium subsp. paratuberculosis	952
Non-structure protein ORF1ab (NSP8) in SARS-CoV-2 contains potential γδT cell epitopes	872
Editorial: Microbial regulatory mechanisms in remediation of industrial wastewater and contaminated soils	669
Editorial: Morels: physiology, genetics, and interactions with the environment	569
Editorial: Women in infectious agents and disease: 2023	510
Editorial: Cellular nanomotion as a new signature of life	449
Application of transposon insertion site sequencing method in the exploration of gene function in microalgae	387
Genomic surveillance of genes encoding the SARS-CoV-2 spike protein to monitor for emerging variants on Jeju Island, Republic of Korea	386
Evaluation and validation of extensive growth and growth boundary models for mesophilic and psychrotolerant Bacillus cereus in dairy products (Part 2)	363
Cell entry of bovine respiratory syncytial virus through clathrin-mediated endocytosis is regulated by PI3K-Akt and Src-JNK pathways	320
Development and evaluation of a rapid RPA/CRISPR-based detection of Francisella tularensis	282
A global bibliometric and visualized analysis of bacterial biofilm eradication from 2012 to 2022	252
Impact of fasting and refeeding on immune markers, hepatic gene expression, and gut microbiota in geese: insights into metabolic regulation and gut-liver interactions	251
Toxic Factors of Lead and Cadmium Fit in the Ecological Risk Assessment for Microorganisms	250
The Zinc-Finger protein ZCCHC3 inhibits LINE-1 retrotransposition	248
Campylobacter fetus foodborne illness outbreak in the elderly	237
Editorial: Immunometabolic crosstalk during viral infection	223
Temporal Alignment of Longitudinal Microbiome Data	212
Dysregulated NAD(H) homeostasis associated with ciprofloxacin tolerance in Escherichia coli investigated on a single-cell level with the Peredox [NADH:NAD+] biosensor	209
Physiological variations in hypovirus-infected wild and model long-term laboratory strains of Cryphonectria parasitica	208
Effect of conjugative transfer of antibiotic resistance genes mediated by plasmids on the microecology of different intestinal segments	201
Microbial removal of nutrients from anaerobic digestate: assessing product-coupled and non-product-coupled approaches	185
One-pot biosynthesis of N-acetylneuraminic acid from chitin via combination of chitin-degrading enzymes, N-acetylglucosamine-2-epimerase, and N-neuraminic acid aldolase	179
Mapping the research landscape of immune response in human brucellosis: a bibliometric analysis	170
A computational model for potential microbe–disease association detection based on improved graph convolutional networks and multi-channel autoencoders	166

Seed transmission of Carlavirus vignae (Cowpea mild mottle virus): a hidden driver of veinal necrosis and bud blight disease in soybean (Glycine max) in India	160
Establishment of a human cell line with a surface display system for screening and optimizing Na+-taurocholate cotransporting polypeptide-binding peptides	156
Is foliar spectrum predictive of belowground bacterial diversity? A case study in a peach orchard	156
Editorial: Last universal common ancestor and origin of life: what uncultivated Bacteria, Archaea, and extremophiles can tell us	154
The antibiotic de-escalation strategy in patients with multidrug-resistant bacterial colonization after allogeneic stem cell transplantation	152
Elucidation of the Bovine Intramammary Bacteriome and Resistome from healthy cows of Swiss dairy farms in the Canton Tessin	152
Ergosterone ameliorates RRR-induced spleen deficiency by gut microbiota-gut metabolites and P38MAPK signaling pathway	146
From cereus to anthrax and back again: Assessment of the temperature-dependent phenotypic switching in the “cross-over” strain Bacillus cereus G9241	146
Unraveling the HIV-malaria interactions: a bibliometric analysis of global research trends and emerging insights	140
Calorimetric measurement of energy and nutrient stimulation of microorganisms from the continental deep subsurface	140
Degradation of switchgrass by Bacillus subtilis 1AJ3 and expression of a beta-glycoside hydrolase	138
Fungal outbreak in the Catacombs of SS. Marcellino and Pietro Rome (Italy): From diagnosis to an emergency treatment	138
The tropical cookbook: Termite diet and phylogenetics—Over geographical origin—Drive the microbiome and functional genetic structure of nests	138
Multi-omics reveals novel forage advantages of Potentilla anserina Linnaeus in high-salt habitats	129
Corrigendum: Combined effects of host genetics and diet on porcine intestinal fungi and their pathogenic genes	128
Isolation and genomic characterization of the plant growth-promoting rhizobacterium GZY0 and its biocontrol potential against soft rot in Amorphophallus konjac	128
Mixed application of microbial fertilizers reshapes the tobacco rhizosphere microbiome and enhances metabolic coordination to improve crop quality	126
Cetobacterium alleviates the lipid accumulation in Nile tilapia (Oreochromis niloticus) induced by leucine addition	126
Comparison of the fecal microbiota of adult healthy dogs fed a plant-based (vegan) or an animal-based diet	126
Temporal proteomic analyses of human lung cells distinguish high pathogenicity influenza viruses and coronaviruses from low pathogenicity viruses	126
Robust anti-tubercular profile of Solanum virginianum extract in enhancing isoniazid bioavailability and curtailing stress tolerance in Mycobacterium smegmatis	123
Roles of CcDFR and CcOMT9 in the cyanidin biosynthesis and development of Cordyceps cicadae	122
Testosterone increases the virulence traits of uropathogenic Escherichia coli	122
Antibacterial activity of novel linear polyamines against Staphylococcus aureus	120
Gut microbiota assemblages of generalist predators are driven by local- and landscape-scale factors	119
Proteogenomic annotation of T6SS components identified in Bacteroides fragilis secretome	119
Biocontrol ability of Bacillus velezensis T9 against Apiospora arundinis causing Apiospora mold on sugarcane	119
Phage therapy against methicillin-resistant Staphylococcus pseudintermedius: a novel strategy for canine pyoderma	118
Virus-specific Dicer-substrate siRNA swarms inhibit SARS-CoV-2 infection in TMPRSS2-expressing Vero E6 cells	117
Profiling of small RNAs derived from tomato brown rugose fruit virus in infected Solanum lycopersicum plants by deep sequencing	113
Bacterial communities associated with ambrosia beetles: current knowledge and existing gaps	111
Effects of different cultivation media on root bacterial community characteristics of greenhouse tomatoes	110
Genetically predicted the causal relationship between gut microbiota and the risk of polymyositis/dermatomyositis: a Mendelian randomization analysis	109
Metabolomics-Driven Exploration of the Antibacterial Activity and Mechanism of 2-Methoxycinnamaldehyde	109
A streamlined method to determine the antibiotic resistance of plaque-forming predatory bacteria	108
Exploring the fungal community structure and assembly in different tissues of Gymnadenia conopsea	108
Deciphering of differences in gut microbiota and plasma metabolites profile between non-obese and obese Golden Retrievers dogs	108
The hidden nitrogen nexus: stochastic assembly and linear gene synergies drive urban park microbial networks	107
Editorial: Electromicrobiology—from electrons to ecosystems, volume II	107
Structure and function of the topsoil microbiome in Chinese terrestrial ecosystems	107
Unlocking plant growth-promoting traits of endophytic actinobacteria isolated from Anacyclus pyrethrum, an endemic medicinal plant of the Aguelmam azegza region, Morocco	105
Lithic bacterial communities: ecological aspects focusing on Tintenstrich communities	105
pH-mediated potentiation of gallium nitrate against Pseudomonas aeruginosa	104
Water-sediment regulation drives stage-specific microbial shifts and network complexity in the Yellow River reservoir-river continuum	104
The development and characterization of a stable Coxsackievirus A16 infectious clone with Nanoluc reporter gene	103
Genomic characterization of Staphylococcus aureus isolated from mastitis in small ruminants in Sardinia, Italy	102
Transcriptionally induced nucleoid-associated protein-like ccr1 in combined-culture serves as a global effector of Streptomyces secondary metabolism	102
Differences in abundance and functional intensity of characteristic microorganisms of tea plant rhizosphere soils contribute to the differentiation of tea quality in different rocky zones	102
Phosducin-like protein PoPlp1 impacts cellulase and amylase expression and development in Penicillium oxalicum via the G protein–cAMP signaling pathway	100
Genomic and phenotypic characterization of two novel human-derived Limosilactobacillus reuteri strains with unique probiotic traits	99

Diet-microbiome coevolution: the core mechanism for semi-aquatic adaptation and cross-habitat niche coexistence of the web-footed shrew (Nectogale elegans)	99
Editorial: Extreme environmental microbial products: Structures, functions, biosynthesis	98
Editorial: Omics techniques in deciphering environmental, industrial and therapeutic applications of microbes	98
Surfactin: a novel Aphis gossypii killing surfactin produced by Bacillus australimaris TRM82479 of Taklamakan Desert origin	97
Gut and skin microbial dysbiosis correlate with systemic inflammation and pruritus in immunological non-responders	97
Identification of ophiostomatalean fungi associated with Tomicus pilifer infesting Pinus koraiensis in Northeastern China	97
Antimicrobial resistance and machine learning: past, present, and future	96
Physiological and comparative proteomic characterization of Desulfolithobacter dissulfuricans gen. nov., sp. nov., a novel mesophilic, sulfur-disproportionating chemolithoautotroph from a deep-sea hyd	95
Antimicrobial resistance and genetic diversity of Klebsiella pneumoniae strains from different clinical sources in horses	94
Jiangshui-derived lactic acid bacteria with high hypoglycemic potential: functional properties and fermentation performance of Sonchus oleraceus Jiangshui	94
Effects of warming and nitrogen addition on soil fungal and bacterial community structures in a temperate meadow	93
Correction: Microbiome-inspired solutions to save human and planetary health	92
Comparison of Anticancer Activities and Biosafety Between Salmonella enterica Serovar Typhimurium ΔppGpp and VNP20009 in a Murine Cancer Model	92
Artificial intelligence-aided rapid and accurate identification of clinical fungal infections by single-cell Raman spectroscopy	92
Activities of aztreonam in combination with several novel β-lactam-β-lactamase inhibitor combinations against carbapenem-resistant Klebsiella pneumoniae strains coproducing KPC and NDM	91
Hyperlipidaemia treatment and gut microbiology	91